Maru001847.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_944547385.1
- Location
- CALYMV010000276.1:109333-127205[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-79 3.9e-74 250.8 22.9 1 299 100 393 100 394 0.89 2 2 0.54 2.2e+04 -4.5 7.6 6 36 425 457 402 468 0.56
Sequence Information
- Coding Sequence
- ATGACGGAGGTGGGCGTGACACCGTACAGCCGAGTCAGCTCCTGCGACGGGAGCGACGGCCACTACTCGGACGCTGATTTCGGCGATTCGGACGAAGATACGTTACGCAACGGCGCGTATCCCTACGAATCCGTTAATCACCTGCGCTGCAGCGATACGGTCAATCGCGTCATCAACGACTGCTTGAGCCACAGCCGAGAACACATCGATGGATTTTCGAAGAGCAATCATGGATCATTGGAAAGCGTCGATAAGGACGTCACCATAGTGGGCATTTTGGGCAAGGATAAATATGAAgcaGAAGCACGTCTTGCAGCACGGCGGCAGGCTCGCGCCGAGGCTAGGGAAATACGCATGCGAGAATTGGAACGACAGCAAAAGGAACAAGAGGAAAATGCCGACAAAGCTTACGATATGCATGCAGAGCCGCTGCTCAGGGCGGGGGCGAGAGGTGGAGTCGGCCGGCTTCTCAGTCCCGCCGCTTTACATTCATCGAGGCGGAGCTCGGAGGACTCGCTGGAGGATACAAAAGACGTCCGGTTTGAGTTGAAAGAGCTGGAGGAGAAATTTAGGAAAACTATGATTCTGAATGCTCAACTCGATAACGATAAGTCATCACTGACGTACCAGCTGGATACAATGAAAGATAAACTAGAAGACATACAGGAACAGCAGGCGCAACTACAGCGATTGCACCGAGAGAAATGTTCCGCTCTGGAGGTTGCGAAGCGAGAGGGAGCGGCGATGCGGCTGGAGGCGGAGCGGGGATTGGCGGCGCTGGCGGCCCGCGACGCGGCGGCCAGCGAGTCGGGGCTGCTGCTCGTCGCCCTGCCGCCCGACGACGAGCATCCCCAAGGCAGACTCGCTTACGTCTCTAAGGAGTCCGAGAAGATACTGGAAGATGCCGGCGAAGGTACTTTAGATGTCCGGTTGCAAAAACTACACTCTGACAAACAGGCTCTGGAGGAAGAAGTGAAAAATCTAAGAGTGCAGCAGAATTCGGAACATTCACGAAAGCGTTTAAAGTGGAAGCGGCGCGACGGCTCGGGCGCCAACGGCCCGCCGGCCGCGGAGGAGTCGGACGGCTCGGACGGCTCGGAGGGCGCGGAGGGGCGCGACGCGCGCCGCCTGGCCGGCGAGTACCTGTACCGCGCCTGCCGCGCCGAGCAGGAGGCGGCGGCGCTGGGCGCCACGGCCGCGCGCCTCGAGGCGCAGAGCCAGCGCCACAAGGCGGCCGCCGAGCGCGCCGAACGCGCCGAGGACCACCTCAAGGCCGAGCGCCGGCGCCTGCAGCGGGAGGCTCGGGAGGCGTTGAGCAGAGTGGAAGAGCTGGAAACGGAGAATAGTCATCTGACCAAAAGACTGGACAAGCTGAAGAACGCCAAGTCTGCCCTACTGAAAGATCTCTGA
- Protein Sequence
- MTEVGVTPYSRVSSCDGSDGHYSDADFGDSDEDTLRNGAYPYESVNHLRCSDTVNRVINDCLSHSREHIDGFSKSNHGSLESVDKDVTIVGILGKDKYEAEARLAARRQARAEAREIRMRELERQQKEQEENADKAYDMHAEPLLRAGARGGVGRLLSPAALHSSRRSSEDSLEDTKDVRFELKELEEKFRKTMILNAQLDNDKSSLTYQLDTMKDKLEDIQEQQAQLQRLHREKCSALEVAKREGAAMRLEAERGLAALAARDAAASESGLLLVALPPDDEHPQGRLAYVSKESEKILEDAGEGTLDVRLQKLHSDKQALEEEVKNLRVQQNSEHSRKRLKWKRRDGSGANGPPAAEESDGSDGSEGAEGRDARRLAGEYLYRACRAEQEAAALGATAARLEAQSQRHKAAAERAERAEDHLKAERRRLQREAREALSRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01008536;
- 90% Identity
- iTF_01008536;
- 80% Identity
- -