Mdep001135.2
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- -
- Assembly
- GCA_964016945.1
- Location
- OZ024706.1:4924293-4930535[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.055 8.3 8.0 6.2 2 23 264 286 264 287 0.96 2 21 0.039 5.8 8.5 1.8 1 23 362 384 362 384 0.97 3 21 0.064 9.6 7.8 0.4 1 23 433 455 433 455 0.98 4 21 0.0017 0.25 12.8 0.4 1 20 523 542 523 544 0.95 5 21 0.18 26 6.5 2.9 1 23 556 579 556 579 0.96 6 21 0.23 34 6.1 1.9 2 23 585 606 584 606 0.95 7 21 0.004 0.6 11.6 0.0 3 23 631 651 629 651 0.96 8 21 0.00054 0.081 14.4 0.4 1 23 657 680 657 680 0.95 9 21 1.7e-07 2.6e-05 25.4 0.2 2 23 718 740 717 740 0.96 10 21 0.00049 0.073 14.5 0.6 1 23 746 769 746 769 0.94 11 21 0.00035 0.053 15.0 3.1 2 23 776 798 776 798 0.96 12 21 0.00079 0.12 13.8 0.4 3 23 807 827 805 827 0.92 13 21 0.03 4.4 8.9 0.7 2 20 887 905 886 905 0.95 14 21 0.14 21 6.8 0.1 2 23 926 947 917 947 0.97 15 21 0.00022 0.034 15.6 0.6 2 23 964 985 963 985 0.96 16 21 0.00086 0.13 13.7 0.1 1 23 1005 1028 1005 1028 0.91 17 21 0.51 77 5.0 0.3 2 23 1094 1116 1093 1116 0.94 18 21 3.3e-05 0.0049 18.2 0.4 2 23 1151 1173 1150 1173 0.95 19 21 2.9 4.4e+02 2.6 0.2 1 23 1179 1203 1179 1203 0.95 20 21 3.2 4.8e+02 2.5 0.8 1 23 1208 1231 1208 1231 0.83 21 21 0.053 7.9 8.1 0.0 2 23 1261 1283 1261 1283 0.93
Sequence Information
- Coding Sequence
- ATGGATGATGATGTGGTGGAGCTgaataacattgaaaatctCTGTAGACTTTGTCTATCAACAGAAGATCCAAAGTCTCCAATATTTGGGCTCCAGGAGTCTCCAGTTTCGCTggttgaaaaaattcaggctTGTCTATCAATCGAgATATTGTTAACAgataaattatcaaagttAATATGTATAAATTGCCTGAAAAGTGTTAATCAGTGGCATAATTACAAGGAATCATGTCTCAAGTCACAAGAAAAACTCCAGCGATGGCTTGTCAAGCAAATTAATTCTTCGGTTGCTGTTatcGCAACAATAAAGCCCGAGCCCCTGGACATAGAAGTGTACGAAGACAATATCGAGATCGTTGAAATGTCCGAGGATGAATTGAATAACGAGTTATCAAACCGTAGTACAGAATTACCAAACGATAACGCTCTTCCAGAATTAGCAATACGTGGAAGTCGTCGTAGATTAGACATAGATTTACACAACAACACAGGTAaagataacaataaatatataaaatcatataaccAAGGTTTAGTATCagataataatgatgaaataaaattagaacCAACTGACGACGACGAGGACGATATCGATTGTAATGTTGATGTTGAGTCAATAAACGAAAATGACAATGAAGGTGAACTATTGCTAAATCCAATGGCGCTCGGTGCCAGCAAAAACATGGAACCAGACTCTACCCAAAAATTTAACGTAcgtgcagtaaaaaaaaaagtccggCGAGGTCCGCACACTCATTTCCGAGGCCCAAAAGTATTCAAACGTCGGTGTCCTCATTGCCAGCTGACATTGCACTCAAAATCGTCATACGCACGTCACATAAATCGTTATCATCACGACGCCCAACCTCCGTCGGCAGTGACGGCCGCGAATAATTCCAGCGGAGGAAATtctcaacatcaacagcatcAGGTATCACACAACGGACTTCCCTATTCAAAAGACGACGACAATTCAGCAGCCGAAGAGATCGAAGACGTCGAAGACGAGCTGGTGAGTTTGGAAAAAGACGCGCCGTTGACTCAAGTCCAGGAGTCGATTATCAGTCAACTCAAGACGTTTTCTTGCTACGCCTGCCAGCAATCATTCAATGACAGGCGCAGTACGTTAAATCACATACGTCAGCACATGCCCGACTTGAGACCCTACACATGCATCGCATGTCTCACTGAGTTTCCCGACCGTTCGATTTACAAACTACACTGCGGCGCTTCATTTGAATGCGCGATGAAAATAGCACTCGTAGTACCCAAACACGGTACGGAAAAATATTTCACATGTAATATGTGTTTGAGACCGATGCCGAACCGCAAAGAACTGATAAGTCATCTGTCAAAACACTCAGATCGTCAGTACGAGCAATTGACGGCACCATCAGGAACCGCCGGTTCAAAAAAACCCCCAAAATTAAAACCCATTGGGTCGAATTCTGGATCAGCGAATGCTTCaacttcaaattcaaattctacAGCAGCCGCTAAATCAACAGCTGCCGTTTCGACCACAATCGGACCCTACAGAAATGGAGACCCAGCTCACAACCACACCTGCGATTACTGCGGTATGATCTATCGGTACAAACCCAATATGATAAAACACCAGGACTTGTGCAAACGTTTGCCTCCTGAAGAACGAACTTCTTATCGCTGCGTCCACTGCGGAATGACATTTTTGGTGTTCAAAAAATTCCAGTCCCACATTACCACTGAGCACAacaaaaaagaattaatttgttttgtgTGTAATGGAAAATTTCGGTACTCGAATGAATATTTGATCCACCACCAGAAGCATCGGATGATAAATAAAGCCGCGGAAACTCACGCGTTGAATCACTGGAACAAAACGGTGACGATGAAATATGGGTGCGCTGTTTGTCCAGAGCAATTTGACACTAAGGCTGAGCTGAATGACCACCGGTCAGTTCATCTGAagctgaaaatattttcctgCAGCATTTGCCGGCGGATGTTCGGAAACTCACAGTCGCTGCAGGAACACGTAAATGAAGACCACGCACTTGAAGTAGACCCGAATATATCAGCAATTGATTTTCTTGACCAAAGCACTGAGTTGCCAAACACCAGTGGCTGGTCCGTGAACACAGACCCGGGGGTACGCAGCACCGAGTGCACGATTTGCGGGAAAGTATTTGCGAATTACCCGAATTTACGCCGGCACATTCGCTCGGTCCATGCTGCCGACGAACGTTTTAACTGCAACAAATGTTCCAAGACATTTAGCAACGACGCTGAGTTGAGTGAACACACCGACAGCGCGCATGCCGAGCAGGCCAGCAATCGCTGCAATTACTGCAAGAAAAAGTTTGACAGCAAGCATGGGCTGGATGTCCACCAGCGCAACGCTCACGGAATAACCGACAGTAAATTGGCCTGCGATATCTGCGGGAAAGAATTCGGGAACGAGACGTCGCTGAAAATCCATCGCGGCCATCACTTCCGGCGCGACTCGCGACTCAGTATCCGGAATATGCCCCACCCGATGGACCAGGTCCAGGTTGAAATAAACGAAGCAGAAGAACCGGAAGTTGTCATCAGTACCCGACCCGGACGGGCTAGAAAATCTCTATCGAATACTTCGTTGTCTTCGTCACCAAAAAGTTCATCGGAATTAAAGTGTCAAGTTTGCGATGACAAATTCACTGACGTACACGATCTACGTAAGCATCTATGGGATGTCCATTGCGCTAAAAATAAACCTGAGAAATCTTTTACTGATGAGAATAATTTGCAGTGCGAATTGTGTACAAATGTCTTGCCAGATGACAAGAGTCTTGAGGAACACATGAAGTGGCACAAAGACAATCCCATTTTGTCTGACGGCTTGCAGCGGCCTGTTGACATTTCCTGTGACGTCTGCGGTAAATTTTACAGCTCGACGAAAGCTCTTTGGAAGCACAAAAAATTGCACAGCAAAACCGGAGTGACAATTAAATTTCAGTCCGTAAAAAAATCACAGCCTGCGCAGTATCCGTGTCCGGTTTGCCGCAAAGTATTCGGCAATGAAACTTCAATGAAAAAACACAAAGCTGCGGCTCATTATGCGCGTCGCAGTGTCTCCGTTGTGACAACGACGACACCCAAAGTAACCTCACGCAAATCGTCAAATGACGATGAAGTTAAACCTAAAAGACCTAAACTAGATTTTGATATCATTAGGAAAGCTTACAATCTTGAgccaaataattataatgctGAGGTCAGTGGGGGTCCCAGTAACAGTAAAAAACCGGTGTCTTGtggaatttgtaaaaaattactgcCTAGTATGAATTCGCTTTACAAACATCGGCAGAAtgtccataaaaattttagcaagTCATTGGATAATAATGACGACAACAGCGCACGTGGTCACAACGACCATGATAATGATGACGAGGCTGTTATTGATAAGTCCCGGGTGCCTTGCACTGAGtgcgataaaatattttcaaatatgtCGAATATGAAGCAGCATTTGACGAAAGTACACGGGAATGGAAACAAATATTACTGCAGCGCTGACGGTtgcaatcaattatttaactcaCCTTTGGCTAAACAGTTACATGAAAAATCCCACATGAATGTACTGTACAGGTGCACTATATGTTCGCGGCACATGTTTTTACGTAGTGCGATAATCCAGCATCTGGTTACGGAGCATAAAAATGACTACTCACCGGGTACTGAAAAAAGCCTATACAAAAAAACTGACCTCAGTAATTACCAAGTTCACGGAGCGGAAGGACGCGTATGTCCGATTTGTAATATTACTTATCCTAATATCAAAGCCATGAAAATTCATTATGttaaaatacatgaaaatagTTAA
- Protein Sequence
- MDDDVVELNNIENLCRLCLSTEDPKSPIFGLQESPVSLVEKIQACLSIEILLTDKLSKLICINCLKSVNQWHNYKESCLKSQEKLQRWLVKQINSSVAVIATIKPEPLDIEVYEDNIEIVEMSEDELNNELSNRSTELPNDNALPELAIRGSRRRLDIDLHNNTGKDNNKYIKSYNQGLVSDNNDEIKLEPTDDDEDDIDCNVDVESINENDNEGELLLNPMALGASKNMEPDSTQKFNVRAVKKKVRRGPHTHFRGPKVFKRRCPHCQLTLHSKSSYARHINRYHHDAQPPSAVTAANNSSGGNSQHQQHQVSHNGLPYSKDDDNSAAEEIEDVEDELVSLEKDAPLTQVQESIISQLKTFSCYACQQSFNDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFECAMKIALVVPKHGTEKYFTCNMCLRPMPNRKELISHLSKHSDRQYEQLTAPSGTAGSKKPPKLKPIGSNSGSANASTSNSNSTAAAKSTAAVSTTIGPYRNGDPAHNHTCDYCGMIYRYKPNMIKHQDLCKRLPPEERTSYRCVHCGMTFLVFKKFQSHITTEHNKKELICFVCNGKFRYSNEYLIHHQKHRMINKAAETHALNHWNKTVTMKYGCAVCPEQFDTKAELNDHRSVHLKLKIFSCSICRRMFGNSQSLQEHVNEDHALEVDPNISAIDFLDQSTELPNTSGWSVNTDPGVRSTECTICGKVFANYPNLRRHIRSVHAADERFNCNKCSKTFSNDAELSEHTDSAHAEQASNRCNYCKKKFDSKHGLDVHQRNAHGITDSKLACDICGKEFGNETSLKIHRGHHFRRDSRLSIRNMPHPMDQVQVEINEAEEPEVVISTRPGRARKSLSNTSLSSSPKSSSELKCQVCDDKFTDVHDLRKHLWDVHCAKNKPEKSFTDENNLQCELCTNVLPDDKSLEEHMKWHKDNPILSDGLQRPVDISCDVCGKFYSSTKALWKHKKLHSKTGVTIKFQSVKKSQPAQYPCPVCRKVFGNETSMKKHKAAAHYARRSVSVVTTTTPKVTSRKSSNDDEVKPKRPKLDFDIIRKAYNLEPNNYNAEVSGGPSNSKKPVSCGICKKLLPSMNSLYKHRQNVHKNFSKSLDNNDDNSARGHNDHDNDDEAVIDKSRVPCTECDKIFSNMSNMKQHLTKVHGNGNKYYCSADGCNQLFNSPLAKQLHEKSHMNVLYRCTICSRHMFLRSAIIQHLVTEHKNDYSPGTEKSLYKKTDLSNYQVHGAEGRVCPICNITYPNIKAMKIHYVKIHENS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01005473; iTF_01003731; iTF_01006490;
- 90% Identity
- iTF_01006490;
- 80% Identity
- -