Mtil018981.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995238.1:4942082-4945658[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.0056 0.38 11.7 0.5 3 23 2 22 1 22 0.97 2 31 0.13 8.7 7.4 0.1 2 20 50 68 49 69 0.89 3 31 0.0029 0.2 12.6 1.8 2 23 93 115 92 115 0.96 4 31 4.3e-05 0.0029 18.3 2.3 1 23 120 143 120 143 0.97 5 31 4e-05 0.0027 18.4 3.1 1 23 147 170 147 170 0.97 6 31 0.2 14 6.8 3.9 2 21 173 192 172 195 0.93 7 31 2 1.4e+02 3.6 0.3 2 19 201 218 201 220 0.93 8 31 0.84 58 4.8 1.9 1 23 267 290 267 290 0.92 9 31 0.013 0.9 10.5 0.4 2 23 319 341 318 341 0.91 10 31 0.03 2 9.4 1.0 1 23 363 386 363 386 0.93 11 31 2e-06 0.00014 22.5 1.0 1 23 391 414 391 414 0.95 12 31 7.6e-05 0.0053 17.5 3.1 1 23 420 443 420 443 0.91 13 31 2.7e-05 0.0018 19.0 0.2 2 23 449 471 448 471 0.94 14 31 0.00015 0.011 16.6 2.7 1 23 475 498 475 498 0.97 15 31 0.0096 0.66 10.9 0.8 2 23 505 526 504 526 0.96 16 31 0.016 1.1 10.2 2.0 1 23 532 554 532 554 0.96 17 31 0.00068 0.047 14.5 3.3 1 23 597 619 597 619 0.96 18 31 1.1 73 4.5 0.0 2 20 647 665 646 666 0.89 19 31 0.0035 0.24 12.3 1.4 1 23 689 712 689 712 0.96 20 31 0.00018 0.012 16.4 0.5 1 23 717 740 717 740 0.96 21 31 0.0096 0.66 10.9 2.2 1 23 745 768 745 768 0.96 22 31 5.8e-05 0.004 17.9 0.2 2 23 771 793 771 793 0.97 23 31 0.085 5.8 8.0 2.2 1 20 799 818 799 820 0.94 24 31 0.47 32 5.6 0.8 1 23 874 897 874 897 0.93 25 31 0.00022 0.016 16.1 0.1 2 23 970 992 969 992 0.94 26 31 2.9e-05 0.002 18.9 0.6 3 23 999 1020 998 1020 0.94 27 31 0.17 12 7.0 7.0 2 23 1025 1046 1024 1047 0.93 28 31 0.02 1.4 9.9 3.5 1 23 1052 1075 1052 1075 0.97 29 31 1.4e-05 0.00095 19.9 5.0 1 23 1079 1102 1079 1102 0.97 30 31 0.00086 0.059 14.2 0.5 3 23 1110 1130 1109 1130 0.97 31 31 2.7e-05 0.0018 19.0 0.7 1 23 1136 1158 1136 1158 0.98
Sequence Information
- Coding Sequence
- ATGTGCTTTTACTGTGGTAGAGACTTGGACACATATGATGATCTTAAAATTCATACTAAAAGTCATGGCTTTTGTTCTGATCGCGATCGCGCCATTCGTCTTGTTAAATCATCCGAGAGCGAAGTCAAAATTGATGTTTCCGCTGTCTCTTGCCATATGTGTAACGAATCCTTTCCAAATTTAGAGAAAATCGTATCTCATTTAGCATGTAGACACAACTTGCCTTACAACAAAGAAGTTGATTTAAACATAGCAACGTACAGGTTGTTTGATTTGAAGTGTTTGTCGTGCGAGGAAACCTTTAAATATTTCAGGCACTTAGTCATTCATATGAATACTATACATCCTAGCAATTGCTTTACTTGTTCTGATTGCGGTCAAAATTTTAATAAGCTAAGGGATTTACGTCACCATGTTAGGGTGCAACATAGAAGTAGTTATACTTGTCCAAAATGTTCGGAAACGTTTGGTTCTAATTCAGAATTGCAACACCACAAAAAAAAGTCTCACGTGTCCACTTGCAACATTTGTTTTAAGACGTTCTCCTCAGATAGCAAACGGCTCAGTCATATGAAATGTGATCACAAGATTGATGGCGCTGAGTGTGGATTCTGTCATAAGGTCATGACGACCAATCAAGGGTTTTTAAGGCACGCAGCTCAATGCACTGCCACACAAAAATGTGACACTGTTATAGTTGACGATGATAAAAAGCAATCAGTTAAAGAAATACGAAATGATATAGCTTGCATTTTAAACCTTTCAACTGCTCTACCTTTTAAATATTTTATGAATAAATTTAGATGTTTCTACTGTTCAAATGATTATGCTAAATGTGACGCTCTAAGGGAGCATACGTCTGCCGAACATCCCCACTGTGATATCGGTATTAAGTCTCTGAAGCTCCGCCATAGATACGAAGGAATTCGAATCAAAGTTGACACAACTTCACTCTCTTGCAAAGTTTGTTTTAAAAGTGTAAACAATTTGGAAACTTTATTCAAACATTTGATCGACGAACACAAAACTAGATTCGATAAATCGGTAGGCGATCATATGCAAGAGTTTAAATTGATTGAGGAAAACTTCGCATGCCCGTATTGTGAAAATGTTTATAGATATTTTGGTTTGCTTCTCAGACATGTGTGTGAGACGCACACTGACAATAAATTCATATGCACATACTGCGGAAAGTCTTTTAGAACCACTCCCAACTTACGATCTCATATATTCAGCTGGCATAATAATATGCCTAGGCATAAGTGCGATTACTGTACTCGTGTGTTTACAACTAAAGGCAGCTTAAAAGTGCATTTGGGACATGTGCACGGCAGCAAGGTGGTACAGTGCACCGAATGCCCAGAGATGTTCACCACACAGTACTGGATGCGGCGCCATATGTTAGACGCGCACGGATCGGGTCACAAGTGTTCTTATTGCGGCAGACAGTTCGTGAAAAATTCTGCAATGGTGAACCATGTCAGACGGTTTCACTTCAAGGAAAAGAACGTCGAGTGTACCGTCTGCTTCGAAAGGTTTTTCGATAAACAACGCCTCAAGATCCATATGGTGAAACATGTCGGCGAAAGGAACTTCCATTGCGACGTATGCGGCAAAACATTTCTTTGGAAAAAGAATCTTAGAGGACACATGTCTTCGCATATCAAAACCAGCAACAATGAATATCCGCCAGGCCCGTATGAGGGCTGTACGTCTGAGCGTCGGCGGAAAAACTTGAAAGTTATCTTCAACCATACGACTGTGATGCCATTCAAATGGCGCGGGAAGTATTTGTGTTTCTATTGCGGCAAGAGCTATACGGAATACACCGAGTTCAAAAAGCACACTAAATCCCATGGCGACTGCAATACCAAAGATTACGCTCTGAGAATGATCAAAGGCAGTCATATAGAGATAAAAATTGACGTCTCTGAAATTGTTTGTAATATATGCAATGAGCCTTATGACAGATTCGATGACATTGTTGATCATCTGATATGTAAGCATAAGTTGGAGTATGACAAGAACGTAGATATACCCTATCAGGAGTATAGATTAGTAGATTTTCGATGTTTGCACTGCGACGAACAGTTCTCTTACTTCGGTTATTTGGTGAATCATGTTAATAATGCGCATCCGCAAAACAGTTTCATATGCGACGAATGCGGTGTCAGTTTTAATAAGAAGCGAGATTTGGCGGTACATTTCAGAAATTATCATCGTCAAGGGGGATATCCATGCGATCAGTGTCTTCTAAATTTCGACACATTCCATACTTTACGTAGGCATCAGAACAATATCCATTACCGGCAGTGTAATAGTTGTGGCTTACGTTTTGCGTCTCTATCCCTCCTACAGAAACATATAAATGTGGACCACCCTGACAATGGTAGTTATAAGTGCAATTACTGCTCCAAGGAACTACACTCATCTCAAGGTTTAAATCAACATAAGAGTAAATGCAAAGTTAAGCTAATTACTCACGTTGAACCTAGTAATTCGGTTACCCCGATAGACACTATCGAAGCGAGAAAGAATTTGAATCTCAAACAAATGAGACAGAATATTCAGTGTATCCTAAATATGTCAACAGCAACTCCATTCAAGTTTTTCTCAAAATACACGTGTTTTTATTGTTCTTCGAAATATGTGGAATTTGAGGAGTTAAGAAATCATACCGCGTTGGAGCACCCAGTCTGCGATCTTAAGTCTAAATATATGAGTAAGTGTAAAGGCGAAAGAGTCTCAGTTAAGATAGACATATCCGTGCTTGCTTGCAAGCTGTGCTGTCTTCCAATGCTAGATTTGAACGTACTTACAGATCATTTGATATCTGAACACAGGGCTAATTACGATAAGTCAATAACTGGCTGTTTGGAACCATTCAGAATCGTTAAAGATAACATTCCATGCCCGTTATGTGCCACAGTGTTTCGATACTTCAGTACACTTCAGCGGCATATGAATGCTGCTCATAGCAATAATAACAGAATATGCGATTTCTGCGGTAAGAGTTTCCGTAATGTCACCAATCTTAAAGTCCATATTTCGTACACACATACAGGCACATGTGAATGCCATATATGTGGTGCGAAGTACCAGAATCAGTGGTGTCTCGCCCGTCACAAGGCAAAGCACCACGATGTCAAAGACTACAAGTGCTCAAAATGTGCAGAGATGTTCCATTCTCAGTACCAGAGACAGAAGCATCTAATCAAAGTGCATGATGAGGGCCACAAGTGTACGTATTGCGGTAGAATGTTCACGCGGAATTCGTTTATGAAGGATCACATACGTAGAACGCATTTGAAAGAGAAAAATGTTGCATGTTCGGTATGCAATGAAAAGTTCTTCGACAACTACCTTCTAAGGCTGCATATGGTTAAGCATGAGGGTGAGAGGAAGTTCACCTGCGAAGTATGTGGCAAAGCGTTCTTGAGAAGGAGTAACCTTAATTCACATAAGGAAATGCACAAGAAATACGGGCATGTATAG
- Protein Sequence
- MCFYCGRDLDTYDDLKIHTKSHGFCSDRDRAIRLVKSSESEVKIDVSAVSCHMCNESFPNLEKIVSHLACRHNLPYNKEVDLNIATYRLFDLKCLSCEETFKYFRHLVIHMNTIHPSNCFTCSDCGQNFNKLRDLRHHVRVQHRSSYTCPKCSETFGSNSELQHHKKKSHVSTCNICFKTFSSDSKRLSHMKCDHKIDGAECGFCHKVMTTNQGFLRHAAQCTATQKCDTVIVDDDKKQSVKEIRNDIACILNLSTALPFKYFMNKFRCFYCSNDYAKCDALREHTSAEHPHCDIGIKSLKLRHRYEGIRIKVDTTSLSCKVCFKSVNNLETLFKHLIDEHKTRFDKSVGDHMQEFKLIEENFACPYCENVYRYFGLLLRHVCETHTDNKFICTYCGKSFRTTPNLRSHIFSWHNNMPRHKCDYCTRVFTTKGSLKVHLGHVHGSKVVQCTECPEMFTTQYWMRRHMLDAHGSGHKCSYCGRQFVKNSAMVNHVRRFHFKEKNVECTVCFERFFDKQRLKIHMVKHVGERNFHCDVCGKTFLWKKNLRGHMSSHIKTSNNEYPPGPYEGCTSERRRKNLKVIFNHTTVMPFKWRGKYLCFYCGKSYTEYTEFKKHTKSHGDCNTKDYALRMIKGSHIEIKIDVSEIVCNICNEPYDRFDDIVDHLICKHKLEYDKNVDIPYQEYRLVDFRCLHCDEQFSYFGYLVNHVNNAHPQNSFICDECGVSFNKKRDLAVHFRNYHRQGGYPCDQCLLNFDTFHTLRRHQNNIHYRQCNSCGLRFASLSLLQKHINVDHPDNGSYKCNYCSKELHSSQGLNQHKSKCKVKLITHVEPSNSVTPIDTIEARKNLNLKQMRQNIQCILNMSTATPFKFFSKYTCFYCSSKYVEFEELRNHTALEHPVCDLKSKYMSKCKGERVSVKIDISVLACKLCCLPMLDLNVLTDHLISEHRANYDKSITGCLEPFRIVKDNIPCPLCATVFRYFSTLQRHMNAAHSNNNRICDFCGKSFRNVTNLKVHISYTHTGTCECHICGAKYQNQWCLARHKAKHHDVKDYKCSKCAEMFHSQYQRQKHLIKVHDEGHKCTYCGRMFTRNSFMKDHIRRTHLKEKNVACSVCNEKFFDNYLLRLHMVKHEGERKFTCEVCGKAFLRRSNLNSHKEMHKKYGHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063785; iTF_00787864; iTF_00341526;
- 90% Identity
- iTF_00063785;
- 80% Identity
- -