Mdep016581.1
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- zfh1
- Assembly
- GCA_964016945.1
- Location
- OZ024711.1:3052506-3056936[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 0.019 2.8 9.5 2.0 1 23 40 63 40 63 0.96 2 32 0.015 2.3 9.8 0.4 2 23 70 92 70 92 0.93 3 32 0.00011 0.017 16.5 2.9 1 23 98 120 98 120 0.97 4 32 0.00042 0.062 14.7 0.2 1 23 124 146 124 146 0.98 5 32 4.3e-05 0.0064 17.8 3.0 3 23 154 174 153 174 0.97 6 32 0.00092 0.14 13.6 0.1 1 23 180 202 180 202 0.98 7 32 0.36 53 5.5 1.5 1 23 208 230 208 230 0.97 8 32 2.1e-07 3.1e-05 25.1 0.2 2 23 237 258 236 258 0.97 9 32 2.9e-06 0.00043 21.5 1.1 3 23 266 286 265 286 0.98 10 32 4.3e-06 0.00064 21.0 5.0 1 23 292 314 292 314 0.98 11 32 0.0028 0.42 12.1 1.4 1 23 386 408 386 408 0.91 12 32 1.7e-07 2.5e-05 25.4 1.1 1 23 414 436 414 436 0.99 13 32 9e-07 0.00013 23.1 0.1 1 23 442 464 442 464 0.98 14 32 0.0012 0.18 13.3 2.5 2 23 471 493 470 493 0.95 15 32 1.4e-05 0.002 19.4 6.5 1 23 498 520 498 520 0.97 16 32 2.7e-05 0.004 18.5 1.5 1 23 529 551 529 551 0.98 17 32 7.1e-06 0.0011 20.3 0.9 1 23 557 579 557 579 0.97 18 32 7.9e-05 0.012 17.0 1.3 2 23 586 607 585 607 0.97 19 32 5.3e-06 0.0008 20.7 3.3 1 23 613 635 613 635 0.98 20 32 3.3e-05 0.0049 18.2 0.5 1 23 641 663 641 663 0.96 21 32 0.15 23 6.7 0.8 1 22 755 776 755 778 0.89 22 32 2.9e-07 4.3e-05 24.7 1.6 2 23 785 806 784 806 0.97 23 32 3e-06 0.00046 21.4 3.0 3 23 846 866 844 866 0.95 24 32 0.00019 0.029 15.8 4.6 2 23 872 893 871 893 0.97 25 32 0.00059 0.088 14.3 0.1 1 23 898 920 898 920 0.98 26 32 4.7e-06 0.00071 20.8 2.7 1 23 928 950 928 950 0.98 27 32 0.034 5 8.7 2.5 1 23 956 979 956 979 0.94 28 32 0.0002 0.03 15.7 0.6 2 23 991 1012 990 1012 0.96 29 32 1.9e-06 0.00029 22.1 1.8 1 23 1018 1040 1018 1040 0.96 30 32 5.1e-08 7.6e-06 27.0 0.2 1 23 1046 1068 1046 1068 0.98 31 32 3.9e-07 5.9e-05 24.2 0.9 1 23 1074 1096 1074 1096 0.98 32 32 0.0006 0.09 14.2 1.1 1 22 1102 1123 1102 1123 0.97
Sequence Information
- Coding Sequence
