Basic Information

Insect: Microctonus brassicae
Gene Symbol: -
Assembly: GCA_940306215.1
Location: OW675808.1:7384191-7388261[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.011 1.1 10.0 2.2 1 23 370 392 370 392 0.97

2 19 0.043 4.4 8.1 0.5 2 23 429 450 428 450 0.94

3 19 0.00038 0.039 14.6 2.3 1 23 520 542 520 542 0.98

4 19 6.1e-05 0.0062 17.1 1.0 2 23 546 567 545 567 0.97

5 19 7.6e-05 0.0077 16.8 1.6 1 23 621 643 621 643 0.99

6 19 9.5e-06 0.00097 19.6 2.8 1 23 648 670 648 670 0.96

7 19 0.00087 0.089 13.4 0.4 1 21 676 696 676 700 0.92

8 19 0.00057 0.058 14.0 1.0 2 23 778 799 777 799 0.95

9 19 0.00017 0.017 15.7 5.0 1 23 853 875 853 875 0.97

10 19 0.00024 0.025 15.2 0.7 1 20 880 899 880 901 0.94

11 19 0.041 4.2 8.2 0.6 2 23 912 933 912 933 0.97

12 19 2.5e-05 0.0025 18.3 0.6 2 23 972 993 971 993 0.97

13 19 2.3e-05 0.0023 18.4 1.6 1 23 998 1020 998 1020 0.95

14 19 6.1e-05 0.0063 17.1 2.1 1 23 1026 1048 1026 1048 0.98

15 19 6.8e-06 0.0007 20.1 0.4 1 23 1065 1087 1065 1087 0.95

16 19 1.3e-06 0.00013 22.4 0.3 1 23 1093 1115 1093 1115 0.99

17 19 6.4e-05 0.0066 17.0 0.2 1 23 1121 1143 1121 1143 0.98

18 19 0.00013 0.013 16.0 4.1 1 23 1149 1171 1149 1171 0.96

19 19 0.0092 0.94 10.2 0.4 1 20 1177 1196 1177 1198 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.011	1.1	10.0	2.2	1	23	370	392	370	392	0.97
2	19	0.043	4.4	8.1	0.5	2	23	429	450	428	450	0.94
3	19	0.00038	0.039	14.6	2.3	1	23	520	542	520	542	0.98
4	19	6.1e-05	0.0062	17.1	1.0	2	23	546	567	545	567	0.97
5	19	7.6e-05	0.0077	16.8	1.6	1	23	621	643	621	643	0.99
6	19	9.5e-06	0.00097	19.6	2.8	1	23	648	670	648	670	0.96
7	19	0.00087	0.089	13.4	0.4	1	21	676	696	676	700	0.92
8	19	0.00057	0.058	14.0	1.0	2	23	778	799	777	799	0.95
9	19	0.00017	0.017	15.7	5.0	1	23	853	875	853	875	0.97
10	19	0.00024	0.025	15.2	0.7	1	20	880	899	880	901	0.94
11	19	0.041	4.2	8.2	0.6	2	23	912	933	912	933	0.97
12	19	2.5e-05	0.0025	18.3	0.6	2	23	972	993	971	993	0.97
13	19	2.3e-05	0.0023	18.4	1.6	1	23	998	1020	998	1020	0.95
14	19	6.1e-05	0.0063	17.1	2.1	1	23	1026	1048	1026	1048	0.98
15	19	6.8e-06	0.0007	20.1	0.4	1	23	1065	1087	1065	1087	0.95
16	19	1.3e-06	0.00013	22.4	0.3	1	23	1093	1115	1093	1115	0.99
17	19	6.4e-05	0.0066	17.0	0.2	1	23	1121	1143	1121	1143	0.98
18	19	0.00013	0.013	16.0	4.1	1	23	1149	1171	1149	1171	0.96
