Mdep006718.1
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- -
- Assembly
- GCA_964016945.1
- Location
- OZ024707.1:13166618-13168106[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-12 1.2e-08 35.5 0.0 1 43 17 57 17 59 0.90 2 2 9.3 2.2e+04 -3.8 0.1 16 21 131 136 131 136 0.90
Sequence Information
- Coding Sequence
- ATGAATTTTAGgtttcaaaaaaaaaataaacctacGCGACTAAATTATTCTCCTGATGATTTAGCTAACGCTTTGAAAGCTGTTGACACAGGTGTTTCACTGAGAAAAGCTGCTGCAGCGTACGGAGTGCCCATAGCTACACTCTCTAGAAAAAAAGGGAACCCTGAGACATCCAAACAAAAAACTGGACCAGCAACTGTTTTTTCTGATACCGAAGAACAAAAAATAGTTGACTGGATTCTTTTTAGAGCTCAGCGTGGTTTACCAGTAACTAAAACAGAGCTCTTAGATTCTATTCAACAATATGTGAAGATGTCGAAAAAAGAAACTCCGTTTATTGATAGTCGACCGAGCCGACATTGGTATGAGGGCTTTCGAAAACGACACTCTCAAATGTCAATCAGGAAACCACAACATCTGACTTATAGTAGAGCAGCAGTGACCGGTGATGACCTAAAAGATTGGTTTGAAGAACAAGCTAAGtatttaagtgaaaaaaaattaatggagaTTCCTTCTACGAGAATTTTCAACTGTGACGAGACTTATGTAAGTTTATGCCCTCCATCAGAAAAAGTATTGTTAGCTAAAGGATCCCGTTCTGCGTATAAGGTGGTTGATTCTGATAAAGAAGGATTTACTGTATTGTTTATGTATAGTGCTAACGGTGATCGTGCTCCCCCCATGCTCATGTTTCCTTATAAAGAAGAAGTGTTAGAgaaaattgtcaaaaattgTCCTGAAGGTTGGGGTATTGGGCTCTCAGATAATGGGTGGATGACTTCTGAGTCATTCTATGAgtatataacaaatatattttatccatGGCTAGTGAAACAAGGAACTCAGTTTCCAATTGTGTTATATTTGGATAATCATTCATCACATATGACTATGCCTCTGGTTAAATTTTGTCGGGAAAAGGGTATTGAGTTAATTGGACTTGTTCCCAACTCAACCCACATAATGCAATCACTTgacattagttttttttacccaTTTAAAGAGACATGA
- Protein Sequence
- MNFRFQKKNKPTRLNYSPDDLANALKAVDTGVSLRKAAAAYGVPIATLSRKKGNPETSKQKTGPATVFSDTEEQKIVDWILFRAQRGLPVTKTELLDSIQQYVKMSKKETPFIDSRPSRHWYEGFRKRHSQMSIRKPQHLTYSRAAVTGDDLKDWFEEQAKYLSEKKLMEIPSTRIFNCDETYVSLCPPSEKVLLAKGSRSAYKVVDSDKEGFTVLFMYSANGDRAPPMLMFPYKEEVLEKIVKNCPEGWGIGLSDNGWMTSESFYEYITNIFYPWLVKQGTQFPIVLYLDNHSSHMTMPLVKFCREKGIELIGLVPNSTHIMQSLDISFFYPFKET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495717; iTF_00822924; iTF_00822921; iTF_01494988; iTF_00822925;
- 90% Identity
- iTF_01495717; iTF_00822924; iTF_00822921; iTF_00822925;
- 80% Identity
- -