Mach030282.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000031.1:2350739-2354110[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.13 11 7.5 0.6 1 23 72 95 72 95 0.92 2 18 0.0047 0.42 12.0 3.1 2 23 167 188 166 188 0.97 3 18 1.2 1.1e+02 4.4 0.8 1 17 192 208 192 214 0.84 4 18 0.12 10 7.6 0.9 1 23 219 242 219 242 0.96 5 18 0.2 18 6.9 5.4 1 23 249 272 249 272 0.95 6 18 0.0091 0.82 11.1 0.9 2 23 280 302 279 302 0.96 7 18 0.0074 0.67 11.4 3.4 1 23 308 330 308 330 0.97 8 18 7.6e-05 0.0069 17.7 1.8 1 23 336 359 336 359 0.98 9 18 0.28 26 6.4 2.7 1 19 365 383 365 388 0.80 10 18 0.27 25 6.5 0.1 3 23 454 475 452 475 0.89 11 18 9.3 8.4e+02 1.7 0.2 3 23 502 523 500 523 0.88 12 18 0.9 81 4.8 0.2 2 23 546 567 545 567 0.93 13 18 0.00071 0.064 14.6 0.1 1 23 571 593 571 593 0.96 14 18 5.6e-08 5.1e-06 27.5 0.7 1 23 598 621 598 621 0.98 15 18 0.00065 0.059 14.7 1.4 2 23 659 681 658 681 0.96 16 18 3.3e-05 0.003 18.8 1.8 1 23 687 709 687 709 0.98 17 18 1.7e-05 0.0015 19.7 1.0 1 23 715 737 715 737 0.99 18 18 0.00017 0.015 16.6 3.3 1 23 743 766 743 766 0.97
Sequence Information
- Coding Sequence
- atgcttttcGTTGTAGGTGTGCCACGTAAAACTTCAGACAAACAAGAGCGCTCGAAAGCGAGACCAAAGAAAGATCCACTCGAGAAAACTAACAAGAAAGATAACATACCGAGAGTGAGACAGGGAGAACAGCTAGAGAAACATCGGACAAACATAAGAGAAATAATCCAATGGTCTAACGCAACCCCGATTCGCTGCCGCGGCGGAATCGGTTACGCTTGTTGCTTCTGCACAGATCAATTCCCAGATCCCGCAGACTTGAAGAAGCACACGATAGAAATGCATGACGAAGAAACAAAATCAACATTCATGAAAGGAAAAGACATGTATGGGTATCTAGTGAAAGTCGATATCACAGGGTTACAGTGCAAACTTTGCGGCGATGACGTTGAAACACTCGAAGATATCATGGATCACCTCAAGGGCGTTCACGACAAAAATATCAGCACTAACATACCCAACCACATACTACCCTTTAAATTCGACAATGAGAACCTTAGGTGTTTCATGTGCCAGAACGTATTCAACAGATTCAAAGCACTACAAGAACACATGCACACGCATTACAGAAATTACCTTTGCGAGGTCTGCGATGCTGGATTTGTGAACCGCCATCTCCTTCTATGCCATAACGAAGGGCATAAAGTCGGCGTGTTCGCCTGCGAGCAATGTGACGACGTTTTCGACACGTTGAGAAAGAAGAAACTGCATCAACGAAAGATTCACGATGGAATGAACAAGCCGCATAAGTGTGGATACTGCGACGAGCGGTTCAAAGAGAACTGCCATAAAATCGAGCACCTAGCGAAAGTTCATGGGGTAGTTGGGCCGTTAATAAAGTGCCAGGCGTGCGACCGGACATTCGCAACGCAACAGACTTGGTTGCTGCACACGAAGAAGTATCATTTGATGCAGAGGCAACACAAGTGCACCAGATGCGAAATGGATTTCTTTTCGAAGCGCGAACTAACAGATCATATGGTAAAGCACACTGGGACGAGGGCGTATAGATGTGAGATGTGTTTCAAGTCGTATGGAAGATTAAAAACGCTGAAGGAACATATACGAAGGCTTCATCCGGAAGAGAGGAGGTTCAAATGCGTAGATTGTGGACAGTCGTTTGATAAACATTTAGCTTTGAAGTGTCACGTGAGTGCAAAACATGGCGACAATAGTACGCGTACACGAACGATAAAAATAGAAAGAGGGATTTCCAAACCTCGCGTGGAGCTGAAGATCGTACGCAATCATAAAGACTCGTATCAGTCCGAGGCCAAGAAAAACCAACAGAATCTCAGAACGATCTTGCTGAACTCAAACGCGAACCCCATTAGGAGTAAAGACAGCCTCGGTTACGGTTGCGCGTTCTGTCCGGAGCAGTTTCCTGCGCCGACTGATCTAAAAAAACATTTCCTGGACGAACACAACAATGATAAACTAATAAAAGTCATGTCCAGTAAACTCTTTGAGCACGTTGTTAAATTGGACATCACGTATTTGAACTGCGCGCTCTGCACTAGCGATATAACGAAGCTTGAAGACCTTATGACGCACCTAAAGAATGATCACGGAAAGGAAATATATTTGGACATAAAGAGTGCGATTGTTCCTTTTAAATTTGACACGCTGGAACTGCGATGCGCAGTCTGCTCAGCGGAGTATCTGAACTTCAAACTTTTACAGGAGCATATGAATTCCCATTTCGGCAATTACATATGTCCAGTTTGCGGTAGAGGTTTTATGACTGAACGTCTCCTTAGCACACACGTAGGAAGACATAAAAATGGCGAATACAAATGCGAAGATTGTGGAAAAGTATTTGGTAATAAGGCAAATTTAAGAGAACACCAGAAACGTACACATTTGGGTTTGAGCAAACGGAATAAGTGTATGGTGTGTAATGAAAGGTTCTTAGATTATTGGAAGAAGGTCGACCATATGGTGAAGATTCACGGAGCGCCGGCCGTGGTGATAAAATGTCAAGCTTGTGACCGCACTTTTCAGAATCAGAGGGCTTTGTCCAGGCACACGAAAAAAGACCATTTGTTGGAAAGGAAACATAAATGCGCGGAGTGCGAAATGCGGTTCTTCAGTGCCAGCAGCTTGCAGCGGCATATGGCGAAGCACACTGGCTTGCGACAGTTTAGATGCGACGTCTGTTTCAAAGCATATGGAAGGAAGAACACATTAAGGGAGCATATGAGGATACATGCTGATGATCGCAGATTTGCTTGTGCGCACTGCGGACAGGCGTTTGTTCAGAAATGCAGCTGGCGCAGTCACATGCGCTCAAAACATGGGGAAGAGATGTAA
- Protein Sequence
- MLFVVGVPRKTSDKQERSKARPKKDPLEKTNKKDNIPRVRQGEQLEKHRTNIREIIQWSNATPIRCRGGIGYACCFCTDQFPDPADLKKHTIEMHDEETKSTFMKGKDMYGYLVKVDITGLQCKLCGDDVETLEDIMDHLKGVHDKNISTNIPNHILPFKFDNENLRCFMCQNVFNRFKALQEHMHTHYRNYLCEVCDAGFVNRHLLLCHNEGHKVGVFACEQCDDVFDTLRKKKLHQRKIHDGMNKPHKCGYCDERFKENCHKIEHLAKVHGVVGPLIKCQACDRTFATQQTWLLHTKKYHLMQRQHKCTRCEMDFFSKRELTDHMVKHTGTRAYRCEMCFKSYGRLKTLKEHIRRLHPEERRFKCVDCGQSFDKHLALKCHVSAKHGDNSTRTRTIKIERGISKPRVELKIVRNHKDSYQSEAKKNQQNLRTILLNSNANPIRSKDSLGYGCAFCPEQFPAPTDLKKHFLDEHNNDKLIKVMSSKLFEHVVKLDITYLNCALCTSDITKLEDLMTHLKNDHGKEIYLDIKSAIVPFKFDTLELRCAVCSAEYLNFKLLQEHMNSHFGNYICPVCGRGFMTERLLSTHVGRHKNGEYKCEDCGKVFGNKANLREHQKRTHLGLSKRNKCMVCNERFLDYWKKVDHMVKIHGAPAVVIKCQACDRTFQNQRALSRHTKKDHLLERKHKCAECEMRFFSASSLQRHMAKHTGLRQFRCDVCFKAYGRKNTLREHMRIHADDRRFACAHCGQAFVQKCSWRSHMRSKHGEEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01507443; iTF_01092316; iTF_00802152; iTF_00642562;
- 90% Identity
- -
- 80% Identity
- -