- ATGATACCGCTGTCTCTGCCTCCAATGCCGCAAAAAAAGTCAGCGAATTCCAATGCAGCTAAAAAATCAGACTCAAAAAAAACCGACGACAAATTCGCGCCCAAGACCGGCAAAAGGTACAAGTGCAAAATTTGCGGCAAGGAGTCGTGGAATTTCCATCAATGGGAGAGACATTATCGACTGGATCACGGGAAACCCAAGGCGGAAAAATGCTCCCAGTGCGACCGAATTTTCTTCGACGACGAAAAGCTCGCGAGACATGTCGTTAAAATGCACCAGGAGGAGCGGCCTTTTCCCTGCCACATCTGCAACAAACCTTTCAAGACCGACAAGTTCCTGAGGATCCACTTGAAGCAACACAACAAACGGTACTCCTGTGAAATTTGCGGGATGTCTAAAGTGTCGCCGTACGACTTGCGCCTGCACATGATGAAGCACAACAAAGAATATTACGCTCACTGCGAGTACTGTCAGCGGGGATTCTACACCAAGCAATCTCTGCAGCGACACATCCTCACGCACACCGGGGAGAGACCTTTTGTATGCAGGATTTGCAACGCCTCGTACGCCAGCGCGTCTTACTTGAGTTTGCACGCGAAAAGTCACTCGGAGAGAGAAAAATTCAAGTGCAGTCTCTGCGACTACGAGACTTATTGGAAGACTTCTCTGAAGGGTCACGTCAAAAAACACACGGGAGAGAATCGCATTAAATGTGAAGTCTGCGGGAAATCTGTTTCCAGTCAGTCGTACTTGCAAGTACACATGAGGATACATACTGGAGAAAAACCAAATATTTGCGAGGTGTGCGGCAAGTGTTTCAGTGTCAGGAAGTATCTCATAGTCCACCTCAGAACTCACACGGGGGAGAGACCATACGAGTGTAAAATATGTCACAAAAGATTTACCCAGCACGGGTCACTCAATTCGCACATGAAGGGCCACAAGGGAGACGTCGCGAAAGTCGAAGAAGTCGAGGAGATTGAACAGTTGGAAGAAGAATTGTTGTCTTCCTCGCAAATAAAGACGGAACATACGGAGATTTTAAAACGTACCGATCAAAAATCAATTCCAGCTGAAGAATCGTCTGATACAAAAGACAAAGAGACGGAAGTCTCAGttaaagataaagataaaaatataaataataaagagtCTTATGTCTGCAAAATATGTAACAAGCACTTCCGGTTAAAGAATCTGTTTGAAGGCCACTTGGTGGCTCACAGCGACGCGCGTCCTTACCAGTGTGACATCTGCAACAAGTCATTCAAACGCACCAGCACCTTGGCCGTGCACCGGAGAATCCACACCCGCGAGCGCAATTTCATCTGCGACGTGTGCGGACGTGCGTTCATCCAGGCCTCGCAGTTAGCGATGCACCAGCGCCGGCACTTTGAGAAGTACATCTGCTTCTGCGAGCTCTGTGGCAAGGGATTTTTCACCAACGCCGAATTGCACGGGCACATGAACATCAAACACGGCGCGAAAGAACACGTGTGTCATCACTGCGGCAAGTCCTTCCCAAACAATCACACTCTCGCAAGACATGCAAACATGCATGACCCGAATTTCAAACCCATTAAACATCAGTGTGAATTCTGCGGGAAAATATTTGCCTACAAAAATTCCCTAATGGTCCACGTCAAGTCGCACACGGGGGAAAATAAATACGACTGTCATCTCTGTGGGAAATCAGTATCTTCTAGAGGCTCGCTCCAGGACCACTTGCGCCTCCATGGAGGTGAGAAATCTCTGGTCTGCGATGTTTGTGGTAAAGCTTTTCACAAAAGGACCACACTGGTGGTACACAAGCGCACGCATACAGGAGAGAAACCCTACAGCTGTGACACTTGCGGGAAATCATTCACTCAGCACTCGACCCTGGTGATACACAAACGTTATCATACAGGTCAGCGTCCGTATCAGTGCACAGTGTGTACCAAGTCGTTTGTGTCAAGAGCGCTGCTCAATGTACACAACAAAGCCCACGTGGTGGTCCTTCAGCCCACATTCACCCAGACTCGATGCAGCAAAATCTCACCGTATTACTCAATAGCTACAAATGATGAAGATCTAAGTCTGACAAATGGTGATCCGGTTGTTGTTCAGATGGATGATGACAAGATACCTGACATTAATCCAGTTTATCCGTCCATTGAGATGTCTCGTAAGTCGGACACTGATGTGTCCCATAAATCAGGCATCGATGTGTTGAAAGTTATAGATGAGGATCACGATAACCAAGAGGACATGCCGCTGGCTTATTACTGCAAGCTCTGTGCCAGATTTTTTGCCTCGTCGTTGCTGTTCGAGCAACACAAAGCTGATATGCACGAGAGCAACCGCAAAAGTACTTGCGACCAGTGCGGTCGGGTTTTTCGTACGCTGGTTAACCTCCGCAAGCATATGAAGAAGCACAACGgtcaaaaaagtataaaagatTACGCTGAGTCGTCAGCGGAGCACTCGGACGTCGATGCAAGTGATAGAGACATCGAGGTCAAGAAAGAAAACAGATCGAGGCGAGAGTTGGCGTGTAAAATATGTAACAAAGTCTTCCGACACAAGAGTAATTATCAGAAACACCTGGTGAGACACACGACCGGTGACCTGACTTGCAAGCACTGTCCCAAGAAGTTCCGTCTCTATCGCGACTTGACGAGACACGAAAAAACCCATTTCTTGCCGAGCTACATGTGCAAGGAATGCGACTACGAGACCACGGTGTTGGCCGCCCTGACAATTCACATGCTGAAGCATACAGACAACGCGGGTCTGCCCTACAAGTGCAACGAGTGCGACAAACACTTCAGGAAAGCGACTGATTTACAGGAACACTACAATATTCATTCCGGCGACAAGCCTTTTGTGTGCGAGCAGTGCGGGAATTCGTTTTACTTAAGGAGGCAACTGTCGGCTCACTGCCGACGCCTTCACCCTGAAATTAAGGCCAATAAAGTAACCAGCACGACGTGTGATATTTGCGGACGAGTTCTCGCAACAAAGCGCTCGCTCTTCCGGCACAAAGAGAGCCACAATCCGACGAAACTGTATCTGTGCGATTATTGCGGGAAAAGTTTGAGCAGCGCTGAGCATCTGAAGAAACACAGGCGCATCCACACTGGGGAAAAGCCCTACGTGTGTGATATATGCGGCAAGGGATTCACGGACTCGGAAAATTTACGGATGCACCGGCGCGTCCATACGGGCGAGAAACCCTACAAGTGCGATCAGTGTCCGAAGGCTTTTTCCCAGAGATCAACGCTGACTATTCATCGTCGCGGACACACTGGGGAGAGACCGTACGTGTGTCAAATCTGCAAGAGGGGATTTTCGTGTCAGGGTAATCTCACCGCACATCAAAAAACCACATGTGTCTAG
- Protein Sequence
- MIPLSLPPMPQKKSANSNAAKKSDSKKTDDKFAPKTGKRYKCKICGKESWNFHQWERHYRLDHGKPKAEKCSQCDRIFFDDEKLARHVVKMHQEERPFPCHICNKPFKTDKFLRIHLKQHNKRYSCEICGMSKVSPYDLRLHMMKHNKEYYAHCEYCQRGFYTKQSLQRHILTHTGERPFVCRICNASYASASYLSLHAKSHSEREKFKCSLCDYETYWKTSLKGHVKKHTGENRIKCEVCGKSVSSQSYLQVHMRIHTGEKPNICEVCGKCFSVRKYLIVHLRTHTGERPYECKICHKRFTQHGSLNSHMKGHKGDVAKVEEVEEIEQLEEELLSSSQIKTEHTEILKRTDQKSIPAEESSDTKDKETEVSVKDKDKNINNKESYVCKICNKHFRLKNLFEGHLVAHSDARPYQCDICNKSFKRTSTLAVHRRIHTRERNFICDVCGRAFIQASQLAMHQRRHFEKYICFCELCGKGFFTNAELHGHMNIKHGAKEHVCHHCGKSFPNNHTLARHANMHDPNFKPIKHQCEFCGKIFAYKNSLMVHVKSHTGENKYDCHLCGKSVSSRGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYSCDTCGKSFTQHSTLVIHKRYHTGQRPYQCTVCTKSFVSRALLNVHNKAHVVVLQPTFTQTRCSKISPYYSIATNDEDLSLTNGDPVVVQMDDDKIPDINPVYPSIEMSRKSDTDVSHKSGIDVLKVIDEDHDNQEDMPLAYYCKLCARFFASSLLFEQHKADMHESNRKSTCDQCGRVFRTLVNLRKHMKKHNGQKSIKDYAESSAEHSDVDASDRDIEVKKENRSRRELACKICNKVFRHKSNYQKHLVRHTTGDLTCKHCPKKFRLYRDLTRHEKTHFLPSYMCKECDYETTVLAALTIHMLKHTDNAGLPYKCNECDKHFRKATDLQEHYNIHSGDKPFVCEQCGNSFYLRRQLSAHCRRLHPEIKANKVTSTTCDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICKRGFSCQGNLTAHQKTTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01005454;
- 90% Identity
- iTF_01006474; iTF_01005454;
- 80% Identity
- -