Mtil018991.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995238.1:4994091-5001111[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0071 0.49 11.3 0.4 2 23 121 143 120 143 0.97 2 18 0.46 32 5.7 0.0 1 23 167 189 167 189 0.95 3 18 0.00058 0.04 14.8 0.2 1 23 193 215 193 215 0.98 4 18 5.1e-05 0.0035 18.1 0.3 1 23 220 243 220 243 0.96 5 18 0.013 0.9 10.5 0.6 2 23 250 272 250 272 0.93 6 18 0.16 11 7.1 5.7 1 23 279 302 279 302 0.95 7 18 0.00011 0.0077 17.0 6.9 1 23 308 330 308 330 0.97 8 18 0.00031 0.021 15.6 4.1 1 23 336 358 336 358 0.98 9 18 0.011 0.76 10.8 1.1 1 23 492 514 492 514 0.98 10 18 0.0058 0.4 11.6 0.3 2 23 540 561 539 561 0.97 11 18 0.0045 0.31 12.0 0.4 1 23 583 605 583 605 0.98 12 18 2.1e-05 0.0015 19.3 0.4 1 23 609 631 609 631 0.99 13 18 1.7e-05 0.0012 19.6 0.4 1 23 636 659 636 659 0.96 14 18 5e-05 0.0034 18.1 0.5 2 23 666 688 666 688 0.97 15 18 7.2e-05 0.005 17.6 1.1 1 23 695 718 695 718 0.98 16 18 0.0034 0.23 12.4 3.9 2 23 725 746 724 746 0.96 17 18 2.2e-07 1.5e-05 25.5 1.8 1 23 752 774 752 774 0.99 18 18 0.0002 0.014 16.2 0.2 1 23 777 799 777 799 0.96
Sequence Information
- Coding Sequence
- ATGGATTTCGGAAAGTTACGTTCGAAACGGCCTCCGACGCCAGACACGCCTCGCAGTGCTTCCCCGCTGCCGGAAAGCAGACCACCGACGCCACAAGAAACAGCAGTACAGATCTACCGGCCTCTCACATTAAAGAAAGTACCGGATATAAGACAAAACGCGTTGATCATTTTCGAATTCTCAACAGCTTATCCATTTGTGTACGGAAACAATAAGTTCAAATGCTTTATTTGCTCACAGCCTTACTTGGATATGACTATATTGAAACAGCACATGCATGAAACTCATACATTCGCGTCATTAAAAAGACTGGTTAATAACCGTAGAGAGAACATCTTGAAAGTAGATGTTAATGATGTGAAGTGTAAATTGTGTTCCGCCAAGCTTAAAGATTTGGTGGAACTAAAGCAACATCTTAAAACTATCCACAAGAAGCCAGTGGATCCGGAACTTAATGATAATTTGATACCCTTTAAATTAAACTCGGCGAATGGACCGTACGAGTGTGTGGTCTGTCAGGCATCTTTTATTAAAGTGAGGATACTGGTCATTCACATGAGTGTTCATTTTAACAATTACAGTTGCGAAGTGTGCGGCTCTGGGTTTATGACTCTGCGTCTCCTGAAGAAGCACTTGGAAGTGCACGAAACAGGGAACTATCCATGTGATCGATGTGACAAAGTTTTCAGTACTCCGTACAAGCGAACACTACATATTCGTGGAGTTCATTTAAAACAGTTTCCGCGGCGATGTCCTTTTTGCCCCGAGAGATTTAACTCTAACTACAAAAGGACTATTCATCTTCAAGACGTCCATAATCAGTCGACCAGAGTCCATATATGTCAAACATGTGGCAGAGGGTTTAATTTAAAGTACCATTTGATTTGTCACACGCGGTCCGTTCACATGCAAGAGAGGAATCATCAGTGTGATGTGTGTCATCAAAGGTTTTGCAACAAGGAGACTTTAAAAAGGCATATGGTGATCCATACGGGAGAAAAAAATCACAAGTGTCATGTGTGTGGCATGGCTTTTTTGAGAAGAAAGAACTTGAAAGATCATTTAAGATTACACGATTTAGGATTCATCGAAGAAACGGACTCAACATTGATATTGAAAGATGATGACGGAAGTGACATAAAACTTAAACTACTAAAGGTACCAATTCCCCTAGATGACCTAAAATACTACTACGAAGATAATGCAAACTGTAAAAAAGCATACAACAAAGTTAATCTCAAGAAAGTTAAGAGAAAGGCCGGTATGGCGTTTTTGGAGGAACCAATAGCGTTGGACAAAATTGATTGGGGACCTAATAATGAGGCAATAACATTTCACGTTAAAACAATACAAGGATCTTGCGTGCGCGAAGTTATCAGGAAAAAGACGAGGGCCGACCAAAAATGGAAAGAAAATGCGTTAACAATCTTTGAAAATTCTTTCGTATACCCATTCATACACGCGAGCAATAAATACAAATGCTTTATTTGTTCAAAACAGTTTCTAGAAGCTTCTTCACTGAAGGAACATTCGCTCACACATAACATAAAAGAAATTAGAGAAGAATTAAATAATAGAGTCAGAGATAAAAATATTAAAGTGGATGTAACTTACACTCAGTGTAAAATATGTTTAGAGTCATTATCTGATCTAACAGCATTAAAGATACATTTAAAATATCATGGAAAGAAACTCGACCCGGACTTTCAAGATAATCTCATCCCTTTCAAATTAAATGGAGATAATTTCAAATGCCAAGTCTGTGGAGAAACCTATTTAAAGTTACGATTATTGATAATTCATATGAGTAAACACTTCAATAACTACAGTTGTGAAGTGTGCGGCTCGATGTTCATATCCCTAACTCTATTGAAACGGCATTTGCAGACGCACGAAACTGGGAACTTTCCATGTGACAAATGCGATAAAGTGTTCAGTAACTCCGCCAAACGAACTCTGCATATGCGGGGTGTACATTTGAAGCAGTTTCCGCGACGCTGTCCCATTTGTCCGGAGAGATTCAACTCAAACTATCAAAGGACGAAGCACTTACGGATAGTACATAATCAAACTACTGGTTTATTTCGTTGTGAGACATGTGGGAGAGAATATGACTTGAAATATCACTTATTAGTTCACATAAGATCAGTCCACTTACAAGAACGGAACCAGGAATGTCCCATATGCCACTCGAGATTCTTCTCAAAATATTGTCTGTCACGACACATGGTGATACACACGGGAGACAAGAATTTCAAATGTGATGTCTGTGGAAAAGCCTACACAAGGAAGAAAAACTTGAGGGAACACTCGAGAACGCACATTGGTCACGCATGCGCGATGTGTGGACAGAACTTCGTTGATCAAGCCAGTTTAATGTCGCATGTTAACTCTCATGGTGTTTTGTAA
- Protein Sequence
- MDFGKLRSKRPPTPDTPRSASPLPESRPPTPQETAVQIYRPLTLKKVPDIRQNALIIFEFSTAYPFVYGNNKFKCFICSQPYLDMTILKQHMHETHTFASLKRLVNNRRENILKVDVNDVKCKLCSAKLKDLVELKQHLKTIHKKPVDPELNDNLIPFKLNSANGPYECVVCQASFIKVRILVIHMSVHFNNYSCEVCGSGFMTLRLLKKHLEVHETGNYPCDRCDKVFSTPYKRTLHIRGVHLKQFPRRCPFCPERFNSNYKRTIHLQDVHNQSTRVHICQTCGRGFNLKYHLICHTRSVHMQERNHQCDVCHQRFCNKETLKRHMVIHTGEKNHKCHVCGMAFLRRKNLKDHLRLHDLGFIEETDSTLILKDDDGSDIKLKLLKVPIPLDDLKYYYEDNANCKKAYNKVNLKKVKRKAGMAFLEEPIALDKIDWGPNNEAITFHVKTIQGSCVREVIRKKTRADQKWKENALTIFENSFVYPFIHASNKYKCFICSKQFLEASSLKEHSLTHNIKEIREELNNRVRDKNIKVDVTYTQCKICLESLSDLTALKIHLKYHGKKLDPDFQDNLIPFKLNGDNFKCQVCGETYLKLRLLIIHMSKHFNNYSCEVCGSMFISLTLLKRHLQTHETGNFPCDKCDKVFSNSAKRTLHMRGVHLKQFPRRCPICPERFNSNYQRTKHLRIVHNQTTGLFRCETCGREYDLKYHLLVHIRSVHLQERNQECPICHSRFFSKYCLSRHMVIHTGDKNFKCDVCGKAYTRKKNLREHSRTHIGHACAMCGQNFVDQASLMSHVNSHGVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429231; iTF_01430118; iTF_00428347; iTF_00787868;
- 90% Identity
- -
- 80% Identity
- -