Mman016414.1
Basic Information
- Insect
- Microplitis manilae
- Gene Symbol
- lov
- Assembly
- GCA_030273425.1
- Location
- CP092724.1:27898983-27901528[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 4e+02 1.9 0.1 25 41 184 200 179 204 0.79 2 2 4.5e-18 7.4e-15 55.5 0.0 1 44 538 581 538 582 0.96
Sequence Information
- Coding Sequence
- atgtcGAGCACCGCGGAAAGTCCCGACGGTGGCATGGCACTACAGTCCCACTACTCATTACGGTGGAACAACCACCAGTCCCACATTCTCCAGGCCTTCGAGGCACTCCTACACGCCGAGATATTCGTCGATGTCACTCTGTCGTGCTCTGACAGCAGCTTACGTGCTCACAAAGTCGTCCTCAGTGCCTGcagCCCCTTCTTCGAGAGGATATTTGCGGAGCACCCGTGTAAGCATCCGGTGATAGTACTCAAGGACTTTACTGGACGAGAAGTTGCGGCCCTTATAGACTTTATGTATCGCGGGGAAGTAAGAGTGGGGCATGAAGACTTACCAGGACTTATGAGAGCCGCTGAGAGTCTACAGGTGAGAGGTTTAGCTTCTTCAGAACCGCGACCTGTTAGTCCGCCCGAGACACCAACGGCAGCAGAAACCCCTTCCGCTGACGACTTGCTCGGTTCAGATCGTTTGACACCGGAGCCAACGCCACGGCAGTCGACGAGTCCGCTGGTTGACGACGAGTCTAATTCACCAGCTCGTAGTACCGATTTACATCACATCCCCCATCACACCCTGCACCACCGCATTACTGGCAGTGGTAGTCCAAGTCGAGCTTATATGCGTGATCGTGACAGGTTACCGCATATGagccatttaaatttttcattacgGGAATTGCGCGAGTGCACGTCTCCACTAATGCCGAGAAGAAAACAAGCGAGGCCTAGAAGAAGATCTGGTGAATTGATACCACAGGATTTGAGTAAACCCCATCCACAACCAAGTCCTAGTCCGCCGGGATTGAATTTTACGACGACAAATAGTCATCATTCTccacaaaattttcaatcaattcatcaacaacaacaacaacaacagcaacaacaacaacaacaacagcagcaacaacaacaacaacatcttcaacagcaacagcaattAAATAATCGAAATGAAGATATAgcagaaaatttatcaatgaaaaGATCAGAACCGTCGCCAAGCGAACATGCGATAAAGACTGAAAGTGAGGCAGCGAGTAGTCCCAGAGGTTCACCATTAACTGGAGCAAGTCTTCAACCCGACAGTTCAATCCAAGACCTTCCACCGACGGGGATGCAAGCCCTGTCAGCGTTGTCATTAACGCCTCCTCATCATCACAGCGAGTACCTGGCGAGCTTAAGTCACCTGGCAGCACAATGGGCACCGCCTACGAGTCATCCGCAGTCTCAACTGTCGCATCATCACCAGCAGCGTGAAGGTAGTCCTCAGGGTCCAAATCGCCTGCACCATCCTTTTCAGCAGGACTCGCCCTTGACACCAAGAAGATCCGTCTTCCCAATGGACGGCTCGTCGCCCCTTGGTGGTGGTCTCTTTCCTCATGGAGGACTGGAACGCGGACTCTTGCTCGCGGACTTACACGACAGCTTCAAACCTGAAGCTCTTCATGGACTTTTTGGTGGCGCGAATTTAATTCATCATCCGACGAAGAAGTCAAAGAAACATCGAGGTGAAGATGGGCCTCGCAGATGGTCGGACCACTCGCGAATGCCACTAGGGAGACCGAAGGGTCAACACAGCGCACCTCGTGGAGGCCCACCCAGATCTTGGACCAACGCCGAATTGACCGAAGCCCTCCAGCAcgtttggaataaaaaaatgacaaccTCTCAAGCAAGCAGAATTTTCGGAATCCCTTACAATAGTTTACTGATGTATGTACGCGGCAAGTACGGAAAAAGTCTTAAACTCGAGCAACTCCGCAAAGACTGCACGGGAGCCACCGGTGAGGTCATGAATTCACTAAACAATAATGTCAAAGCCATCGCTCCACCTCCCTCACAACTAACACATCCCCTGGCAGGATTACCTCATCCAGACGATCCAGGATTCCCTCCCCATCCGCTACTGCACCAAGGATTCTACCCGGACTTTGGCACATTCCCCGTGCCCGTTAATATGGTCCATCTGCTGCCTCCAAGCGAGCAGAAAGCCTTCGAGTCTCCCAACAACAACAATCCCGGACTCGGTAGTCGCAGCGACAGCCGGGCCGGCGCCGGTCCCTGTGATTTAACGCCACCAAGCCGATCGCCTTCACCTTCACCTGGAGAACGTCTTCTTCACGATATTCCACAGCCACCGCAGTCCGCGCCCGCGTTGCTCCAGCAGAATGGTGCCGAATGA
- Protein Sequence
- MSSTAESPDGGMALQSHYSLRWNNHQSHILQAFEALLHAEIFVDVTLSCSDSSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFTGREVAALIDFMYRGEVRVGHEDLPGLMRAAESLQVRGLASSEPRPVSPPETPTAAETPSADDLLGSDRLTPEPTPRQSTSPLVDDESNSPARSTDLHHIPHHTLHHRITGSGSPSRAYMRDRDRLPHMSHLNFSLRELRECTSPLMPRRKQARPRRRSGELIPQDLSKPHPQPSPSPPGLNFTTTNSHHSPQNFQSIHQQQQQQQQQQQQQQQQQQQQHLQQQQQLNNRNEDIAENLSMKRSEPSPSEHAIKTESEAASSPRGSPLTGASLQPDSSIQDLPPTGMQALSALSLTPPHHHSEYLASLSHLAAQWAPPTSHPQSQLSHHHQQREGSPQGPNRLHHPFQQDSPLTPRRSVFPMDGSSPLGGGLFPHGGLERGLLLADLHDSFKPEALHGLFGGANLIHHPTKKSKKHRGEDGPRRWSDHSRMPLGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCTGATGEVMNSLNNNVKAIAPPPSQLTHPLAGLPHPDDPGFPPHPLLHQGFYPDFGTFPVPVNMVHLLPPSEQKAFESPNNNNPGLGSRSDSRAGAGPCDLTPPSRSPSPSPGERLLHDIPQPPQSAPALLQQNGAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01003445;
- 90% Identity
- iTF_01006368;
- 80% Identity
- iTF_01005353;