Mang017740.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963576475.1
- Location
- OY754970.1:28625679-28645455[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.091 5.5e+03 -1.9 0.5 58 83 67 92 35 98 0.57 2 3 1.5e-100 9.1e-96 322.4 23.2 1 300 112 405 112 405 0.95 3 3 0.023 1.4e+03 0.0 3.1 12 234 442 475 406 480 0.55
Sequence Information
- Coding Sequence
- ATGGACCTAAAGACATCAGTGAACGGTTCTATGAAATCCCCGGTTAGTGACAGTGATAATAATGCCAGTGACAACGAACAGTTCACGGATGGGGACTTCTGCGACTCGGAGGAAGAGACCACGATACGTGCCAATACGGAGAACTCCAAGAGTGTACCGTGTAACGAGGCCATCAATGTCAAGGTTGACGTCACTTTCTCCAATGGCGAACTTACCCCCAAGGACAAGAGTAGGAGAGGCAGTTCCGGAACGACTCCTACCCAGGAAAATCTAACCTCCAATGGCAATGAAGATTCCAGTATAGTCGGGATCCTTGGCAAGGACCATGACAGAGCTGAAGCCCGCCTAGCAGCGAGGCGGCAAGCTCGTGCTGAAGCCAGGGAGATTCGGATGCGAGAATTGGAACGCCAACAAAAAGAACAGGAAGAAAATGCAGACAGGGTCTATGATATGTATTCagaaACGGCGCCGAGGGTGGGTAGAGCAGTATTACGGAGTGTTTCTAGTGCGCCTACATCAGGAAACTACCATTCATCACGACGAAGCTCTGAGGACTCTCTCGAAGAGATGGGCAGCATCCGGGACATTAGGCACGAGTTGAAGGAAGTGGAGGAAAAGTTTAGAAAAGCAATGATATTGAATGCCCAACTGGATAATGACAAGGCCTCATTTTcttatcaactagaattattGAAAGACAAATTGGAAGATTTACAAGAACAATATACACAATTAcagCGCGAGCATAAAGACAAATGTCGGTCATACGATTCCCTGTCACGCGAATGCCGAGCAACTCGCGAAGAATTGGATCGATGCACGGCTGCAGTGCTGTTGAGAGATCGCTGTATTCGAGAAGCTGGACTGGAATTGGTGGCTTTGGAGGGTGCAGGGTCGGGAGAGGGGACTGGAGCGGCGCTGGTCAGCTGTGCGGGCAGACAGGCTCTAGAGGAAGCTGGTCAGGGGACACTAGatgtacGATTGCAAACTCTTTGTTCGGAAAGACAAACATTAGAGAATGAAGTTCGTCAACTGAAAGGGCAGTTGGAAGAAGAAAGATCAAAGAAGAAAACAAATCTTCACAACTCTTCCCACAACGGACCAATTAATGGATCAGATAGTGATTCTGATTCAATTGATACTCAacGAGAAAATTCAAAACTAGTCGCAGACTATAAATTCAGAGCCTGCAAAGCAGAACAAGACGTGTTGACCCTTCAAGCTACTGTTGCTCGCCTAGAGAGTCAAGTGTTGAGGTATCGCAGCGCTGCTGAGCAAGCTGAAAGGATCGAGGATGAACTCAAATGTGATCGTCGAAAACTGCAAAGAGAGgCCCGTGAAGCTCTAAGTCGAGTTGAGGAATTGGAAACAGAAAATAGTCACTTAAATAAACGTTTGGATAAACTGAAGAATGCTAAATCTGCACTACTTAAAGAGCTTTGA
- Protein Sequence
- MDLKTSVNGSMKSPVSDSDNNASDNEQFTDGDFCDSEEETTIRANTENSKSVPCNEAINVKVDVTFSNGELTPKDKSRRGSSGTTPTQENLTSNGNEDSSIVGILGKDHDRAEARLAARRQARAEAREIRMRELERQQKEQEENADRVYDMYSETAPRVGRAVLRSVSSAPTSGNYHSSRRSSEDSLEEMGSIRDIRHELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRSYDSLSRECRATREELDRCTAAVLLRDRCIREAGLELVALEGAGSGEGTGAALVSCAGRQALEEAGQGTLDVRLQTLCSERQTLENEVRQLKGQLEEERSKKKTNLHNSSHNGPINGSDSDSDSIDTQRENSKLVADYKFRACKAEQDVLTLQATVARLESQVLRYRSAAEQAERIEDELKCDRRKLQREAREALSRVEELETENSHLNKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086302;
- 90% Identity
- -
- 80% Identity
- -