Basic Information

Insect: Microplitis deprimator
Gene Symbol: Prdm15
Assembly: GCA_964016945.1
Location: OZ024707.1:22139530-22142812[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 3.7e+02 2.9 0.1 2 23 241 262 240 262 0.94

2 14 0.00039 0.058 14.8 1.9 3 23 271 292 270 292 0.91

3 14 1.7e-05 0.0025 19.1 1.8 1 23 419 441 419 441 0.97

4 14 0.00068 0.1 14.1 1.9 1 23 445 468 445 468 0.96

5 14 1.1e-05 0.0017 19.7 0.7 1 23 478 500 478 500 0.97

6 14 0.22 33 6.1 5.3 2 20 505 523 505 525 0.93

7 14 0.001 0.16 13.5 0.5 2 23 530 551 530 551 0.97

8 14 4.1e-05 0.0061 17.9 2.2 3 23 572 592 571 592 0.98

9 14 0.0018 0.27 12.7 1.1 1 23 597 619 597 619 0.98

10 14 0.00056 0.084 14.3 0.1 2 23 625 646 624 646 0.95

11 14 0.00032 0.049 15.1 6.5 1 23 651 674 651 674 0.97

12 14 0.0035 0.53 11.8 5.4 1 23 680 702 680 702 0.97

13 14 0.00048 0.072 14.5 4.6 1 23 709 732 709 732 0.95

14 14 0.24 36 6.0 6.4 1 23 737 760 737 760 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	3.7e+02	2.9	0.1	2	23	241	262	240	262	0.94
2	14	0.00039	0.058	14.8	1.9	3	23	271	292	270	292	0.91
3	14	1.7e-05	0.0025	19.1	1.8	1	23	419	441	419	441	0.97
4	14	0.00068	0.1	14.1	1.9	1	23	445	468	445	468	0.96
5	14	1.1e-05	0.0017	19.7	0.7	1	23	478	500	478	500	0.97
6	14	0.22	33	6.1	5.3	2	20	505	523	505	525	0.93
7	14	0.001	0.16	13.5	0.5	2	23	530	551	530	551	0.97
8	14	4.1e-05	0.0061	17.9	2.2	3	23	572	592	571	592	0.98
9	14	0.0018	0.27	12.7	1.1	1	23	597	619	597	619	0.98
10	14	0.00056	0.084	14.3	0.1	2	23	625	646	624	646	0.95
11	14	0.00032	0.049	15.1	6.5	1	23	651	674	651	674	0.97
12	14	0.0035	0.53	11.8	5.4	1	23	680	702	680	702	0.97
13	14	0.00048	0.072	14.5	4.6	1	23	709	732	709	732	0.95
14	14	0.24	36	6.0	6.4	1	23	737	760	737	760	0.95

