Hfuc015382.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015432.1:4183355-4186364[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 2.8 2.3e+02 3.1 0.3 2 19 11 28 11 30 0.93 2 24 0.0017 0.14 13.2 4.4 1 23 80 103 80 103 0.97 3 24 3.8 3.2e+02 2.6 0.1 2 22 132 152 131 154 0.87 4 24 0.0023 0.19 12.8 0.1 3 23 178 199 176 199 0.92 5 24 6.1e-07 5.1e-05 24.0 0.6 1 23 204 227 204 227 0.94 6 24 4.4e-05 0.0036 18.2 1.8 1 23 233 256 233 256 0.95 7 24 5.9e-05 0.0049 17.8 1.1 2 23 262 284 261 284 0.95 8 24 0.00014 0.011 16.7 1.7 1 23 288 311 288 311 0.97 9 24 0.045 3.7 8.7 0.6 2 23 318 339 317 339 0.96 10 24 0.00025 0.021 15.8 2.4 1 23 378 400 378 400 0.96 11 24 1.9 1.6e+02 3.6 0.0 3 20 429 446 427 447 0.86 12 24 0.012 1 10.5 1.8 1 23 470 493 470 493 0.96 13 24 0.00013 0.011 16.7 0.5 1 23 498 521 498 521 0.96 14 24 0.0069 0.57 11.3 2.2 1 23 526 549 526 549 0.96 15 24 0.00018 0.015 16.3 0.2 2 23 552 574 552 574 0.95 16 24 0.063 5.2 8.3 1.5 1 20 580 599 580 601 0.94 17 24 0.51 42 5.4 0.8 1 23 655 678 655 678 0.95 18 24 5.7e-05 0.0047 17.8 0.1 2 23 751 773 750 773 0.94 19 24 2.1e-05 0.0018 19.2 0.6 3 23 780 801 779 801 0.94 20 24 0.021 1.7 9.8 7.5 2 23 806 827 805 828 0.93 21 24 0.014 1.2 10.3 4.8 1 23 833 856 833 856 0.97 22 24 1e-05 0.00084 20.2 5.0 1 23 860 883 860 883 0.97 23 24 0.00035 0.029 15.4 0.3 2 23 890 911 889 911 0.96 24 24 5e-05 0.0041 18.0 0.6 1 23 917 939 917 939 0.97
Sequence Information
- Coding Sequence
- ATGAAACGTGATCACAAGACCGACGGTGCTGAATGTGGCTTCTGCCACAAAATTATGACGACGAAACAAGGTTTTTTAAGGCACGCAGCGCAATGCACTGCTAAAGATGATTTCAAAAATTGTGGCGCTATTATAGTCGATGACGACAGAAAGCAATCGGTTAAAGAAATTCGTAATGATATAGCATGCATTTTAAACCTGTCAACTGCTTTACCCTTTAAATATTTTATGAATAAATTTAGGTGTTTTTACTGTTCCAAAGACTTTACTAAATGCGATGCTCTTAAAGAGCACACATCTACTGAACATCCCCTTTGTGATATAACTTTTAAGTCCATGAGGCTACGTAATAGATATGAAGGAATGCAGATTAAAGTTGATACTTCTGCACTTTCCTGCAAAGTTTGTTTCGAGAATATTAACGATTTGGAAACTTTGTTCGACCATCTTGTTGCCGAACATAAAACTAGATTTGATAAATCCGTAGGTGATCATATGCAAGAGTTTAAATTAGTTGAGGAAAACTTCGGTTGTCCATATTGCGGTGAAGTTTATAGATATTTTGGTTTATTACTAAGACATGTAAGCGGGACGCATACCGATAACAAATTCATATGTACATACTGCGGGAAGTCGTTCAGAACTAATCCGAATTTACGAGCTCATGTGTTTAGCTGGCACAATAGTATGGCCAGGCATAAGTGTGACTTTTGTAGTCTAGTTTTCACGACCAACAACAATCTGAAAGTTCACATGGGACGCGTTCACGGCAGTAAGGTCGTGCAGTGCACCGAGTGTCCGGAGAAGTTCACTACCCATTACTGGATGCGACGACATATGCTTAATGCGCACGGCGCTGGTCACAAGTGCTCCTATTGCGGCAGGGCTTACGTGAAGAATTCCGCTATGGTGAACCATGTCAGGCGGTTTCACCTAAAGGAGAAGAACGTTGAGTGTTCGGTCTGCTTCGAAAGGTTTTTCGACACACAACGGCTCAAGATCCACATGGTGAAACACGTCGATGAATATCCGCCAGGCCCGTATGAAGGTTGTACGTCTGAGCGACGGCGGAAAAACTTGAGAGTTATCTTCAACCATACGAGTGTGATGCCTTTCAAATGGCGGGGGAAGTATCTGTGTTTCTATTGCGGCAAGAGTTACACGGAATACGGCGAGTTCAAAAAGCACACAAAATCTCACGGACATTGCAGTACGAAGGATTACGCCCTAAGAATGATCAAAGGCAGTCACATTGAGATAAAGATCGATGTATCTGAAATTTTTTGTGACATATGCAATGAACCATTCGAAAAATTTGCTGAGATTATAGATCATCTGATATGTAAGCACAAGTTAGAGTATGATAAGAACGTGGACATACCTTATCAAGAGTACAGGTTAGCTGATTTCCGATGTTTGCACTGTGAACAACAATTTTCTTACTTTGGTTATCTGGTGAATCATGTTAATAACGCACATCCCCAGAACAGCTTTATTTGCGACGAGTGTGGAGTAAGTTTCAACAAGAAAAGAGATCTGGCCGTGCATTTTAGAAATTATCACCGACAAGGTGGATATCCTTGTGATCAGTGTTTGTTAAACTTTGAAACGTTTCATACACTACGGAGGCATCAGAATAATATTCACTACCGGCAATGCAACAGTTGTGGCGTTCGCTTCGCGTCTCTCTCGCTTTTACAAAAACATATAACTATTGATCACCCAGACAATGGCAGTTATAAGTGTAATTATTGTTCCAAAGAGTTGCATTCCGCTCAGGGCTTAAACCAGCATAAGAGTAAATGCAAAGTGAAATTAATTACCCAAGTGGAGCCTAGCAATTCTGCCCTCCCAGTAGAAGCAATCGAAGCAAAGAAAAATTTGAACCTGAAACAAATGAGACAGAATATTCAATGTATACTTAATATGTCAACCGCAACCCCGTTTAAGTTTTTCTCAAAATTCACTTGCTTTTATTGCTCTTCGAAGTACGTGGAATTTGAGGAATTGAGAGATCACACTGCTTCAGAACATCCGGTATGCGACCTTAAATCTAAATACATGAGTAAATGCAAGGGAGAGAGAGTTTCAGTTAAAATTGATATATCATTGTTGGCCTGTAAGCTGTGTTGTATCCCAATGTTAGATCTAAACGTGCTCACAGACCATTTGATATCGGAACACAAGGCTAATTATGATAAATCTATAACGGGTTGCCTCGAACCATTCAGAATAGTCAAAGACAATATTCCATGTCCTATTTGCGCGACCGTGTTCAGATATTTCAGCACGCTCCAGCGACATATGAATGCTGCTCACAGTAATAATAACAGAATATGCGATTTTTGCGGGAAGAGTTTTCGTAACGTCACCAATCTCAAGGTTCACATCTCGTATACACATACAGGCACCTGCGAGTGTCATATATGCGGTGCTAAGTACAAGAACCAGTGGTGCCTTGCACGTCACAAGGCAAAACACCATGATGTAAAAGATTACAAATGTACTAAATGCTCGGAACAGTTTCACTCTCAGTACCAGAGGCAAAAGCACCTGATCAAGGTGCACGATGAAGGACACAAGTGTACGTATTGCGGTAGAATGTTCACTAGGAATTCCTTTATGAAGGATCATATACGAAGGACGCATTTGAAGGAAAAGAACGTTCCGTGTTCAGTGTGCAATGAAAAGTTCTTTGATAACTACCTTCTGAGGATGCATATGGTTAAGCATGAGGGTGAGAGAAAATTTACTTGCGAGGTGTGCGGGAAAGCGTTTTTGAGGCGAAGTAATCTTAGTTCGCATAAAGAGATGCACAAGAAATACGGTCATGTCTAA
- Protein Sequence
- MKRDHKTDGAECGFCHKIMTTKQGFLRHAAQCTAKDDFKNCGAIIVDDDRKQSVKEIRNDIACILNLSTALPFKYFMNKFRCFYCSKDFTKCDALKEHTSTEHPLCDITFKSMRLRNRYEGMQIKVDTSALSCKVCFENINDLETLFDHLVAEHKTRFDKSVGDHMQEFKLVEENFGCPYCGEVYRYFGLLLRHVSGTHTDNKFICTYCGKSFRTNPNLRAHVFSWHNSMARHKCDFCSLVFTTNNNLKVHMGRVHGSKVVQCTECPEKFTTHYWMRRHMLNAHGAGHKCSYCGRAYVKNSAMVNHVRRFHLKEKNVECSVCFERFFDTQRLKIHMVKHVDEYPPGPYEGCTSERRRKNLRVIFNHTSVMPFKWRGKYLCFYCGKSYTEYGEFKKHTKSHGHCSTKDYALRMIKGSHIEIKIDVSEIFCDICNEPFEKFAEIIDHLICKHKLEYDKNVDIPYQEYRLADFRCLHCEQQFSYFGYLVNHVNNAHPQNSFICDECGVSFNKKRDLAVHFRNYHRQGGYPCDQCLLNFETFHTLRRHQNNIHYRQCNSCGVRFASLSLLQKHITIDHPDNGSYKCNYCSKELHSAQGLNQHKSKCKVKLITQVEPSNSALPVEAIEAKKNLNLKQMRQNIQCILNMSTATPFKFFSKFTCFYCSSKYVEFEELRDHTASEHPVCDLKSKYMSKCKGERVSVKIDISLLACKLCCIPMLDLNVLTDHLISEHKANYDKSITGCLEPFRIVKDNIPCPICATVFRYFSTLQRHMNAAHSNNNRICDFCGKSFRNVTNLKVHISYTHTGTCECHICGAKYKNQWCLARHKAKHHDVKDYKCTKCSEQFHSQYQRQKHLIKVHDEGHKCTYCGRMFTRNSFMKDHIRRTHLKEKNVPCSVCNEKFFDNYLLRMHMVKHEGERKFTCEVCGKAFLRRSNLSSHKEMHKKYGHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01010594;
- 90% Identity
- -
- 80% Identity
- -