Bany000746.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- bab1
- Assembly
- GCA_947172395.1
- Location
- OX359204.1:3130575-3135810[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-17 1e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 3 4.6 3.1e+03 -1.8 1.6 6 15 167 176 163 178 0.83 3 3 3.7 2.5e+03 -1.5 0.0 10 18 278 287 273 288 0.63
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAGAGCATCGTGCACAATCTGAGGTTCCGCGAGCGCGGGCCGCTGAAGTCCTGGCGCCCGGAGACCATGGCTGAGGCCATATTCTCTGTTCTGAAGGAAGGGCTCTCACTGTCGCAGGCTGCGAGGAAATACGACATTCCGTACCCGACATTTGTGCTGTACGCTAACAGAGTCCACAACATGCTGGGCCCGAGCGCGGACGGTGGTGCAGATCTGAGACCCAAAGGTCGCGGGCGGCCGCAGCGCATTCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGCGCCGTCGTGTTCCGCGACTCGCACGCCGCGCACGCCGTGCACGCCTCGCACCACATCAAGGAGGAGGTGCTCCCCGTCTACCCTGCGATCACGGACGGCATGACCTCGGTGCAGAACGCCTACCCGGTGGCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCGCCCAACGCCGCGGCAGCCGCCGCCGTGGCCGCCGTGGCGCACGGGCTGCGCCGCCAGATGTGCAACATGGTCGTGGCCGCGCAGAGGCCGCCCGACCACCCGGTGCACCTCGGCCTGCCGCCGATGCCCATGCAGTCACCGCGGTTGCCATCGCCGCGCCTGCCGTCGCCGCTCACGGCCGGCTCGGAGTCGCCGCTGTGCTCGCCGCCGCCGCCGGGCCACGCCCTCGAGCCGCCGAAGCCCACCGACCCGTTCCGACCCTTCGCCTCGCCGCGCCCTGACAGCCGCTACAGCGACCGCGACGTCGTCGCCGACATGACCGACATGGGACCGCCTAAAACTCCGATTTCGATGGTGAAGAACGGCAAGGAGATGTCGCTGCCGGTGAAGATGGAGCTGCCGCCGGCGGAGGCGCGCGCGGAGAACATCTGA
- Protein Sequence
- MWQKCWNTNQSIVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHAAHAVHASHHIKEEVLPVYPAITDGMTSVQNAYPVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPVHLGLPPMPMQSPRLPSPRLPSPLTAGSESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYSDRDVVADMTDMGPPKTPISMVKNGKEMSLPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_01021111;
- 80% Identity
- -