Sequence Information

Coding Sequence: atgtcgtcattaaaacaaaaatccgAAGacgataataaattgattggTTGCGATGTTGGCAACAacataacaattaatttttcaggaTGCAACATCTGCGGGGATTCCCACAGCACTCATgagtgttattttttattaaatttaaactacatcaaAGACACCGAGACAATATCACGAGCACGTCAGACATTACCGAAAGACCTGGAGATCACGCGAATGGCTGATGGAACGACTAGTATAATTGCTAAGTGTGAATACCAACGAGGAACAACCTTTGGACCTTTCGAATCCAAACGTAACTGGGCAATGAACCCGGCGACTAATTTTCCTATCAAGGTTTTCGGAGAGTCTGTCAATGACACTTATTACCTAGAGTATTCCGACGAGGACATCAGTAACTGGATGTGCTTCGTACTGCCTGCCACTAACGCCCGGGATCAGAATTTAATTTGCTATCAAATGAAGCAGGATATTTTTTACACGGCAATGAGAACGATTACAGCTGGAGAAGAGTTGAGAGTCTGGTACGCGCCGTACTATGCGCAGAAGATGAAGATGCCGCTGTATATCACCGATTCTACGAGTCAAGACAAACCCATTCAGACGGTCGTGGCTAAAGATCAGGACTCGCTGGAGGTGCTAGACAAAGCTATGGCGCAGGAATTAGCCAAGAGACTTCCAGCTACGCAGCTGGGTGCTAAAGATGATAAGAAGATTTGGACATGTCGCATTTGCTCGGTGACGATTAATTCAGTGGTCGCTTATGCGAAGCATCAGATGGATCACTACAAGCCTCTAGTTGGGTCTTTTTGTACtgtttgtgataaaaaattttctagtgtCTCTGCCTTAGAGAAACATAGAGCTGACTGTCATGATCCAGCTGTCAGTGAAGATATTGGGATACCGACTTCAGCGAACCAGCAGCAGCAAAACGCCGcgactattttaaatatgagcGAGGATTTCATGACGGGAAAAGAAAATCAGCATGATCTATCACTGCTGGATAATTCAATGAATACTAATGATTTGCTTCATCATGAGGGAAATCTTATGGAAAATTCTTCATTGAAATCAATCCTTGAGAATCAGTGTTTGAATATGAACATAAGTTCAATAGCTGAGTCTATTTTATCTGAAAATATATCAGGTGCTGATtcggttaaatttaatgttgaaGAATTGTCATCTGAATTGCTAGACATATCTCCAGATGTTGATCAGAGAACTACTGAACGTTCGATTGATGATTTTGATTGTGATATTTGCGGTAAAAAATTCCAGCgtgttaattatttgtatcgtCATTTACGCAAACATACTGGGGAATTTATTTGTCCCACTTGTTTGTGCGTTTTTGCTAGAAAAGACAATTTGCTGTCGCATGTTTGCTCAGCTCATACGacacagaataaaaataacgtaCGCTATCAGTGCTCATATTGTCCTAAAAATTTTGCGGTtgaaaaatatctgaaaagACACATTGCGCAGCACGTGGAATTCAATCGTTGCAAGAGATGCCGTCATAAATTTACGACAAAATCTGAACTGGACTCACACAAATGTGCGGCACCCAAGCCAGTTTGCGGACagtgtggaaaaaaatttctcaacgTAGTGTATCTTAATCGTCATATAAAAAGACACAATGAGGTGCCAAAAGTCCCCaagaaaagaataaaaaatgtggAAGAAAAGCCGGCGATTTGTGAAAAATGcggggaaatttttaaaaatctctgCAGTCTTCAGCAGCATCAAAGATCTCATGGCGAAAGAACTTATGAGTGTGATATTTGTAACCGACGTTTTCATCGGATCGGTGTTTTGAAAGAACACAAAGCCACTCATCAGAATGTCGAGCTGCCTTGCAACATttgcgataaaaaattaaaaagtaaaaaagctCTGGACGTTCACATTCTGCTGCATGGAAACAAAAAGTTTCAGTGCGACAAATGCGACAAGAGTTTCtttcaaaaatgtaattatctcAAGCACTACAAAAACGTCCATGCAGAAAAGAGCACTCACACTTGCTCGCACTGTTCAATGCAATTCaccaataaaataacttataatAAACATATCGCGAGTCACAATAAAACAACTGCTGAATTTCTGTGCAATActtgcaataaatatttttacactcAGGCTAAACTTAACAGACATGTTCAGACTTGTCACAGTGGTATTATTTATCGTTGTCCTTTCTGCAAGATGACTGCAAGACATCGTCACAGTATGAGAAGACACTTTGAGAGACAGCATAAAGATTCAAATGATGAATGGAATAAACCGGGATTTGTTAATCAGTTTGCTGAAAAATCACCGGttgaattcattaaaaataattcgaaaaaacctGGTACTTCTAATAAACGGGTTTTACATTCTAAACAATCATCAGTTGGATCAAATGCTGAACCAGTTATTGGACCAATTGCTGGATCAATTACTGGACCAATTGCTGGATCAACTATAGGACCAATTGCTGGATCAATTACTGGACCAATTGCTGGATCAACTATAGGACCAATTGCTGGTTCAATCACTGAACCAATTGTTGGAACAAGTACTGGACCAATTACAGGTCCAGTTAATAGATCAATTACAGGGTCAGTTAATGAATCAATTACAGGTTCAGTTAATGGACCAATAACAGGATCAGTTACTGGAGCAATTACAGGATCAGTAGTTGAATCATTTcctgttaatttaaatactgtaCAAGTAAATCaagttgaagaaaataatcatgcaataaataatcaagttttaatggaaaatataaaagttgatCAACAAATAAACAATACTCAGTTACTTAATGATGTACCACAACTTAGTATTGATACAGATTCACAACTCGCTGAATCTGTTTTAAATAACACTTATATTTTTGGTGAAGATGGCGATATCATGTTCTACGTCTTGGATAATAATCCCATCCCGggttactaa
Protein Sequence: MSSLKQKSEDDNKLIGCDVGNNITINFSGCNICGDSHSTHECYFLLNLNYIKDTETISRARQTLPKDLEITRMADGTTSIIAKCEYQRGTTFGPFESKRNWAMNPATNFPIKVFGESVNDTYYLEYSDEDISNWMCFVLPATNARDQNLICYQMKQDIFYTAMRTITAGEELRVWYAPYYAQKMKMPLYITDSTSQDKPIQTVVAKDQDSLEVLDKAMAQELAKRLPATQLGAKDDKKIWTCRICSVTINSVVAYAKHQMDHYKPLVGSFCTVCDKKFSSVSALEKHRADCHDPAVSEDIGIPTSANQQQQNAATILNMSEDFMTGKENQHDLSLLDNSMNTNDLLHHEGNLMENSSLKSILENQCLNMNISSIAESILSENISGADSVKFNVEELSSELLDISPDVDQRTTERSIDDFDCDICGKKFQRVNYLYRHLRKHTGEFICPTCLCVFARKDNLLSHVCSAHTTQNKNNVRYQCSYCPKNFAVEKYLKRHIAQHVEFNRCKRCRHKFTTKSELDSHKCAAPKPVCGQCGKKFLNVVYLNRHIKRHNEVPKVPKKRIKNVEEKPAICEKCGEIFKNLCSLQQHQRSHGERTYECDICNRRFHRIGVLKEHKATHQNVELPCNICDKKLKSKKALDVHILLHGNKKFQCDKCDKSFFQKCNYLKHYKNVHAEKSTHTCSHCSMQFTNKITYNKHIASHNKTTAEFLCNTCNKYFYTQAKLNRHVQTCHSGIIYRCPFCKMTARHRHSMRRHFERQHKDSNDEWNKPGFVNQFAEKSPVEFIKNNSKKPGTSNKRVLHSKQSSVGSNAEPVIGPIAGSITGPIAGSTIGPIAGSITGPIAGSTIGPIAGSITEPIVGTSTGPITGPVNRSITGSVNESITGSVNGPITGSVTGAITGSVVESFPVNLNTVQVNQVEENNHAINNQVLMENIKVDQQINNTQLLNDVPQLSIDTDSQLAESVLNNTYIFGEDGDIMFYVLDNNPIPGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01005513;
90% Identity: iTF_01005513; iTF_01003762; iTF_01006522;
80% Identity: -