Mach016542.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho achilles
Gene Symbol
-
Assembly
GCA_947086495.1
Location
CAMTZB010000016.1:7866266-7880910[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0001 0.0091 17.3 0.1 3 23 129 149 128 149 0.97
2 17 3.2e-06 0.00029 22.0 1.2 1 23 155 177 155 177 0.99
3 17 5.7e-06 0.00052 21.2 2.7 1 23 183 205 183 205 0.99
4 17 4.1e-06 0.00037 21.7 1.7 1 23 220 242 220 242 0.98
5 17 5.2e-05 0.0047 18.2 3.1 1 23 257 279 257 279 0.98
6 17 0.00016 0.015 16.6 2.8 1 23 298 320 298 320 0.98
7 17 4.5e-05 0.004 18.4 0.1 1 23 327 349 327 349 0.99
8 17 1.1e-05 0.001 20.3 2.1 1 23 355 377 355 377 0.99
9 17 0.037 3.3 9.2 1.8 1 23 384 406 384 406 0.98
10 17 6.2e-07 5.6e-05 24.2 2.3 1 23 412 434 412 434 0.99
11 17 0.043 3.8 9.0 1.8 1 23 441 463 441 463 0.98
12 17 2.5e-06 0.00023 22.3 1.5 1 23 469 491 469 491 0.99
13 17 0.00048 0.043 15.2 0.7 1 23 498 520 498 520 0.99
14 17 2.8e-06 0.00025 22.2 1.9 1 23 526 548 526 548 0.98
15 17 0.002 0.18 13.2 0.3 1 20 554 573 554 576 0.93
16 17 3.8e-05 0.0034 18.6 1.3 2 23 583 604 582 604 0.96
17 17 3.6e-06 0.00032 21.8 1.4 1 23 610 633 610 633 0.97

Sequence Information

Coding Sequence
ATGTTCGAACAGCAGATCAAGGCTGAGCCTATGAGCTTTTACACACATCCCCATATAAATACCGGCCCCCCGACGATAATTCGTTCAGACTCAAACCAAGGCATCATCAGCATGAACCCACTCCACCAGCAAGAGGATTCGAAGGACAGTCTCATAGTACAACATCAAGTACACCAACAGGAGCTGCTGGAACAGCACCAACAGGAATTGCAACATGACGATGAAGTAGATAATCTTAGCTTCAAAGGCATGGACGATGAAGGTGTTGAATTGGATATGGACGGTCGACAGTGTTCTCAGGGTATGGGAGTAGATATGGGATCAATTCAAACAAAAATGGAAGTAGCGAATGGACAAGGAATACCACGATCCAAACCACAAGCCTGTAAGGTTTGTGGTAAAGTTCTATCATCTGCCTCGTCGTACTATGTACATATGAAGCTTCATTCGGGAAATAAACCCTTCCAATGCACTGTTTGTGAGGCAGCGTTCTGCCGCAAACCGTACCTTGAGGTACATATGCGCACGCACACCGGCGAGCGGCCCTTCCAGTGCGACTTGTGTCTCAAACGCTTTACGCAGAAGTCTAGCCTCAATACGCACAAACGCGTCCACACCGATGAGCACATGCGCGCGTTGATGGTGAAGGAGCGGCCCTACGAGTGTGAGCTCTGTCAGATGCGCTTCACGCAGAGCTCCAGCCTGAACAGACACAAGAAAATTCACACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACACGGAAAAATACACACCGGTAGGCTATTTGCCCTAAAATCCTTTAGTAGACAATCAAGCGAGCGGCCCTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGTGCAAGGGCGACCTTACACGTGCGGGCAATGCCCCGCGGCGTTCGCCCGGCGCCCCTACCTGGACATTCACATGCGCACGCATACAGGCGAGCGGCCCTATCAGTGCGACGCGTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAACGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATATCTGGAGATACACACGCGAACGCACACCGGCGAGCGACCGTATCAATGTGACATCTGCCTCAAGCGGTTCACACAGAAGTCCAGTCTCAACATTCACAAACGGACGCACTCAGTGCAAGGCCGGCCCTTCCAGTGCTTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACCGGCGAGCGGCCCTACCAGTGTGATGTCTGTCTCAAAAGATTCGCGCAAAAATCTACTCTAAACATACACAAAAGAACGCACACGGTCCAAGGGCGGCCGTATCAGTGCATGGAGTGCCCGGCGGCGTTCACTTGCAAGCCGTACCTGGAAATACACATGCGCACGCACACAGGCGAGCGGCCCTTCGAGTGCGATGTCTGTTACAAACGCTTCACGCAGAAATCTACACTCAACATTCACAAGCGAATTCACACCGGAGAACGTCCATACGCATGTGATATTTGCCAAAAACGGTTTGCGGTGAAGAGTTACGTAACAGCGCACAGGTGGTCGCACGTGGCGGACAAGCCGTTGAACTGCGAGCGGTGTTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACTCCAGCGGGCCGTGCTACGAGTGCAGCGTGTGCGGGCGGACGTTCGTGCGCGACAGCTACCTCATACGGCACCACAACAGGGTGCATCGTGAGAACCATAGCAACGTATCGGCCAACAGCATCGGCACCATAACGAGCGTCGGCAACCCCAACAACTCAAACAATGGGAACTACGACTCACCCGGCGTATGCGACCTTAGttttgtgcCAATGGTGAATCGCTACATGACGTCTCAAGGGACGCAGGTGTCGATGCAGGATACGCAAACCAAAATGTCCGCCATGTCGCCCCAATCCATTGCCTCTATTTCTTCTCCGCCGCCGCCGCACACGCCCACGCCGCAGCCTCAGATGACAATGCGCCTCGCCGATTGA
Protein Sequence
MFEQQIKAEPMSFYTHPHINTGPPTIIRSDSNQGIISMNPLHQQEDSKDSLIVQHQVHQQELLEQHQQELQHDDEVDNLSFKGMDDEGVELDMDGRQCSQGMGVDMGSIQTKMEVANGQGIPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCEAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYECELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTGRLFALKSFSRQSSERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPYTCGQCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHSSGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTITSVGNPNNSNNGNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQTKMSAMSPQSIASISSPPPPHTPTPQPQMTMRLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01092281;
90% Identity
iTF_01018753;
80% Identity
-