Malt019151.1
Basic Information
- Insect
- Monochamus alternatus
- Gene Symbol
- bab2
- Assembly
- GCA_037114965.1
- Location
- CM073429.1:12201317-12206382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-14 1.1e-11 45.7 0.1 3 45 353 395 351 395 0.92 2 2 7.3 1.4e+03 0.5 0.4 6 18 462 475 458 477 0.81
Sequence Information
- Coding Sequence
- ATGGGCACAGCACAGCAGTACTGCCTGCGGTGGAACAACCACCGCTCCAACCTCCTCACCGTCTTCGACGAGCTGCTCCAGAACGAAGCCTTTACCGACGTCACCCTGGTGTGCGAGGGGGGCGGTCCCATCAAATGCCACAGGATGGTGCTAGCTGCCTGTTCCCCGTATTTCCAAAATCTATTCACCGACCTACCTTGCAAACACCCAGTGGTGGTTCTTAAAGACGTCAAATACACGGAGATCAAAGCCATACTCGAATACATGTACAGGGGGGAAGTAAACGTAGCCCAAGACCAACTAGCCGCCTTACTGAAGGTGGCGGAAGCCTTGAAAGTCAAAGGCTTGGTAGAGGAGAACAGGTCGAATAAGAGCCCCAAGGAGGAGGAACCCATGGACCACTCGCCTTCAATCACCACGTCGAACTCGGTGATGCAGAGCTCCGTGCACAGCAGCAGCAACAGCTCCCCCCCGCATTCGACCAACCCCATGTACAAGAACCCTTACAACATGTACAGCAGCAAACCCCAAGAGCACAACTCCAGGATGAATTTACCCATGTGGGCGATGCCAGGATTGCCTCTGCCGCCTCATTCGTCACCGGTGCCTAATCCCAGCCACCCCCACGCCGCCGCCACAGCCGCCGCCATGCTGAACTGCTACGAAGCGGCCAGCTCGGACATATCTCCGTTGAAGAGGAAGAAACTGTCCAGTCTGCTGATGAACAGAGATACACCGATCCTGAGGACGGTACTGGGCCAAGGCCAGGCTGATTCGTCCCAACCTGTTAGTCTGGTGTGCCATCCGGACAGCGCCGAACATTCGGGAACAACCGACGAGCGTGTGAAGCATATGAAAAACGAACCCTCCGAAGACGCTCAATCTCCATATACAGACTTcacgccgatgaacgacgaggAAGACAAATCTAAGTTGGCCATTCCCTCGTCCTCTCCGCAATCCTTCTCCCACGAGATGAGGGGAGTCAGTAGCGGCATAGCCACCTACGTTCCTTCTCAAAAACCTGAATGGAAACGCTACAAGCAGTATACGAGAAACGACATTATGTCCGCCATCGAAGCTGTGAGAAACGGAATGTCCGCCTTGCAAGCGGCTCGAAAATACGGTGTTCCATCTCGGACACTCTACGACAAAGTTAAGAAACTGGGTATAACCACCAGCAGGCCTTTCAAGCGGGGCACCAACGGTAGTTCTGCGTGCTTCCCCTACGGAACTGGGTCCCCCTACGGAGGACATCTATCGGAGACAGACGAAGGGCCGATAAACAACAATTCCGCGTTGATAGACGCCACCACCTTCCTCCAACACGCCATGGAGAACCGTGGAGGAGACGAGAGGGAGGCTTTGGCGGCCATGGCGGCTGCTGCTGCTGCTCACGCGGTCGCTTCTGGACACTCTACCAGTCCGAACAACCACGGAAGGGCGAGGAGTCCAAGCCCTAGTCCTACGATGTTGAAGTACATGAGGCACAGCAGTATGACTCCTTCCCCTGCCCCTCACAGTCACAGCGAGACCAACGGAAGTTCGGAAAGAGATCACGAAGAAGAAGAAGATCAGGTGGAAGATTTGTCCATCGGCCGTAAAGAGTCCAGGGAGTCCAGAGTTATCATGCCACCCATGAACCAGGTGTCAGCTATCATGAAGAAGGAGGATATGCTGATGGAAAGCATAAAGGAAGAAGCGGTAAGGAGAGAGGTGAGCGTAGAGGGAGAGGCGGAATGA
- Protein Sequence
- MGTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCEGGGPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYTEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSNKSPKEEEPMDHSPSITTSNSVMQSSVHSSSNSSPPHSTNPMYKNPYNMYSSKPQEHNSRMNLPMWAMPGLPLPPHSSPVPNPSHPHAAATAAAMLNCYEAASSDISPLKRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSAEHSGTTDERVKHMKNEPSEDAQSPYTDFTPMNDEEDKSKLAIPSSSPQSFSHEMRGVSSGIATYVPSQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGTNGSSACFPYGTGSPYGGHLSETDEGPINNNSALIDATTFLQHAMENRGGDEREALAAMAAAAAAHAVASGHSTSPNNHGRARSPSPSPTMLKYMRHSSMTPSPAPHSHSETNGSSERDHEEEEDQVEDLSIGRKESRESRVIMPPMNQVSAIMKKEDMLMESIKEEAVRREVSVEGEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_01226547;
- 80% Identity
- iTF_01014754;