Mdem002502.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- lov
- Assembly
- GCA_000572035.2
- Location
- NW:1928678-2002324[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4 7e+03 -3.8 0.0 29 39 188 198 188 201 0.78 2 2 2.3e-18 2.1e-15 55.5 0.0 1 44 548 591 548 592 0.96
Sequence Information
- Coding Sequence
- atgtcgAGCACCGCGGAAAGTCCCGACGGTGGCATGGCACTACAGTCCCACTACTCATTACGGTGGAACAACCACCAGTCCCACATTCTCCAGGCCTTCGAGGCACTCCTACACGCCGAGATATTCGTCGATGTCACTCTGTCGTGCTCTGACAGCAGCTTACGTGCTCACAAAGTCGTCCTCAGTGCCTGcagCCCCTTCTTCGAGAGGATATTTGCGGAGCACCCGTGTAAGCATCCGGTGATAGTACTCAAGGACTTTACTGGACGAGAAGTTGCGGCCCTTATAGACTTTATGTATCGCGGGGAAGTAAGAGTGGGACATGAAGACTTACCAGGACTTATGAGAGCCGCTGAGAGTCTACAGGTGAGAGGTTTAGCTTCTTCAGAACCGCGACCTGTTAGTCCGCCCGAGACACCAACGGCAGCTGAAACCCCTTCCGCTGACGACTTGCTCGGTTCAGATCGTTTGACACCAGAGCCAACGCCACATCAGTCGACGAGTCCGCTGGTTGACGACGAGTCTAATTCACCAGCTCGTAGTACCGATTTACATCACAATCCCCATCACACCCTGCACCACCGCATTACTGGCAGTGGTAGTCCAAGTCGAGCTTATATGCGTGATCGTGACAGGTTACCGCATATGagccatttaaatttttcattacggGAATTGCGTGAGTGCACGTCTCCACTAATGCCGAGAAGAAAACAAGCGAGGCCTAGAAGAAGATCTGGTGAATTGATACCACAGGATTTGAGTAAACCCCATCCACAACCAAGTCCTAGTCCACCGGGATTGAATTTTACGACGACAAATAGTCATCATTCTCcgcaaaattttcaatcgattcatcaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcaacaacaacagcaacaacaacaacagcagcaacaacaacaacaacatcttcaacagcaacagcaattAAATAATCGAAATGAAGATATagcagaaaatttatcaatgaaaagATCAGAACCGTCACCAAGCGAGCATGCGATAAAAACTGAAAGTGAGGCAGCGAGTAGTCCCAGAGGTTCACCATTAACTGGAGCAAGTCTTCAACCCGACAGTTCAATCCAAGACCTTCCACCGACGGGGATGCAAGCCTTGTCAGCGTTGTCATTAACGCCTCCTCATCATCACAGCGAGTACCTGGCAAGCTTGAGTCACCTGGCAGCACAATGGGCACCACCTACGAGTCATCCGCAGTCTCAACTGTCGCATCATCACCAACAGCGTGAAGGTAGTCCTCAGGGTCCAAATCGCCTGCACCATCCTTTTCAGCAGGACTCGCCCTTGACACCAAGAAGATCCGTCTTCCCAATGGACGGCTCGTCACCCCTCGGTGGAGGTCTCTTTCCCCATGGAGGACTGGAACGTGGACTCTTGCTCGCGGACTTACACGACAGCTTCAAACCTGAAGCTCTTCATGGACTTTTTGGTGGCGCGAATTTAATTCATCATCCGACGAAGAAGTCAAAGAAACATCGAGGCGAAGATGGACCTCGCAGATGGTCGGACCACTCGCGAATGCCACTCGGGAGACCGAAGGGTCAACACAGCGCACCTCGTGGAGGCCCACCCAGATCTTGGACCAATGCCGAATTGACCGAAGCCCTCCAGCAcgtttggaataaaaaaatgacaaccTCCCAAGCAAGCAGAATCTTCGGGATTCCTTACAACAGTTTGCTGATGTATGTACGTGGCAAGTACGGAAAAAGTCTTAAACTTGAACAGCTCCGCAAAGACTGCACGGGAGCCACCGGTGAGGTTATGAATTCACTAAACAATAATGTCAAAGCAATCGCTCCACCTCCCTCACAACTAACACATCCCCTGGCAGGATTACCTCATCCAGACGATCCAGGATTCCCCCCTCATCCGCTACTGCACCAAGGATTCTACCCGGACTTTGGCACATTCCCCGTGCCTGTTAACATGGTCCATTTGCTGCCACCGAGTGAGCAGAAAGCCTTCGAGTCTCCCAACAACAACAATCCCGGACTCGGTAGTCGCAGCGACAGCCGGGCCGGCGCCGGTCCCTGTGATTTAACGCCACCAAGCCGATCGCCTTCACCTTCACCTGGAGAACGTCTTCTTCACGATATTCCACAGCCACCGCAGTCCGCGCCCGCGTTGCTCCAGCAGAATGGTGCCGAATGA
- Protein Sequence
- MSSTAESPDGGMALQSHYSLRWNNHQSHILQAFEALLHAEIFVDVTLSCSDSSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFTGREVAALIDFMYRGEVRVGHEDLPGLMRAAESLQVRGLASSEPRPVSPPETPTAAETPSADDLLGSDRLTPEPTPHQSTSPLVDDESNSPARSTDLHHNPHHTLHHRITGSGSPSRAYMRDRDRLPHMSHLNFSLRELRECTSPLMPRRKQARPRRRSGELIPQDLSKPHPQPSPSPPGLNFTTTNSHHSPQNFQSIHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHLQQQQQLNNRNEDIAENLSMKRSEPSPSEHAIKTESEAASSPRGSPLTGASLQPDSSIQDLPPTGMQALSALSLTPPHHHSEYLASLSHLAAQWAPPTSHPQSQLSHHHQQREGSPQGPNRLHHPFQQDSPLTPRRSVFPMDGSSPLGGGLFPHGGLERGLLLADLHDSFKPEALHGLFGGANLIHHPTKKSKKHRGEDGPRRWSDHSRMPLGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCTGATGEVMNSLNNNVKAIAPPPSQLTHPLAGLPHPDDPGFPPHPLLHQGFYPDFGTFPVPVNMVHLLPPSEQKAFESPNNNNPGLGSRSDSRAGAGPCDLTPPSRSPSPSPGERLLHDIPQPPQSAPALLQQNGAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003667; iTF_01005353; iTF_01004993; iTF_01004446; iTF_01004155; iTF_01006368; iTF_01005967;
- 90% Identity
- iTF_01006368;
- 80% Identity
- iTF_01003667;