Tzet008401.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- grn
- Assembly
- GCA_001594055.1
- Location
- NW:157183-255024[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 2.5e-16 58.3 4.7 1 35 273 306 273 307 0.98 2 2 5.8e-18 8.9e-15 53.3 5.6 1 35 330 363 330 364 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCGCTAGGACATGGTACGAGACGCCTAGGTTGGAGCCGCCTTCGGGGGGTGCCGGGGTGGCCGGAGTGGTCGGCAACGATTACAGGGGTTACTACCCTCACACCGGACCGACGGCGCATCACCCCGCAGCTGCGGCCCACTATGCCCACACGAGGATGTCGAGCAGCGGCGTGTCGAGCGGTCCAGTGAGCCAAGTTTGCCGGCCGCACTTCCACAGCTCGGTTCTCCATCCGTGGCTCTCCGGCAGCAGCGCGGACACCTCGAAGACACCCTGGGGATTCcccgcgacgacgacgaccacGGGCGGCGCTGTGAACGACGAGAAGCCGCAGAGTCCCCTGGGATCCTCGCTGCCGCCTACCACCGGAAGTTTGTCGAGTCACGGTGGCGGCGGTCACCATCTCTTCTCCTTTCCGCCGACACCGCCCAAGGACGCTACGCCTGATAGCATAACCGCCAGCACGACCTCCAGCACGAATAACAACTCCACGAGCGCCAATAACAATAATAGCGGTAATCCTCTCTCCGGGTTGGGCGGTGGTACTACCAGCGAGTATCAAGCGGCGGTCGCTCACGCGGCGGTAATGGGCGCGTTTATGCACCATCAAGACGCGCTAGGCGCATCCGGTGCGAGCTCGTGCGACATCAAGCCGACGGTGATGCTTGGGCACCATCACGGAGCGCCCTCGCCGCCACATCAGCAACACAACGGTTCCAACAACGGCGGCAATGGTCCTGGCGGCACGAACGGCTCATCCGCCGGCCAGGTGAAGCAACGAGAAGAGGGTCGCGAGTGCGTGAATTGCGGCGCCACATCGACACCCCTTTGGAGACGAGACGGCACTGGCCATTACCTCTGCAACGCTTGCGGGCTTTATTACAAGATGAACGGTCAGAATCGACCTCTCATCAAGCCGAAACGACGACTGTCGCTGCAGAGTGCGGCGAGACGGGCGGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACCCTCTGGCGGAGGAATCAGGCCGGTGAGCCAGTCTGCAACGCTTGTGGGCTCTACTACAAGTTGCACAACGTGAACCGGCCGCTGACGATGAAGAAGGAAGGTATCCAAACGAGAAACAGGAAGCTCTCGTCGAAAAGCAAGAAGAAAAAGGCTGGCGGTTGCCTAGGTCTCGGTGGTGTCATGGGCGACATGATCAAGGCCAGTGGACACCTTGATCTCGACAACAAGCCCTTCCATTCAGGATTCGGATCGCCAATGGGTACGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAGGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCACATTCGCATTCCCATTCTCATCACATGACGAGTCTTCAGGGTCTGCAGCTGGCGGCCACGACGAACGCAATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSARTWYETPRLEPPSGGAGVAGVVGNDYRGYYPHTGPTAHHPAAAAHYAHTRMSSSGVSSGPVSQVCRPHFHSSVLHPWLSGSSADTSKTPWGFPATTTTTGGAVNDEKPQSPLGSSLPPTTGSLSSHGGGGHHLFSFPPTPPKDATPDSITASTTSSTNNNSTSANNNNSGNPLSGLGGGTTSEYQAAVAHAAVMGAFMHHQDALGASGASSCDIKPTVMLGHHHGAPSPPHQQHNGSNNGGNGPGGTNGSSAGQVKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520645;
- 90% Identity
- iTF_01016211;
- 80% Identity
- -