Nful001562.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- grn
- Assembly
- GCA_005281655.1
- Location
- NW:696749-765026[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 4.5e+03 -2.9 0.1 7 18 7 18 6 20 0.78 2 3 1.7e-19 3.4e-16 58.2 4.7 1 35 282 315 282 316 0.98 3 3 5.9e-18 1.2e-14 53.3 5.6 1 35 339 372 339 373 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCACCGCTAGATGGTACGAGCCGCCTAGGTCGACGCTGGAGCCGCCTTCGGGGGGCGCCGGGGTGGCCGGGGTGGTCGGCAACCCCACCGACTACAGGGGTTACTATTCCCACGCCGGACCGACGGCGCATCACCCCGCAGCCGCGGCCGCACACTACGCCCACACAAGGATGTCGAGCAGCGGCGTGTCGAGCGGTCCGGTGAGCCAGGTCTGCCGGCCGCACTTTCACAGCTCGGTTCTCCATCCGTGGCTGTCCAGCAGCAGCGCGGACACCTCGAAGCCCTGGGGATTCCCTACGACGGCGACCACGGGCGGCGCCGTGAGCGACGAGAAGCCACAGAGTCCGCTGGGATCCTCGCTGCCGCCCACCACTGGAAGTCTGTCGAGTCACGGTGGCGGCGGCGCCGGCCACCATCTCTTCTCCTTCCCGCCGACGCCGCCCAAGGACGCTACGCCCGATAGCATAACCGCGAGCACGACCTCCAGCAcgaacaacaacaacaacaactcGACGAGCGCCAACAACAACAATAACAACAGCGGCAACCCGCTGTCCGGTCTGGGCGGCGGCGCCGCCAGCGAGTACCAGGCGGCAGTCGCGCACGCGGCGGTGATGGGTGCGTTCATGCACCATCAGGATGCATTAGGAGCGTCCGGTGCCGGCTCGTGCGACATCAAGCCGACGGTGATGCTCGGTCATCATCACGGGGCGCCCTCGCCGCCGCATCAGCAGCACAACGGTTCCAACAACGGCAGCAACGGACCCGGCACGAATGGTTCATCCGCCGGCCAGGTGAAGCAGCGAGAAGAGGGTCGCGAGTGCGTGAATTGCGGTGCTACTTCGACGCCGCTCTGGAGACGGGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGGCTCTACTACAAGATGAACGGCCAGAATCGACCCCTCATCAAGCCGAAACGACGCCTGTCGCTGCAGAGTGCGGCGAGACGGGCAGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACTCTCTGGCGAAGGAATCAAGCGGGCGAACCTGTCTGCAACGCTTGCGGACTCTACTACAAGCTGCACAACGTGAACCGGCCATTGACGATGAAGAAGGAGGGCATCCAGACGAGAAATAGGAAGCTCTCGTCAAAGAGCAAGAAAAAGAAGGCCGGCGGCTGCCTGGGCCTCGGTGGTGTCATGGGCGACATGATCAAGGCCGGTGGACACCTTGATCTCGACAACAAGCCCTTCCATTCCGGATTCGGCTCGCCGATGGGTACGTCCCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAGGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCGCATTCGCATTCCCATTCCCATCACATGACGAGTCTTCAGGGTCTGCAGCTGGCCACGACGAACGCGATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSTARWYEPPRSTLEPPSGGAGVAGVVGNPTDYRGYYSHAGPTAHHPAAAAAHYAHTRMSSSGVSSGPVSQVCRPHFHSSVLHPWLSSSSADTSKPWGFPTTATTGGAVSDEKPQSPLGSSLPPTTGSLSSHGGGGAGHHLFSFPPTPPKDATPDSITASTTSSTNNNNNNSTSANNNNNNSGNPLSGLGGGAASEYQAAVAHAAVMGAFMHHQDALGASGAGSCDIKPTVMLGHHHGAPSPPHQQHNGSNNGSNGPGTNGSSAGQVKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKAGGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520645;
- 90% Identity
- iTF_01016211;
- 80% Identity
- -