Basic Information

Gene Symbol
jarid2b
Assembly
GCA_964016945.1
Location
OZ024710.1:4060000-4066667[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4 1.1e+04 -2.1 0.1 39 83 143 188 134 189 0.70
2 2 4.8e-23 2.1e-19 70.6 0.1 6 89 1380 1461 1376 1461 0.94

Sequence Information

Coding Sequence
ATGGTGTTGGGTAGAAATGATAAGAGAAAAAGGAAAGTCGGTGACCTGGTTGATCTTATGGATCCGCTTTCGGAATCTCCTAAAagAGCTAAAGTTCATGCTCAGAGAAAATTCGCTCAAGGATCAGCGACAGTGTTTACATCTCCTCAAACTTTAGttaaagagaaagaaaaaccTAAACCTGCTAAGGTTACTGAATTGATAACACATAAACGTCCTAATACTGAAGATTTTTTAACGTTTCTTTGTTTTagagGAACGTCGATATTACCACCgagtttggatttttttaatgttgggTTAAAGAAAGATAAAGCAGAATCAAAAACTACatcaaaaaagttaaatagtACAAGTAATTCATCAACATTTACTCCGACACCGAGTACATCTGGAGTAGGATCAAAAGCAGTAACAAATCAAACTACAGTAACTAAAGCAGGAGCGACAGGTAAAGTTGGTGATCCAGTGCGGAAAAAAGTTACGACAGAGATTCAAAAGccagtaaataaattcaaatcagCGACGTCGACGATTCAAGCGCTGAAGAAAAAGTACCAAGAGCAACGTCTAGCCAAACAGAGGATCGAAAATAAACTAAAGAAGACTTGTGTTATAAGAACACGGTCCACTGTAGGCAAACCTTTGTTGAAGAGCGTTAATAAATTAGCACCACGTAAATTTTTGCCAAGAGTTGAACCTAAAAAACACTGCCTACGAAGTAACACGACGTTGGAGAAACCGTTCAAAGCTTTTGGGAAAGTTAAAGTAATTTCAGCGTCAAAGGGAACGGCGAAGAAACGAGCGGTGCTGAAAGAACAGAGCAGTGAGTCTTCGAGCTCAGAATCTTCTTCAGAGGACAATAAATCagatattaaattaactcAACAGATAAAACGTACGATTAAGAGCATAAAGAAAAATGCAACGACGAATAAACCGGAGTCGAGAAGAGTCACTCGGTCGTGTACTGAAGTGACGTCACCGGCGGCTCCAGTTACTCAGTTGTCCTCGCAAAGGCCTTCTAGAAAAACTAAAGAAGCTGCTGCTGTTTATATGGAAATATTGAGTAGAAAATTAGTTAGTCCAGATTtagataatgatgataatttgtCTGTTGATAGTTATCCAGAGTTACCCAACACTAGACGTCTTGTTGAGACGGAAGCTAAAGTTAAAGTTAAGAAACTGATTAAAGAGAAGAATAAAGATAAAGACAAAGATAAAAAAGAAGTATTGAGTGGTAAATCAAACGTTGCTGGTGATAAAGGTAAAGAGAAGACTGCTGCAGTagtgaagaataaaaaaatagctaAGACTCAAGAGTCTTCGGAGAGCGAAGAAGAGTCTGTTAGTTCGGAAGAAAGTACGCGAGCCAGACGTATGACTAGGCGTAGCAGTATTCCTTCAGCTAAGCCGGTAGTTGCTCGTAGTCTCAGATCGTCATCACGCAATTCACCTCAGAAGATTGCCAATTCACCGCCTGCTGTTGTCGGTAAAGTCAAAGGCAAGACTTGGATTAGACGCAAACGAGAGACGGCTACTTCTCCGGTTGAAAAAGTCAAAGAgaaggaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaggaaaaagaaaaagaaaaagaaaaggaaaaggaGAAGGAAAAGGAAAAGGAaaaggaaaagaaaattaatgagaAGAAGAACAAAGAGGATAAAGTACCGGAGGAAGAATTTAGTGGCGTAAGTAAAGTTAGGAAGAAAAAAGATgatgaaaaagttgaaaagtTAGAAAAAGAAGTAAAGAAAGATATTGAGAAGGAAAAGGTCGAGAAAGACATCAAAGGATCTGATGACGAAGAATCTTTTCGTGGGTTTATTACGAAGCCAATAACGAAGGTGATTAATTCTTGCAATAGTCAAGTGAGTGTTAATTTGACCCCTTCTGAAgaggttaataaaaaattgaatgctTTGAAAACTACTCCGAATACTTTGGAGTTGAGGGATAAAGTTGGCAAAGCTGAAGTTCCTGCGTCGGTTAACGGCGGGGAGGTGAAATCTGAGCAGAAAGAATCTTTGTCGAGTCATGTACCTGTTGTGGGATCGCTGTCATCTCAAGCCAGCATTTCGGagtctgataaaaaatttaattgtgtaacaaATGTAAATACTCAAActactgctactgctgctgctgctgcggCTATTATTGATATTCCGTTGACAACTTCTTCGTTGGGAAGAAAAGAACGTGTTAATATGTCGACAGAGCAAATTGAAAAGTGGCTGAATGAAAGTTCAATGGCCAAAGAAGAAAGTAAAGCTGAGATGGAGACTGTTACGAACTTTACATTCGAAGTTGCgggtaaaagtaaaaatgataTGAATCATTTGTCAATACCAACGCGTATCCAGCATCTTGTGAGACCGGTAAATGTCGCGATTGCTAAAATGGCTGAGAAGACGCTTACTAAAGAACGTTTGAGTAATGCGGTTAAGGCTGCGACCTTAGTCAACGCTGGAACTGTCGTAGGAGCTGCTGCAGCCATTGCGAAATTGTCGAATTCAGCAAATCCAGTGCTCACGACaaacagaaataaaataaatgctgATATCAAGGAGATTATTAAGGGAAGAATTGCTAAGACTGGTGTCTGTACTCCGAGTAAAGAGACCGTTTGTGAAGACAGTGATGTAAGTTCACGAGCTGACGGAGCCAGTACTTCAGTCGAGGGATCTCCGGAGAAAAAATCACCCGATAAAAAACTTATCGTTCAACGTAAAACATTTTTACCAAAAGTTAAAGAACGTAAGATTGCTATTCCTAGTATCAATGCCTTCTCTCCGGAAAATGAAAGCAGCGTTTATGCTTTTGAGAGCGATACTGAAGCTCCAGTTAATACGCCATTTAGGAGAAAACAACGTGACAGTAAATCTGGTGCTTCTGGTTCGTCGGACATGGATGTATCGAGAACAGAGAGTGAGGATGGCAATACACGAACTCCTGGAAAGTTAACGGACAAGGATGATAAATGCATGAGTAAATCAAAAAGCGTTGGTACAAGTATTGAAGATGTTGGTACTGAAGTTAAGTCAATTGCAAGCTCCGGTGATAAAACTAAACAGCCGAGTAGTTTTCAAATACCTGATACATTTCGTAACATGTCTAATGTGCAAGTTGTGCCGCTAGGAAAGATTCCCAGTGTGTGGAATAATGTAAATTGCAGTGCTTCAATAGCCGTGCAGGTAAACTTCGATGACCAGTCCCAGAATTTGCAGAATCAGGTGGCGGCTGAAGAGAGTCAGCAGCGTAGCACGGAAATATCAACACAGACGGAAAATACAAACGAGAACGAGGACGAGACTGATGCTCACGTATTTTACATTCCTTTGCAAACTGTATCTAGGAGTGGCCCTAATTTAGTACAGGGACAGCCGCTGATACAGGGAGTAGCTGTTAAATTAGGCACTGAGGGACCAACGGGTCCTAATCAGCGTGTGCTGTTACGAGCTCAATTGGTAACAAAACCGCCAATGGCTGTTGCAAGATGTCCACCCGTTGGCACTGTGCAACCTACTACTCGGACACCTCCAACTGGTACCAGTGATACGGTACCGTCTACTTCTACGTCATCTACATCCACATCTACATCTAATTTAGGTCCAGTAAAACCTAGGATTCCGGGTTCGCAAACGGAGAGTGTTGCGAAGCAGACTGGTGTAGCTGAAAAAATTACCAAGTCTCCAAAAGTATCTCGCGAGCGCAAAAGCTCAGCGGATGCTCCTAAAGTTGCTAGAAAACTTTCAGCTAAGGCGAAAAAAAATGCTGAGATGATCAAAAATATTGAGAACGCGTTTCCTAGTATGGAAGTTAAAGGTGAAGCGCGCTTGGTTGATGCGCCGACGTTCTATCCTTCAGAGAAAGATTTTCAAGATCCGCTTGAGTACATCGACAAAATAAGACCTATCGCTGAAAAATATGGAATCTGTCGGGTGGTACCGCCTTCTAACTTCAAACCCGAGTGTAAAGTATCAGACGACATGAGATTTACTGCTTACAATCAGTACATCCACCGCATGCTCCATCGCTGGGGTCCAAATGTAAAGGAAATGATGgctattaaaaagtatttagcTACTCAGAGTATTACTTTGAATCAGCCGCCGTGGATTGGTGGTATGGAAGTCGATTTGCCTCATCTGTATCAAACAGTGCAGAGTCTAGGTGGCCTGAAAGAAGtcatagagaaaaaaaagtggcAGAAGGTTGCCGATGGCATGAAGATTCCTAAATCTGCTCAGGATCGTGTTACCAAGCTAGATGATAtctattgtaaatatttattgccgTATGACACGTTATCTACAGACGAAcgggaaaaattatttgatgaagTGGAAGCTGAGTGGAGAAAACACGAGAGCAAAGCACTCCAGAGACTCAATAGCACGCTGTCAAGTGACAATGACGATGATGAAGACGATGACAGTTCCGATGAAATCGAGGAGTGCATAGTCAAGGGTAGAAATATGCCACTGAATGCTTTCTATAGGATAGCGCGCAACACCCAGCGAATGTGGTTCTCCGATAACCAGAGCACGACTAATGAAGCTGAAGGTGCTTCTGCGAGTGAAGTTGAAAGCGCGTTTTGGAAACATGTTTCTGAACGAAAACGTCATGTCTGTGTTCACGCTGCTAGCATCGATTCAAGTGGCCGCGGTTTCGGATTCTCTGTTGCTAAAAACAGTCCATTCGCACGTCATCCGTGGAATCTTAAAGTCTTGACGAATAATAATGGCTCTGTTCTAAGAGCTCTGGGCCCACTGATGGGCGTAACTGTGCCGACACTCCACGTCGGGATGCTTTTCAGTGCCTGCTGCTGGTACCGTGACCCTCACGGATTACCGTGGATTGAATATCTGCACACTGGtgctaaaaaaatatggtaCGGTATTCCCGACGAGCACAGTGATAATTTTCGAGAAGCTTTGTCGAAAATGGTACCGaggttttgtaaaaataaaacgatttgGCTGCCTTCTGACACTGCTATGGTACCGCCTGAAATGCTTGTCAACAATGGTGTTCCCTTATGTCAAACTGTTCAGGAACCTggacaatttattattgtttttccCAAAGCATTTACTTCGAGTATTTGTACGGGATATGTTGTTTCGGAGAGTGTTTATTTTGCACAAACTACGTGGCTCGAACATGCTGAGCAAATATTcaagGATCTTCAGGATAGCTGTGAACCATCAATGTTTTCATTTGAAAGATTActttttagtattattaatGATACTAGATCTCATGTAGATGTTTTAAAacagatTTTACCGGTTGTTACAAAAATACGAGAGagagaattaaattatcgTCAGCAATTAGAGTATTACGGACTAAtcaacaaagaaaaattaccattacccggtagcggtaaacgtaaaaaagggcaaaaattttcagaagaCGAAGACGATTATGAGTGTGAAAATTGTCGtgctaatttatttgtttcattagTTAATAATTCACAAGACGACAGTGCTTATTGCCTTCCTCATGGACTCCAATTGATTGGACGTAAGAAACAAGTACTTAAAAGTTGTACACTCAAATATACGTATAGTGAggATGAATTAGATGAATTGATTCACAAACTGGAGGATAGAATTGAAGCCAAATCTAAAAGAACTAATCAAACAAGACAAGCTAgactgtaa
Protein Sequence
