Mhyp010026.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microctonus hyperodae
Gene Symbol
-
Assembly
GCA_030347285.1
Location
JAQQBR010001833.1:6298466-6302535[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.011 0.79 10.0 2.2 1 23 371 393 371 393 0.97
2 19 0.043 3.1 8.1 0.5 2 23 430 451 429 451 0.94
3 19 0.00039 0.028 14.6 2.3 1 23 521 543 521 543 0.98
4 19 8.1e-05 0.0058 16.7 1.3 2 23 547 568 546 568 0.98
5 19 7.7e-05 0.0056 16.8 1.6 1 23 622 644 622 644 0.99
6 19 3.9e-06 0.00029 20.8 3.9 1 23 649 671 649 671 0.96
7 19 0.00026 0.019 15.1 0.6 1 21 677 697 677 701 0.92
8 19 0.00068 0.049 13.8 1.0 2 23 779 800 778 800 0.95
9 19 0.00017 0.013 15.7 5.0 1 23 853 875 853 875 0.97
10 19 0.00025 0.018 15.2 0.7 1 20 880 899 880 901 0.94
11 19 0.042 3 8.2 0.6 2 23 912 933 912 933 0.97
12 19 9.9e-05 0.0072 16.4 0.4 2 23 972 993 971 993 0.96
13 19 2.9e-05 0.0021 18.1 1.6 1 23 998 1020 998 1020 0.95
14 19 3.1e-05 0.0022 18.0 1.4 1 23 1026 1048 1026 1048 0.99
15 19 7e-06 0.0005 20.1 0.4 1 23 1065 1087 1065 1087 0.95
16 19 1.3e-06 9.4e-05 22.4 0.3 1 23 1093 1115 1093 1115 0.99
17 19 6.5e-05 0.0047 17.0 0.2 1 23 1121 1143 1121 1143 0.98
18 19 0.00013 0.0096 16.0 4.1 1 23 1149 1171 1149 1171 0.96
19 19 0.0094 0.68 10.2 0.4 1 20 1177 1196 1177 1198 0.89

Sequence Information

Coding Sequence
ATGGACGCCGTTGATATTGATACGGCTGGCTCGCCACAAAATGACGACGAACAAGAAGAAGTAACCGTGAACGTTTGTCGTATTTGTCTTGTTGGCAATTTAATTATGAGAGATCTATTTGTTGATGGCGATGTTATATCGCTTTCAACCAAGGCCATGAGTTTTACAAGCGTTAAGATATTACCCGATGATGGTTTACCGTCTCAAGTGTGCTGTGAATGTGCAGACAAGTTGGAGTCAGCATATGATTTTAAACTGCAAGTTGAACAGGCTGACAGTGTTTTGAGAGAACGTTATGATAATCTTCATGTGAAAGatgaactttttttcaatgaagTTGAAGTAGATTTAGAAGGCGAAAGAACAGAAAGTGGAGAGATTGATGTCGATGTACAATATGAAGCTGCTGCAGAAACATTAAATCAACATAATGATTCGGTTGAGGATGAGAAATCAGTGCTATTGATGAAAGATCGTTTGACATTGTTACAAGTGGAAAAACTAGCGGCACAAAATCAACATACATTAGATGATACAATTGTTCATGATGGAGATGATATGCAAGAAGTAATAATGAAAGAGCACATGCTACCATCAGATGAACAATATATCCATGATGtacaaaataatgaacaattaattgGTGATGAAATTGAATCGGCACAATGTGATGATAATATGAAAGCTCATGGGATACAGGAGCAAGATAGTATTATGATTGAGGAGCATAATTATATGATTCAACAGGAATATCAATTATCAAGTGAACAAGAGCAAGAATTAATGAATCAAGAGGGTGAGGCAAATGATCACGATGCAGTAGAATATTTGTCGATGATTGGTGAAGACGAATCAGAACAAAAAGATACAGCAAATGATATGGGAACACTTGAAGATGATAAATCTGAGTGTATTAATGAAGTGGGCGAACAAgagaaaaatgatgatgatgcagaAGTAGTGTTGGCAACACGTAAGAGTCGACGTAAATCCTCACGTCGAAATCAAATGGACGTTACAAATATATCcaatgaagataattatttcgAGAATCTCAATTTAAGCAGTCGATTGACACAATATGAAGTTGAAAAATcggaaaaaattttctttatgtgTTATATGTGCGATAAAGAATTCCTTTCCAAGGATGTATTGAAAGAGCATATGCATTCACATGAGGAAGTACGTCGTGCATTGGGTCAAAAGAAGACATTGGAAAAATCccaacataaaaatacatcgCCATTGTCAAAAAGTCAACCGCCATCAggaaaaaaagcaaataaatgcCCATACTGTGGTAAAGAATATCTCtatgttatttcatttaataaacacGTAAAACAACATCAAAAGAATGACGATAAAATGAAGGACGGTTCTGATAATTTACATCAATCAGacgaatcaattgaatttgaagattttgataataatgacacatttgaaataattactgaTGAAATTGTTGGAAACGAAgtggaatataataatgataatgacgGTGAATATAATGACGATGAAAATACATCGGGAAAACAGTCTGTTGTAGAATTTTATAAGTGTGATAAATGTCCAGAACATTTTGTCTCTAAATTGGATTTCAAACGACACGCCATTCGGCACGTACCGCAAAAGTGTAATATATGCAATGAAGAATTTGATTCTTCAGAAAAATTACGTAATCATCGCTCGACACATGTTATCGAAGGGGTCATAACTGAACAGGATCTTAAAGATGAACTTGTCAGTATGTGTGATACTAAAGAATATTATGGAGAAGATGGTGAAGAACAACTTAATCAAATTGACGATAATGAACCGAATCCTATGGAGTATTCAAATAAAGAATCAAATGAATTCAAATGTCCAAATTGTTCTTTGCTATTTAGCACAAAGAAAACTCTCTTGAAACATTTAGAAACACACGAGGGTGTGCGTTATCGATGCAaaatttgtaatgaaaaattcacacGCAAGGATCATTTACGTAAGCACGCAGAGCAACACGGACGAATGAAAGCATTTAAATGCACTGAGTGTAATAAAACTTTTGGCAATGAATTAACATTAAGAAACCATTTAATAGCGACAAATCATAAAACAATACTGCAAGGTGAGGAGTATGAtccaaataaaagaataaaacgtGTCGCGGCTAAAGCAGCgcagaaaattattgataaaatcagTACAGAGGATGGTTTGGATGATTCAGATAGAGATGATgacaatgatgaatttatttctaaagttGATGCAACGGGCAGTGGAAAAAGTGGCGAACGATTGCAAACATCATCGCGGAGAGGTGGAAATAAAAAGGATCTTGAGTGTGCTACATgtggaaaaaaatgtatttctaAACAGGCATTAGCTAAGCACATGGAATTTCATgtgaaaggagaaaaaaatgagcaaatggagaagaagaaaaataccGAGTCGAAggataatacaaaaaattctaatacaaTATTCGGTGATGATAgagatgacgatgatgatgatgatggcgaTTTTGATGGTGGATTAGATTGGCCAATGGATAACCATGAGTGTACAACTTGTAAAAAACGTTACAgcacaaaaaaatcattattacgaCATCAATTACTTCATGAGGAGCCGAATTTTGAATGTGATATTTGTAACGTTAAATTTTATCGAAAGGACAAATTGAAAGCGCATTATGACAAATGTTCCGAGAAAAATCCTAATCAAGTAAGAAAGTGTAATATATGCGGGGATACATttgaaaacaatgaaatacTTCGTGAACATAGATCGAAACACGTTGATGAGGGAATATTAACTGAAGAAGATTTACGAGAATTGGAGCCTGGTTCTGAGGAAAAAAAACGTGGTGAAAAGATTGCACGAAAACGACGAACTGACATTGTTGGATTGGAATGCCTTGAATGTAATAAACAATACACATCAAGAAAGGGTTTATTGCGACATATACAAGTGCATGAgggtaaaaaatttctttgcgAAATTTGTCCGAAGAAATTTTATCGCCGTGAACATTTGAAAATACACGTGGCAAAACACAATATGATTAAGCCATATAAATGTTCACGTTGTTCAAAACGTTTTATCAAAGAGGATCAATTAGCGACGCATATGATTAAACACGAaagaacatttaaaaaaagtaaagaaacaAACAGCAGTGCAAAGAgatttttatgtgaaatatgCTCAAAGAGCTTTACACAATCTACAACCTTGGTTGCTCATTTACGTGCACATAATGGAATTAAACCGTATGTATGTGAAGTTTGTGCACGTCCATTTACAACAAACGCCTATTTGAAAATGCACATGCGAACCCACACGCAAGAGAGGCCATACACCTGTCAATATTGTGCCAGGGCTTTTGCACGTGCTGATACACTTGCAAATCATTTAACTTCACATACGGGTGAGGCCAAATATCATTGCAAATATTGTCCGAAAAATTTTAGACGACTTAAGTCACTCAAGGAGCATGTTTTCATTCATACTGGACAAAGACCGTATGCATGTCCAACGTGCGATCgaagatttaataataatggtagTCGTTATGCACACAGCAAGAGATGCAAACAAAATATGTTACAAAATCAAATGAGACAGACTCAGAATGAGACACAGACAACAATGCAAACTGCTGTTGTACAACAGCCACAGAATCCAATGCAACAGACAATTAGATTGACACAAGCAGTTGGACCCACAATGCAAGTTGTAcagtcaaaaaatattaaaaccatTACGATAACACGACATCCAGATCAAATTGCAACGCATCAAGTGATGCAACATCAGGATATACTTATGCCAATTATTTTACCGCTTGCTGTTACTCTTGCTGATATTGATGAAGAGGTAATATTGCCAGAAGGCACCAAAATATTTACGACAGCGTAA
Protein Sequence
MDAVDIDTAGSPQNDDEQEEVTVNVCRICLVGNLIMRDLFVDGDVISLSTKAMSFTSVKILPDDGLPSQVCCECADKLESAYDFKLQVEQADSVLRERYDNLHVKDELFFNEVEVDLEGERTESGEIDVDVQYEAAAETLNQHNDSVEDEKSVLLMKDRLTLLQVEKLAAQNQHTLDDTIVHDGDDMQEVIMKEHMLPSDEQYIHDVQNNEQLIGDEIESAQCDDNMKAHGIQEQDSIMIEEHNYMIQQEYQLSSEQEQELMNQEGEANDHDAVEYLSMIGEDESEQKDTANDMGTLEDDKSECINEVGEQEKNDDDAEVVLATRKSRRKSSRRNQMDVTNISNEDNYFENLNLSSRLTQYEVEKSEKIFFMCYMCDKEFLSKDVLKEHMHSHEEVRRALGQKKTLEKSQHKNTSPLSKSQPPSGKKANKCPYCGKEYLYVISFNKHVKQHQKNDDKMKDGSDNLHQSDESIEFEDFDNNDTFEIITDEIVGNEVEYNNDNDGEYNDDENTSGKQSVVEFYKCDKCPEHFVSKLDFKRHAIRHVPQKCNICNEEFDSSEKLRNHRSTHVIEGVITEQDLKDELVSMCDTKEYYGEDGEEQLNQIDDNEPNPMEYSNKESNEFKCPNCSLLFSTKKTLLKHLETHEGVRYRCKICNEKFTRKDHLRKHAEQHGRMKAFKCTECNKTFGNELTLRNHLIATNHKTILQGEEYDPNKRIKRVAAKAAQKIIDKISTEDGLDDSDRDDDNDEFISKVDATGSGKSGERLQTSSRRGGNKKDLECATCGKKCISKQALAKHMEFHVKGEKNEQMEKKKNTESKDNTKNSNTIFGDDRDDDDDDDGDFDGGLDWPMDNHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLRELEPGSEEKKRGEKIARKRRTDIVGLECLECNKQYTSRKGLLRHIQVHEGKKFLCEICPKKFYRREHLKIHVAKHNMIKPYKCSRCSKRFIKEDQLATHMIKHERTFKKSKETNSSAKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQYCARAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQMRQTQNETQTTMQTAVVQQPQNPMQQTIRLTQAVGPTMQVVQSKNIKTITITRHPDQIATHQVMQHQDILMPIILPLAVTLADIDEEVILPEGTKIFTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01000746;
90% Identity
iTF_01001569;
80% Identity
-