Mfac017913.2
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000215.1:20455174-20474529[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-79 2.6e-75 254.5 23.2 1 299 103 397 103 398 0.89 2 2 0.99 1.8e+04 -4.4 7.9 7 36 430 461 405 473 0.49
Sequence Information
- Coding Sequence
- ATGACGGAGGTGGGCGTAACGCAGTACAGCGGAGTGTCTCGAGTGAGCTCCTGTGACGGGAGCGACGGCCATTACTCCGATGCAGATTTCGGCGATTCGGACGAAGATACGTTACGTAACGGCGTTTATCCTTACGAGTCCGTCAATCACCTGCACTGCAGCGATACGGTGAACCGAGTCATCAACGACTGCTTAAGCCACAGTCGAGAACACATCGATGGATTTTCCAAAAGCAATCACGGATCATTGGAAAGCGTCGATAAGGACGTCACCATAGTGGGCATTTTGGGCAAGGATAAATATGAAGCAGAGGCACGTCTTGCAGCACGGCGGCAGGCTCGCGCCGAGGCTAGGGAAATACGCATGCGAGAATTGGAACGACAGCAAAAGGAACAAGAGGAAAATGCCGACAAAGCTTATGATATGCATGCAGAGCCGCTGCTCAGGGCGGGGGCGAGAGGCGGTGTCGGCCGGCTTCTCAGTCCCGCCGCTTTACATTCATCAAGGCGGAGCTCGGAAGACTCGCTGGAGGATGCAAAAGATGTCCGGTTTGAGTTGAAGGAACTGGAGGAGAAATTTAGGAAAACTATGATACTGAATGCTCAACTCGATAACGATAAGTCATCACTGACGTACCAGCTGGATATAATGAAAGATAAATTAGAAGACATACAGGAACAACAGGCGCAATTACAGCGATTGCATCGAGAGAAATGTTCCGCTCTGGAGATTTCGAAGAGAGAAGGAGCGGCGATGCGACTAGAAGCGGAGCGGGGAATGGCTGCCCTCGCGGCCAGAGATACGGCTGCCACCGAATCAGGGCTCCTCCTCATCGCCCTGCCGCCCGACGAGCAGCACCCCGAAGGCAGACTGGCCTACGTCTCCAAGGAATCGGAGAAGATACTAGAAGATGCCGGCGAAGGTACTTTAGATGTCCGGTTGCAAAAACTACACTCTGACAAACAGGCTCTAGAGGAAGAAGTGAAAAATCTAAGATTGCAGCTGAATTCGGAACATTCACGAAAGCGTTTAAAGTGGAAGCGGCGCGAGAGCTCGGGCGCCAACGGCCCGCCGGCTGCCGAAGATGCTGACGGCTCGGACTCGGACGGCTCAGAAGGAGCGGGCCGCGACGCGCGCCGCCTGGCCAGCGACTACTTGTACCGCGCCTGCCGTGCCGAGCAGGAGGCCGCTGCGCTGGGCGCCACCGCCGCTCGCCTCGAAGCGCAGAGCCAGCGGCACAAGGCGGCTGCCGAGCGCGCCGAGCGAGCCGAGGACGAGCTCAAGGCCGAGCGCCGGCGCCTGCAGCGGGAGGCTCGGGAGGCATTGAGCAGAGTGGAAGAGTTGGAAACGGAGAATAGTCATCTGACCAAACGACTGGACAAGCTGAAGAACGCCAAGTCTGCCCTGCTGAAGGAGCTCTGA
- Protein Sequence
- MTEVGVTQYSGVSRVSSCDGSDGHYSDADFGDSDEDTLRNGVYPYESVNHLHCSDTVNRVINDCLSHSREHIDGFSKSNHGSLESVDKDVTIVGILGKDKYEAEARLAARRQARAEAREIRMRELERQQKEQEENADKAYDMHAEPLLRAGARGGVGRLLSPAALHSSRRSSEDSLEDAKDVRFELKELEEKFRKTMILNAQLDNDKSSLTYQLDIMKDKLEDIQEQQAQLQRLHREKCSALEISKREGAAMRLEAERGMAALAARDTAATESGLLLIALPPDEQHPEGRLAYVSKESEKILEDAGEGTLDVRLQKLHSDKQALEEEVKNLRLQLNSEHSRKRLKWKRRESSGANGPPAAEDADGSDSDGSEGAGRDARRLASDYLYRACRAEQEAAALGATAARLEAQSQRHKAAAERAERAEDELKAERRRLQREAREALSRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01007369;
- 90% Identity
- iTF_01007369;
- 80% Identity
- -