Mdep000552.1
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- lov
- Assembly
- GCA_964016945.1
- Location
- OZ024706.1:285244-287815[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2 2.2e+04 -3.8 0.0 29 39 188 198 188 201 0.78 2 2 2.8e-18 6.7e-15 55.5 0.0 1 44 542 585 542 586 0.96
Sequence Information
- Coding Sequence
- atgtcgAGCACCGCGGAAAGTCCCGACGGTGGCATGGCACTGCAGTCCCACTACTCATTACGGTGGAACAACCACCAGTCCCACATTCTCCAGGCCTTCGAGGCACTCCTACACGCCGAGATATTCGTCGATGTCACTCTGTCGTGCTCTGACAGCAGCTTACGTGCTCACAAAGTCGTCCTCAGTGCCTGcagCCCCTTCTTCGAGAGGATATTTGCGGAGCACCCGTGTAAGCATCCGGTGATAGTACTCAAGGACTTTACTGGACGAGAAGTTGCGGCCCTTATAGACTTTATGTATCGCGGGGAAGTAAGAGTGGGGCATGAAGACTTACCAGGACTTATGAGAGCCGCTGAGAGTCTACAGGTGAGAGGTTTAGCTTCTTCAGAACCGCGACCTGTTAGTCCGCCCGAAACACCAACGGCAGCAGAAACCCCTTCCGCTGACGACTTGCTCGGTTCAGATCGTTTGACACCGGAGCCAACGCCACGGCAGTCAACGAGTCCGCTGGTTGACGACGAGTCTAATTCACCAGCTCGTAGTACCGATTTACATCACAATCCCCATCATACCTTACACCATCGCATTACTGGCAGTGGTAGTCCAAGTCGAGCTTACATGCGTGATCGTGACAGGTTACCGCATATGagccatttaaatttttcattacggGAATTGCGCGAGTGCACGTCTCCACTAATGCCGAGAAGAAAACAAGCGAGGCCTAGAAGAAGATCTGGTGAATTGATACCACAGGATTTGAGTAAACCCCATCCACAACCAAGTCCTAGTCCGCCGGGATTGAATTTTACGACGACAAATAGTCATCATTCTccgcaaaattttcaatcaattcatcaacaacaacagcaacaacaacagcagcaacagcaacaacaacagcaacaacaacaacaacaacaacaacaacatcttcaacagcaacagcaattAAATAATCGAAATGAAGATATAgcagaaaatttatcaatgaaaagATCAGAACCGTCGCCAAGCGAGCATGCGATAAAGACTGAAAGTGAGGCAGCGAGTAGTCCCAGAGGCTCACCATTAACTGGAGCAAGTCTTCAGCCCGACAGTTCAAACCAAGACCTTCCACCGACGGGGATGCAAACCCTGTCAGCGTTGTCATTAACGCCTCCTCATCATCACAGCGAGTACCTTGCGAGCCTAAGTCACCTGGCAGCACAATGGGTACCGCCTACGAGTCATCCGCAGTCTCAACTGTCGCATCATCACCAACAGCGTGAAGACAGTCCTCAGGGTCCAAATCGCCTGCACCATCCTTTTCAGCAGGACTCACCCTTGACACCAAGAAGATCTGTCTTCCCAATGGACGGCTCGTCGCCCCTCGGTGGTGGTCTCTTTCCTCATGGAGGTCTGGAACGCGGACTCTTGCTCGCGGACTTACACGACAGCTTCAAACCTGAAGCTCTTCATGGACTTTTTGGTGGTGCGAATTTAATTCATCATCCGACGAAGAAGTCAAAGAAACACCGAGGCGAAGATGGACCTCGCAGATGGTCGGACCACTCGCGAATGCCACTAGGCAGACCGAAGGGTCAACACAGCGCACCCCGTGGAGGCCCGCCCAGATCTTGGACCAACGCCGAATTGACCGAAGCCCTCCAGCAcgtttggaataaaaaaatgacaaccTCCCAAGCGAGCAGAATCTTCGGGATCCCTTACAACAGTTTGCTGATGTACGTACGTGGCAAGTACGGAAAAAGTCTTAAACTCGAGCAGCTCCGCAAAGACTGTACGGGAGCCACCGGTGAGGTCATGAATTCACTAAACAATAATGTCAAAGCCATCGCTCCACCTCCCTCACAACTAACACATCCTCTAGCAGGATTACCTCATCCAGACGACCCAGGATTCCCTCCCCATCCGCTACTGCACCAAGGATTCTACCCGGACTTTGGCACATTCCCTGTGCCCGTTAACATGGTCCATCTGCTGCCTCCGAGTGAGCAGAAAGCCTTCGAGTCGCCCAACAACAACAATCCCGGACTCGGTAGTCGCAGCGACAGCCGGGCCGGCGCCGGTCCCTGCGATTTAACGCCACCAAGCCGATCGCCTTCACCTTCACCTGGAGAACGTCTTCTTCACGATATTCCACAGCCACCGCAGTCCGCGCCCGCGTTGCTCCAACAGAACGGCGCCGAATGA
- Protein Sequence
- MSSTAESPDGGMALQSHYSLRWNNHQSHILQAFEALLHAEIFVDVTLSCSDSSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFTGREVAALIDFMYRGEVRVGHEDLPGLMRAAESLQVRGLASSEPRPVSPPETPTAAETPSADDLLGSDRLTPEPTPRQSTSPLVDDESNSPARSTDLHHNPHHTLHHRITGSGSPSRAYMRDRDRLPHMSHLNFSLRELRECTSPLMPRRKQARPRRRSGELIPQDLSKPHPQPSPSPPGLNFTTTNSHHSPQNFQSIHQQQQQQQQQQQQQQQQQQQQQQQQHLQQQQQLNNRNEDIAENLSMKRSEPSPSEHAIKTESEAASSPRGSPLTGASLQPDSSNQDLPPTGMQTLSALSLTPPHHHSEYLASLSHLAAQWVPPTSHPQSQLSHHHQQREDSPQGPNRLHHPFQQDSPLTPRRSVFPMDGSSPLGGGLFPHGGLERGLLLADLHDSFKPEALHGLFGGANLIHHPTKKSKKHRGEDGPRRWSDHSRMPLGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCTGATGEVMNSLNNNVKAIAPPPSQLTHPLAGLPHPDDPGFPPHPLLHQGFYPDFGTFPVPVNMVHLLPPSEQKAFESPNNNNPGLGSRSDSRAGAGPCDLTPPSRSPSPSPGERLLHDIPQPPQSAPALLQQNGAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003445;
- 90% Identity
- iTF_01006368;
- 80% Identity
- iTF_01004446;