Mman015862.2
Basic Information
- Insect
- Microplitis manilae
- Gene Symbol
- -
- Assembly
- GCA_030273425.1
- Location
- CP092724.1:23351231-23356617[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.016 2.5 9.8 4.2 2 23 264 286 264 286 0.97 2 21 0.041 6.3 8.5 1.8 1 23 362 384 362 384 0.97 3 21 0.069 11 7.8 0.4 1 23 433 455 433 455 0.98 4 21 0.0031 0.48 12.1 0.4 1 20 522 541 522 543 0.95 5 21 0.19 29 6.5 2.9 1 23 555 578 555 578 0.96 6 21 0.24 37 6.1 1.9 2 23 584 605 583 605 0.95 7 21 0.0042 0.66 11.6 0.0 3 23 630 650 628 650 0.96 8 21 0.00038 0.059 14.9 0.2 1 23 656 679 656 679 0.95 9 21 1.9e-07 2.9e-05 25.4 0.2 2 23 717 739 716 739 0.96 10 21 0.00052 0.08 14.5 0.6 1 23 745 768 745 768 0.94 11 21 0.00037 0.058 15.0 3.1 2 23 775 797 775 797 0.96 12 21 0.00084 0.13 13.8 0.4 3 23 806 826 804 826 0.92 13 21 0.032 4.9 8.9 0.7 2 20 885 903 884 903 0.95 14 21 2.1 3.3e+02 3.1 0.1 2 23 924 945 923 945 0.92 15 21 0.00024 0.037 15.6 0.6 2 23 962 983 961 983 0.96 16 21 0.00091 0.14 13.7 0.1 1 23 1003 1026 1003 1026 0.91 17 21 0.55 84 5.0 0.3 2 23 1092 1114 1091 1114 0.94 18 21 3.5e-05 0.0054 18.2 0.4 2 23 1149 1171 1148 1171 0.95 19 21 3.1 4.8e+02 2.6 0.2 1 23 1177 1201 1177 1201 0.95 20 21 3.4 5.3e+02 2.5 0.8 1 23 1206 1229 1206 1229 0.83 21 21 0.056 8.7 8.1 0.0 2 23 1259 1281 1259 1281 0.93
Sequence Information
- Coding Sequence
- ATGGATGATGATGTGGTGGAGCTGAATAACATTGAAAATCTCTGTAGACTTTGTCTATCAACAGAGGATCCAAAGTCTCCGATATTCGGGCTCCAGGAGTCTCCAGTTTCGCtggttgaaaaaattcaggcttgTCTATCAATCGAGATATTGTTGACAGACAAATTATCAAAGTTAATATGTATAAATTGCCTGAAAAGTGTTAATCAGTGGCATAATTACAAGGAATCATGTCTCAAGTCACAGGAAAAACTCCAGCGATGGCTTGTCAAGCAAATTAATTCTTCTGTTGCTGTTGTCGCAACAATAAAGCCCGAGCCTCTGGACATAGAAGTGTACGAAGACAATATCGAGATCGTTGAAATGTCCGAGGATGAATTGCATAACGAGTTATCAAACCGTAGTACAGAACTACCAAATGATAACGCTCTTCCAGAATTAGCAATGCGCGGAAGCCGTCGTAGATTAGACATAAATTTACACAACAACACAGGTAaagataacaataaatatataaactcaTATAACCAAGGTTTAGTATCagataataatgatgaaataaaattagaacCAACTGACGACGACGAGGACGATATCGATTGTAATGTTGATGTTGAGTCAATAAACGAAAATGACAATGAAGGTGAACTATTACTAAATCCAATGGCACTCGGTGCCAGCAAAAACATGGAACCAGACTCTACCCAAAAATTTAACGTACgtgcggtaaaaaaaaaagtccgcCGTGGGCCGCACACTCATTTCCGAGGCCCGAAAGTATTCAAACGTCGGTGTCCTCATTGCCAGCTGACACTGCACTCAAAATCCTCATACGCACGTCACATAAATCGTTATCATAACGACGCCCAACTTCCGTCAGCAGTGACGGCCGTCAATAATTCCATTGGAGGAAATTCTCAACATCAACAGCACCAGGTATCACACAACGGACTTCCCTATTCAAAAGACGACGACAATTCAGCAGCCGAAGAAATAGAAGACGTCGAAGACGAGCTGGTGAGTCTGGAAAAAGACGCGCCGCTGACTCAAGTCCAGGAGTCGATTATCAGTCAACTCAAAACCTTTTCTTGCTACGCCTGCCAGCAATCATTCAATGACAGGCGCAGTACATTGAATCACATACGTCAGCACATGCCCGACTTGAGACCCTACACATGCATCGCATGTCTCACTGAGTTTCCCGATCGTTCGATTTACAAATTGCACTGCGGCGCTTCATTTGAATGCGCGATGAAAATAGCACTCGTGGTGCCCAAACACGGTACGGAAAAATATTTCACATGTAATATGTGTTTGAGACCGATGCCGAACCGCAAAGAACTGATAAGTCATTTGTCAAAACACTCAGATCGTCAGTACGAGCAATTGACAGCACCATCAGGTACCGGCGGTTCAAAAAAACCGCCAAAGTTAAAATCTATTGGTTCTAATTCTGGATCCGCGAATGCCTCAACTTCAAATTCGAATTCTGCAGCCGCTAAATCAACAGCCGCCGTTTCGACGACAATCGGACCCTACAGAAATGGAGACCCAGCTCACAACCACACTTGCGATTACTGCGGTATGATCTATCGGTACAAACCCAATATGGTAAAACACCAGGACCTGTGCAAACGTTTGCCTCCCGAGGAACGAACTTCTTACCGGTGCGTCCACTGCGGAATGACATTTTTGGTGTTCAAGAAATTCCAGTCCCACATTACCACTGAGCACAACAAAAAAGAGTTGATTTGTTTTGTGTGTAATGGCAAATTCCGGTACTCGAATGAATATCTGATCCACCACCAGAAGCATCGGATGATAAACAAAGCCGCGGAAACTCACGCGTTGAATCACTGGAACAAAACGGTGACGATGAAATATGGCTGCGCGGTTTGTCCAGAGCAATTTGACACCAAGGCTGAGCTGAATGACCACCGGTCAGTTCACCTGAAGCTCAAGATATTTTCCTGCAGCATTTGCCGTCGGATGTTCGGAAACTCGGCCTCGCTGCAAGAACACGTCAATGAAGACCACGCACTTGAAGTGGACCCGAATATATCAGCAATTGATTTTCTTGACCAAAGCACTGAGTTGCCAAACACCAGTAGCTGGTCCGTGAACACTGACCCGGGGGTGCGCAGCACCGAGTGCACGATTTGCGGGAAAGTATTCGCGAACTACCCGAATTTACGCCGGCACATTCGCTCGGTTCACGCTGCCGAAGAACGTTTCAACTGCAACAAGTGTTCCAAGACTTTTAGCAACGACGCTGAGTTGAGTGAACACACCGACAGCGCACATGCCGAGCAGGTTAGCAACCGCTGCAATTACTGCAAGAAAAAGTTTGACAGCAAGCATGGGCTGGACGTCCATCAGCGCAACGCTCACGGAATAACTGACAGCAAATTGGCCTGCGATATCTGCGGCAAAGAATTCGGGAACGAGACCTCACTGAAAATCCATCGCGGTCATCACTTCCGGCGCGACTCGCGACTCAGTATCCGGAACATGCCCCACCCGATGGACCAGGTCCAGGTTGAAATAAACGAGGCAGAACCGGAAGTTGTCATCAGTACCCGACCCGGACGGGCTAGAAAATCTCTGTCGAATACTTCGTTGTCTTCTTCGCCGAAAAGTTCATCGGAATTAAAGTGTCAAGTTTGCGATGACAAATTCACTGACGTCCACGATCTACGTAAGCATCTATGGGATGTCCATTGCGCTAAAAATAAACCCGAGAAATCTTTTATCGACGACAATAATCTGCAATGCGAATTGTGTACAAATCTCCTGCCGGATGACAAGAGTCTTGAGGAACACATGAAGTGGCACAAAGACAATCCCATTTTGTCTGACGGGTTGCAGCGGCCTGTTGACATTTCCTGTGACGTCTGTGGTAAATTTTACAGCTCGACGAAGGCTCTTTGGAAGCACAAAAAATTGCACAGCAAAACTGGAGTGACTATTAAATTTCAGTCGGTTAAAAAATCACAGCCTGCGCAGTACCCGTGTCCGGTTTGCCGCAAAGTATTCGGGAATGAAACTTCAATGAAAAAACACAAAGCCGCGGCTCATTATGCGCGTCGCAGTGTCTCCGTTGTGACAACGACGACACCCAAAGTGACGTCACGCAAATCCTCGAATGACGATGAAGTTAAACCCAAGAGACCTAAACTAGATTTTGATATCATCAGAAAAGCTTACAATCTTGAGCCAAATAATTATAACGCTGAGGTCAGTGGGGGCCCCAGTAACAGTAAGAAACCGGTGTCTTGTggaatttgtaaaaaattactgCCCAGTATGAATTCACTGTACAAACATCGGCAGAATgtccataaaaattttagcaaGTCATTGGACAATAATGACGACAACAGTGCACGTGCTCACAACGAGCATGATAATGATGACGAGGCTGTTGTTGATAAGTCCCGGGTGCCTTGCACTGAGtgcgataaaatattttctaatatGTCGAATATGAAGCAGCATCTGACGAAAGTACACGGGAATGGGAACAAATATTACTGCAGCGCTGACGGTTgcaatcaattatttaactcACCTTTGGCTAAACAGTTACATGAAAAATCACACATGAATGTGTTGTACAGATGCACTATATGCTCGCGGCACATGTTTTTACGCAGTGCGATAATCCAGCATCTGGTTACGGAGCATAAAAATGACTACTCACCGGGTACTGAAAAAAGCCTATACAAAAAAACTGACCTCAGTAATTACCAAGTTCACGGAGCGGAAGGACGCGTATGTCCGATTTGTAATATTACTTATCCTAATATCAAAGctatgaaaattcattatgttaaaatacatgaaaatagttaa
- Protein Sequence
- MDDDVVELNNIENLCRLCLSTEDPKSPIFGLQESPVSLVEKIQACLSIEILLTDKLSKLICINCLKSVNQWHNYKESCLKSQEKLQRWLVKQINSSVAVVATIKPEPLDIEVYEDNIEIVEMSEDELHNELSNRSTELPNDNALPELAMRGSRRRLDINLHNNTGKDNNKYINSYNQGLVSDNNDEIKLEPTDDDEDDIDCNVDVESINENDNEGELLLNPMALGASKNMEPDSTQKFNVRAVKKKVRRGPHTHFRGPKVFKRRCPHCQLTLHSKSSYARHINRYHNDAQLPSAVTAVNNSIGGNSQHQQHQVSHNGLPYSKDDDNSAAEEIEDVEDELVSLEKDAPLTQVQESIISQLKTFSCYACQQSFNDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFECAMKIALVVPKHGTEKYFTCNMCLRPMPNRKELISHLSKHSDRQYEQLTAPSGTGGSKKPPKLKSIGSNSGSANASTSNSNSAAAKSTAAVSTTIGPYRNGDPAHNHTCDYCGMIYRYKPNMVKHQDLCKRLPPEERTSYRCVHCGMTFLVFKKFQSHITTEHNKKELICFVCNGKFRYSNEYLIHHQKHRMINKAAETHALNHWNKTVTMKYGCAVCPEQFDTKAELNDHRSVHLKLKIFSCSICRRMFGNSASLQEHVNEDHALEVDPNISAIDFLDQSTELPNTSSWSVNTDPGVRSTECTICGKVFANYPNLRRHIRSVHAAEERFNCNKCSKTFSNDAELSEHTDSAHAEQVSNRCNYCKKKFDSKHGLDVHQRNAHGITDSKLACDICGKEFGNETSLKIHRGHHFRRDSRLSIRNMPHPMDQVQVEINEAEPEVVISTRPGRARKSLSNTSLSSSPKSSSELKCQVCDDKFTDVHDLRKHLWDVHCAKNKPEKSFIDDNNLQCELCTNLLPDDKSLEEHMKWHKDNPILSDGLQRPVDISCDVCGKFYSSTKALWKHKKLHSKTGVTIKFQSVKKSQPAQYPCPVCRKVFGNETSMKKHKAAAHYARRSVSVVTTTTPKVTSRKSSNDDEVKPKRPKLDFDIIRKAYNLEPNNYNAEVSGGPSNSKKPVSCGICKKLLPSMNSLYKHRQNVHKNFSKSLDNNDDNSARAHNEHDNDDEAVVDKSRVPCTECDKIFSNMSNMKQHLTKVHGNGNKYYCSADGCNQLFNSPLAKQLHEKSHMNVLYRCTICSRHMFLRSAIIQHLVTEHKNDYSPGTEKSLYKKTDLSNYQVHGAEGRVCPICNITYPNIKAMKIHYVKIHENS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01004526;
- 90% Identity
- iTF_01006490;
- 80% Identity
- -