Mpha016015.1
Basic Information
- Insect
- Monomorium pharaonis
- Gene Symbol
- grn
- Assembly
- GCA_013373865.1
- Location
- CM023798.1:10658341-10760341[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 7.2e-16 58.3 4.7 1 35 274 307 274 308 0.98 2 2 6.6e-18 2.6e-14 53.3 5.6 1 35 328 361 328 362 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCGCCAGGACGTGGTACGAAACGCCTAGGTCGTTGGAGCCGCCTTCAGGGGGTGCCGGAGTCGCCGGAGTGGTCGGCAACGATTACAGGGGTTACTACCCTCATGCCGGTCCTACGGCGCATCACCCCGCAGCTGCGGCCCACTACGCCCATACAAGGATGTCGAGCAGCGGCGTGTCGAGCGGTCCAGTGAGCCAGGTCTGCCGGCCGCACTTCCACAGCTCGGTTCTCCATCCGTGGCTGTCCGGCAGCAGCGCGGACACCTCGAAGACACCCTGGGGATTCCCAACGACGGCGACCACGGGCGGCACGGTGAACGACGAGAAGCCGCAGAGTCCCCTGGGATCCTCGCTGCCGCCGACGAGCGGGAGCCTGTCGAGTCACGGTGGCGGCCACCACCTCTTCTCCTTCCCGCCGACACCGCCCAAGGACGCTACGCCCGACAGTATAACCGCGAGCACGACCTCCAGCACGAACAACAACAACTCGACGAGCGccaacaacaacaacagcgGCGGTAATCCGCTGTCCGGGTTGGGCGGCGGTACTACCAGCGAGTACCAAGCGGCGGTCGCCCATGCGGCGGTGATGGGCGCGTTCATGCACCATCAGGACGCGCTTGGGGCATCCGGTGGCAGCTCGTGCGACATCAAGCCGACGGTAATGCTCGGCCATCATCACGGGGCGCCCTCGCCGCCGCATCAGCAGCACAACGGCTCGAACAACGGCAGCAACGGTCCCGCCGGCACGAACGGCTCGTCCGCCGGCCAGGTGAAGCAGCGAGAAGAGGGTCGCGAGTGCGTGAATTGCGGCGCCACATCGACACCCCTTTGGAGACGGGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGGCTTTATTACAAGATGAACGGCCAGAATCGACCCCTCATCAAGCCGAAACGACGCCTGAGTGCGGCGAGACGGGCGGGCACCAGCTGCGCCAACTGCAAGACGGCCACGACGACCCTCTGGCGGAGGAACCAGGCCGGCGAGCCGGTCTGCAACGCTTGCGGGCTCTACTACAAGTTGCACAACGTGAATCGGCCGTTGACGATGAAGAAGGAGGGCATCCAAACGAGAAACAGGAAGCTCTCGTCGAAAAGTAAGAAGAAGAAGGCCGGCGGCTGCTTAGGCCTCGGCGGTGTCATGGGCGACATGATCAAAGCCAGTGGACACCTTGATCTCGACAACAAGCCCTTCCATTCGGGATTCGGATCGCCGATGGGTACGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAGGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCGCATTCGCATTCCCATTCTCATCACATGACGAGTCTTCAGGGTCTGCAGCTGGCGGCCACGACGAACGCAATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSARTWYETPRSLEPPSGGAGVAGVVGNDYRGYYPHAGPTAHHPAAAAHYAHTRMSSSGVSSGPVSQVCRPHFHSSVLHPWLSGSSADTSKTPWGFPTTATTGGTVNDEKPQSPLGSSLPPTSGSLSSHGGGHHLFSFPPTPPKDATPDSITASTTSSTNNNNSTSANNNNSGGNPLSGLGGGTTSEYQAAVAHAAVMGAFMHHQDALGASGGSSCDIKPTVMLGHHHGAPSPPHQQHNGSNNGSNGPAGTNGSSAGQVKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520645;
- 90% Identity
- iTF_00182322; iTF_01477971; iTF_00015734; iTF_01122759; iTF_01523721; iTF_01477258; iTF_01270869; iTF_01077851; iTF_00452908;
- 80% Identity
- -