MVLGRNDKRKRKVGDLVDLMDPLSESPKRAKVHAQRKFAQGSATVFTSPQTLVKEKEKPKPAKVTELITHKRPNTEDFLTFLCFRGTSILPPSLDFFNVGLKKDKAESKTTSKKLNSTSNSSTFTPTPSTSGVGSKAVTNQTTVTKAGATGKVGDPVRKKVTTEIQKPVNKFKSATSTIQALKKKYQEQRLAKQRIENKLKKTCVIRTRSTVGKPLLKSVNKLAPRKFLPRVEPKKHCLRSNTTLEKPFKAFGKVKVISASKGTAKKRAVLKEQSSESSSSESSSEDNKSDIKLTQQIKRTIKSIKKNATTNKPESRRVTRSCTEVTSPAAPVTQLSSQRPSRKTKEAAAVYMEILSRKLVSPDLDNDDNLSVDSYPELPNTRRLVETEAKVKVKKLIKEKNKDKDKDKKEVLSGKSNVAGDKGKEKTAAVVKNKKIAKTQESSESEEESVSSEESTRARRMTRRSSIPSAKPVVARSLRSSSRNSPQKIANSPPAVVGKVKGKTWIRRKRETATSPVEKVKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKKINEKKNKEDKVPEEEFSGVSKVRKKKDDEKVEKLEKEVKKDIEKEKVEKDIKGSDDEESFRGFITKPITKVINSCNSQVSVNLTPSEEVNKKLNALKTTPNTLELRDKVGKAEVPASVNGGEVKSEQKESLSSHVPVVGSLSSQASISESDKKFNCVTNVNTQTTATAAAAAAIIDIPLTTSSLGRKERVNMSTEQIEKWLNESSMAKEESKAEMETVTNFTFEVAGKSKNDMNHLSIPTRIQHLVRPVNVAIAKMAEKTLTKERLSNAVKAATLVNAGTVVGAAAAIAKLSNSANPVLTTNRNKINADIKEIIKGRIAKTGVCTPSKETVCEDSDVSSRADGASTSVEGSPEKKSPDKKLIVQRKTFLPKVKERKIAIPSINAFSPENESSVYAFESDTEAPVNTPFRRKQRDSKSGASGSSDMDVSRTESEDGNTRTPGKLTDKDDKCMSKSKSVGTSIEDVGTEVKSIASSGDKTKQPSSFQIPDTFRNMSNVQVVPLGKIPSVWNNVNCSASIAVQVNFDDQSQNLQNQVAAEESQQRSTEISTQTENTNENEDETDAHVFYIPLQTVSRSGPNLVQGQPLIQGVAVKLGTEGPTGPNQRVLLRAQLVTKPPMAVARCPPVGTVQPTTRTPPTGTSDTVPSTSTSSTSTSTSNLGPVKPRIPGSQTESVAKQTGVAEKITKSPKVSRERKSSADAPKVARKLSAKAKKNAEMIKNIENAFPSMEVKGEARLVDAPTFYPSEKDFQDPLEYIDKIRPIAEKYGICRVVPPSNFKPECKVSDDMRFTAYNQYIHRMLHRWGPNVKEMMAIKKYLATQSITLNQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSTDEREKLFDEVEAEWRKHESKALQRLNSTLSSDNDDDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFSDNQSTTNEAEGASASEVESAFWKHVSERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNNGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHSDNFREALSKMVPRFCKNKTIWLPSDTAMVPPEMLVNNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTTWLEHAEQIFKDLQDSCEPSMFSFERLLFSIINDTRSHVDVLKQILPVVTKIRERELNYRQQLEYYGLINKEKLPLPGSGKRKKGQKFSEDEDDYECENCRANLFVSLVNNSQDDSAYCLPHGLQLIGRKKQVLKSCTLKYTYSEDELDELIHKLEDRIEAKSKRTNQTRQARL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00380088;
80% Identity
-