Mpha014570.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Monomorium pharaonis
Gene Symbol
Hr39
Assembly
GCA_013373865.1
Location
CM023795.1:2189752-2193944[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.79 1.2e+04 -4.0 7.8 123 163 35 67 17 98 0.55
2 5 0.35 5.4e+03 -2.8 5.7 73 163 303 393 242 405 0.62
3 5 2 3.1e+04 -12.5 16.3 59 160 383 494 360 533 0.51
4 5 3.8e-08 0.00059 20.1 0.0 1 21 603 623 603 630 0.92
5 5 1.3e-70 2e-66 225.9 0.1 183 408 773 992 736 992 0.89

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGTTCGGATTCAACCTGGTGGCCGAACGCGCAGTCTTGGAAATCGTCAGCGACCGCCTCGTCGTCGACTCCCACTTCGGCGACGGGTTCAGCGTCCGTCTCTGTCTCCTGCTCCGCGTCCAGCTCGTCCTCGACGAGTTCCTCCACCTCGACCAACTCGTCCGCGACTTGTTGCCCCTCGTCCTGCATCGGCGTGTCCTGCACGATGAGCCCGAGTCGTTCCACGGAAACGGGGAAAAACGTGTCCGTCACCACTATTAACGTACCGCCGAACCAAGAAATGCATGACGGCAAAGGGGTATGTAAATATCTCGGAGGACAGAATGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGTGGAAATGCGAATGCCGTTCCGACGAGTGGAATCTGCACGAATACGGGGCCGCATAGTATCGGTATCGGAATCGGCGGCATCCTCGCCGCGAACGCGGCGGACATCGACGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATCGACTTTAGAGGTGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAGATCGGTGACGGCGATGCAAACGGCGACGGCGGGGGATGCTGCGATGACAATTCGCAACAGCAACCCGAGAGGCCTATGTCGTGGGAGGGTGAACTGTCGGATCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCACAACGAGGAAATGTCTATGGAAGGAGTTCAAGTGTGCAGTACGAGTCCAGGGCCCATGGAACAGAAGTTCCCTATTAAATCGGAGCCGGATTTTCGATCTAGCCCAGGTTTCGCAATAGGATCCTTTCACGACGGTAGCTTGCCTATGACGCACAGTCAACAACttcagcaacagcagcagcagcaacgtGGTATCGAAAACCTTGAACAGACTCAGCAGAGTGATCTACCGCTTCTCGTAGGCAAGCTTCTCGGCGGATACAACAACTCAACACCTAATCACAGTCCTGTTCTCAATCCGCGGCATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTACAGCGTCTTCAGTTCACCGACACAGAGTCCCCATGCGGCACGGCATTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCTTCGTCGTTGTCCCTCTCTCGACACAGCTTCAACAACTCAACTTCCTCGTTATCTTTATCGCTGTCGCATTCGCTTTCAAGGAACAATTCTGACGCTTCCAGTAGCTGCTACAGTTACGGCTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAACCAAGACATCCGCATTCGCACTCGCAACATCATCAAGTTGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCCGCAGTTGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGCTCGGAACTGTCGCCGGACGGCCATCCCGTTGCGGAGGATCAAGAAGACTGTAGGATACCCTCGGCGCCGTCGGGTATCTCTACCAGGCAACAACTGATAAATAGTCCTTGCCCGATTTGCGGTGATAAGATAAGCGGCTTCCATTATGGTATCTTTTCGTGTGAATCGTGCAAGGGATTCTTCAAGCGCACCGTCCAGAATCGTAAGAACTATGTGTGCCTTAGAGGAGCAGGTTGTCCGGTCACTGTGGCCACGAGAAAAAAGTGCCCGGCCTGTCGCTTTGATAAGTGCCTCAACATGGGTATGAAACTTGAGGCGATCAGGGAGGATCGTACTAGAGGCGGTAGAAGCACTTATCAGTGTACCTATACTCTACCAGCGAATCTCGTTGGTAGTCCTGCTGGCGGTATGACTGGTGAAAAACTGACAACAGCGGGCAATTGTAGCCCAGCACCAGCTGGTAGCGAGCACCATTATTCCATTAGATATCATTCGAATCATTCTCACAAGATGCAAGTAGTACCTCAACTTTTGCAAGACATTATGGATGTGGAACATCTCTGGTACTATAATGACAATGATCGGATGAGCGGCAGTGGAGGAATATTTGGAAGTGCAAGGAATACCGGTGGTGATAGTATGCTCGGTGGACTCGGAAGTGGCCCGGCGGCCAGCGGAACTGCGGTTGGCATTGGCGCAGGAAACAACGGAGGTGTAGTGGAATGTTCGTCGAATGACTCTAGCAATGTCGATACTAATAGCAGAAGGGAGACGGCGAGCCCAGCCAATTCAACTTTAACGGGGGCATCCGATCAACATTCCACTAATGGCAATACTACCAATAATAGTAATTCTCAAATTGTCAATAATTCCAATGGCAATTCAGCGCAGCATCCGGactttttatctaatttgtgCAACATTGCGGATCATCGGCTTTATAAGATCGTCAAGTGGTGCAAGAGTTtgccattatttaaaaatatctcgatCGACGATCAAATTTGTTTGTTGATCAACTCTTGGTGCGAACTACTACTTTTCTCCTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTTGGCAAGTCGATTACTTTGGAACAAGCGAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCGATAATCTGCGAAGGCTGAGAGTAGATCGATACGAATATGTTGCAATGAAGgtaATCGTGCTGTTAACGTCTGATACAAGTGAATTAAAAGAGCCTGAAAAGGTCAGAGCCTCTCAAGAAAAGGCCCTTCAAGCACTGCAGCAGTACACAATCGCGAGGTATCCAGAATTACCCGCCAAATTTGGTGAATTATTATTGAGAATTCCAGATTTGCAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGTGCTGAGGGGGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGSDSTWWPNAQSWKSSATASSSTPTSATGSASVSVSCSASSSSSTSSSTSTNSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEEMSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFAIGSFHDGSLPMTHSQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQVAQGSPLHLPASSAVAAHHYSSSSVPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTGEKLTTAGNCSPAPAGSEHHYSIRYHSNHSHKMQVVPQLLQDIMDVEHLWYYNDNDRMSGSGGIFGSARNTGGDSMLGGLGSGPAASGTAVGIGAGNNGGVVECSSNDSSNVDTNSRRETASPANSTLTGASDQHSTNGNTTNNSNSQIVNNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLRVDRYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPELPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_01015921;