Mtil018331.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995249.1:16965529-16977268[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-11 3.7e-08 33.3 0.0 4 39 177 213 174 217 0.89 2 4 8.1e-12 8e-09 35.5 0.2 1 39 228 266 228 269 0.94 3 4 3.6e-14 3.5e-11 43.0 0.1 2 45 284 328 283 328 0.96 4 4 6.2e-18 6.1e-15 55.0 0.1 2 42 336 377 335 379 0.94
Sequence Information
- Coding Sequence
- ATGCCAGGCGACGCTGGAGGGTCCCGCGTCAAGAGCGAGCCACTGTCAGAAGAAGAAGACAGCAATTCGTTCGTCGACAGTTATCTGTCTAATCAGGTGTCCTCGGCGGAACTAAATGTAAAATTGGAAGCAGAATACGTGAGGACTGATAATATACCCTCGCATCTATTACATCACTTACATGGGACCAGTTTGGAAGAGCTGGCACCGCTGGCGCCGGCGGGTCCCGCCGCGACTCCCGTATGCGTCAAGCAGGAACCCAGAGAGCCCGCACCCGCACTTACGTTGGAGACGCTCGAACCGGCACCGCACAGCACAGAGGGAGCTGCCCTTATAGACAGGCATTTAGCGCTACTGAACGCCAGTGAGATGCCTGATGCCACGGAGTTCATGCCGCTGGTGGCTGTTAAAGATGAACCACTCTCTGAAGGAGAGCAACCTCAATTAAGTGGGGAAGATACAAGCGACTCGTGTGGCACTCAGCCGGAGTCAGCAACGCGTTGCAGCCCTAAGAGTTGGACGCAGAAGGACATGGACAATGCGTTGGAAGCGCTCCGTAAACATAACATGAGTCTTACTAAGGCATCAGCAACATACGGCATACCATCGACAACTTTATGGCAGCGTGCTCACAGACTAGGCATAGACACGCCGAAGAAGGAAGGTGCTTCAAAGTCATGGAGTGAGGAAGATCTACGCGGTGCACTGCAGGCGCTCAGGGCCGGCGCTATATCTGCCAACAAAGCGAGCAAGGCTTACGGTATTCCAAGCAGCACTCTGTACAAGATAGCCCGTCGCGAGGGCATCCGCTTGGCCGCACCATTCAACGCCGCGCCGACCGCCTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGCCTGCATCCGAGCCGGCGCCGCCACCGTGCAGCGCGCCGCCTCTGCATACGGTATACCGACCGGCACACTATATGGTCGGTGCAAGCGGGAGGGTATTGAGTTATCTCGCTCCAACCCCACGCCGTGGTCTGAGAACGCTATGGTTGAGGCGCTGGAAGCAGTCAGAGTAGGGCAGATGTCCATCAATCAGGCAGCGATACATTATAACCTGCCTTACTCCTCTCTTTACGGCAGGTTTAAGAGGTGCAAATATCAAAATCAGGTAACACAACCATCTCAACAACAAGACATACAGAAACCTCAAGAAGTTGATCAAAACCAACAATTTTACTATCAACAGATACCACCAATCGTCCACCATCCTTCAGACGATGCAATTTCTGCATTCAGCCAATATCCACACACATCACATGATTACTCTGAGTTCTATAACTTCAGTAGTGTGGTTACTAGCTGA
- Protein Sequence
- MPGDAGGSRVKSEPLSEEEDSNSFVDSYLSNQVSSAELNVKLEAEYVRTDNIPSHLLHHLHGTSLEELAPLAPAGPAATPVCVKQEPREPAPALTLETLEPAPHSTEGAALIDRHLALLNASEMPDATEFMPLVAVKDEPLSEGEQPQLSGEDTSDSCGTQPESATRCSPKSWTQKDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEEDLRGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALACIRAGAATVQRAASAYGIPTGTLYGRCKREGIELSRSNPTPWSENAMVEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQNQVTQPSQQQDIQKPQEVDQNQQFYYQQIPPIVHHPSDDAISAFSQYPHTSHDYSEFYNFSSVVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063500;
- 90% Identity
- iTF_00858465;
- 80% Identity
- -