19	19	0.0092	0.94	10.2	0.4	1	20	1177	1196	1177	1198	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTTGATATTGATACGGCTGGCTCGCCACAAAATGACGATGAACAAGAAGAAGTAGCCGTGAACGTTTGTCGTATTTGTCTCGTTGGCAATTTAATTATGAGAGATCTATTTGTTGATGGCGATGTGATATCGCTTTCAACCAAGGCCATGAGCTTTACAAGCGTTAAGatATTACCTGATGATGGTTTACCGTCTCAAGTGTGCTGTGAATGTGCAGACAAATTGGAGTCAGCATATGATTTTAAACTGCAAGTTGAACAGGCTGACAGTGTTTTGAGAGAACGTTATGATAATCTTAATGTGAAAGATGaactttttttcaatgaagttGAGGTACATTTAGAAGGCGAGAGAACAGAAAATGGAGAGATTGATGTTGATGTACAATATGAAGCTGCAGCAGAAACATTAAATCAACATAATGGTTCGGTTGAGGATGAGAAATCAGTGCTATTAATGAAAGATCGTTTGACATTGTTACAAGTTGAAAAACTCTCGGCACAAAATCAACATACATTAGATGATACAATTGATGCCCATGATGGAGATGATATGCAAGaagtaataatgaaagaaCACATGTTACCATCAGatgaacaatatatacatgatgtaCAAAATGATGACCAATTAATTGGTGATGAAATTGAATCGGCACAATGTGATGATAATATGAAAGCTAATGGGATACAGGAGCAAGATAGTATTATGATTGAAGAGCATAATTATATGATTCAACAGGAATATCAATTGTCAAGTGAACAAGAGCAAGAATTAATGAATCAAGAGAGTGATGCAAATGATCATGATGCAGTAGAATATTTGTCGATGATTGGTGAAGACGAAGCAGAACAGAAAGATGCAGCGAATGAAATGTCAACACTTGAAGATGATAAATCTGAATGCATTAATGAAGTGTGCGAACaagagaaaaatgatgaagaaatcgTGTTGGGAACACGTAAAAGTCGACGTAAATCTTCACGTCGAAATCAAATGGACGTTACAAATATATCCaatgaagataattattttgagaatCTCAATTTAAGCAGTCGATTGACACAATATGAAGTTGAAAAAtcggaaaaaattttcttcatgtgTTATATGTGCGATAAAGAATTCCTTTCCAAGGATGTATTGAAAGAGCATATGCATTCACATGAAGAAGTACGTCGTGCATTGGGTCAAAAAAAGACATTagaaaaatcacaaaataaaaatacatcgcCATTGTTAAAAAGTCAACCGCCATCAggaaaaaaagcaaataaatgtCCATACTGTGGTAAAGAATATCTCtatgttatttcatttaataaacacGTAAAACAGCATCAAaagaatgatgataaaatgaagGACGGTTctgataattttcatcaacaagatgaatcaattgaatttgaagattttgataataacgacacatttgaaattattactgATGAAATTGTTGGACACGAAgtggaatataataatgataatggcgatgaatataatgatgatgaaaatacatCGGGAAAACAAGCTGTTATAGAACTTTATAAGTGTGATAAATGCCCAGAACATTTTGTATCTAAATTGGATTTCAAACGACACGCAATTCGGCACGTACCGCAAAAGTGCAATATATGCGATGAAGAATTTGAATCTTCAGAAAAATTACGTAATCATCGCACGACACATGTTATCGAAGGGGTCATAACCGAACAGGATCTTAAAGATGAACTTGTAAGTATGTGTGATAGTAAAGAATACTATGGAGAAGATGGTGAAGAACAACTCGATTCAATTGACGATAATGAACCGAATCATATGGAGTATTCAACTAAAGAATCAAATGAATTCAAATGTCCAAATTGTTCTTTGCTATTTAGTACAAAGAAAACTCTTTTGAAACATTTGGAAACACACGAGGGTGTGCGTTATCGATGCAAAATTTGTAGTGAAGAATTCACACGCAAGGATCATTTACGTAAGCACGCAGAGCAACACGGACGAATGAAAGCATTTAAATGCACAgagtgtaataaaatttttggcaATGAATTGACATTAAGAAACCATTTAATAGCGACAAATCATAAAACAATACTACAAGGTGAGGAGTATGATccaaataaaagaataaaacgtGTGGCGGCTAAAGCAGCgcagaaaattattgataaaattagcACAGAAGATGGTTTGGATGATTCAGATAGAGATGAGgacaatgatgaatttatttcgaaaGTTGATGCAACGGGCAGTGGAAAAAGTGGTGAACGATTGCAAACATCATCGCGAAGAAGTGGAAATAAAAAGGATCTTGAGTGTGCTACATGTGGAAAAAGATGTATTTCTAAACAGGCATTAGCTAAGCACATGGAATTTCATGTGAAAGGAGAAAAAACTGAGCAAATGGAGAaggcaaagaaaaataacgaGTCAAAGGATAATACGAAAAATTCTAATACAATTTTTGGTGACGATAgagatgatgacgatgatgatgatggcgaTTTTGATGGTGGATTGGATTGGCCAATGGATAATCATGAGTGCACAACCTGCAAAAAACGTTACAgcacaaaaaaatcattattacgACATCAATTACTTCATGAGGAGCCGAATTTTGAATGTGATATTTGTAACGTTAAATTTTATCGAAAGGACAAATTAAAAGCGCATTATGACAAATGTTCCGAGAAAAATCCTAATCAAGTAAGAAAGTGTAATATATGCGGGGatacatttgaaaataatgaaatacttCGTGAACATAGATCGAAACATGTTGACGAGGGAATATTAACTGAAGAAGATTTACGAGAATTGGAGCCTGGTTCTGAGGGAAGAAAACGCGGTGAAAAAATTGCACGAAAACGACGAACAGATATTGTTGGATTGGAATGCACTGAGTGTAATAAACAATACACATCAAGAAAGGGTCTATTACGACATATACAAGTGCATGAGGGTAAAAAATATCTTTGCGATATTTGTCCGAAGAAATTTTATCGTCGTGAACATTTGAAAATACACGTGGCAAAACACAATATGGTTAAGCCATATAAATGTACACGTTGTTCAAAACGTTTCATCAAAGAGGATCAATTAACGGCGCATTTGACTAAACACGAAAGGacatttaaaaaaagtaaagaaacaGACAGTACTGCAAAGAgatttttatgtgaaatatgCTCAAAGAGCTTTACACAATCTACAACCTTGGTAGCTCATTTACGTGCACATAATGGAATTAAACCGTATGTATGTGAAGTTTGTGCACGTCCATTTACAACAAATGCCTATTTAAAAATGCACATGCGAACCCACACGCAAGAGAGGCCATACACCTGTCAATATTGTGCCAGAGCTTTTGCACGAGCTGATACACTTGCAAATCACTTGACTTCACATACAGGTGAAGCTAAATATCATTGCAAATATTGTCCGAAAAATTTTAGACGACTTAAATCACTCAAGGAGCatgtttttattcatactgGACAAAGACCGTATGCATGTCCAACATGCGATCGTAGATTTAACAATAATGGTAGTCGTTATGCACACAGCAAAAGATGCAAACAAAATATGTTACAAAATCAAATGAGACAAAATCAGAATGAAACACAGACAACAACGCAAACTGCTGTTGTCCAGCAGCCACAGAGTCCAATGCAACAGACAATTAGATTGGCACAAGCAGTTGGACCCACAATGCAAGTTGTAcagtcaaaaaatattaaaacgatTACGATAACACGACATCCGGATCAAATTGCAACGCATCAAGTGATGCAACATCAGGATATACTCATGCCAATTATTTTACCGCTTGCTGTTACTCTTGCTGATATTGATGAAGAGGTAATATTGCCAGAAGGCACCAAAATATTCACGACAGCGTAA
Protein Sequence: MDAVDIDTAGSPQNDDEQEEVAVNVCRICLVGNLIMRDLFVDGDVISLSTKAMSFTSVKILPDDGLPSQVCCECADKLESAYDFKLQVEQADSVLRERYDNLNVKDELFFNEVEVHLEGERTENGEIDVDVQYEAAAETLNQHNGSVEDEKSVLLMKDRLTLLQVEKLSAQNQHTLDDTIDAHDGDDMQEVIMKEHMLPSDEQYIHDVQNDDQLIGDEIESAQCDDNMKANGIQEQDSIMIEEHNYMIQQEYQLSSEQEQELMNQESDANDHDAVEYLSMIGEDEAEQKDAANEMSTLEDDKSECINEVCEQEKNDEEIVLGTRKSRRKSSRRNQMDVTNISNEDNYFENLNLSSRLTQYEVEKSEKIFFMCYMCDKEFLSKDVLKEHMHSHEEVRRALGQKKTLEKSQNKNTSPLLKSQPPSGKKANKCPYCGKEYLYVISFNKHVKQHQKNDDKMKDGSDNFHQQDESIEFEDFDNNDTFEIITDEIVGHEVEYNNDNGDEYNDDENTSGKQAVIELYKCDKCPEHFVSKLDFKRHAIRHVPQKCNICDEEFESSEKLRNHRTTHVIEGVITEQDLKDELVSMCDSKEYYGEDGEEQLDSIDDNEPNHMEYSTKESNEFKCPNCSLLFSTKKTLLKHLETHEGVRYRCKICSEEFTRKDHLRKHAEQHGRMKAFKCTECNKIFGNELTLRNHLIATNHKTILQGEEYDPNKRIKRVAAKAAQKIIDKISTEDGLDDSDRDEDNDEFISKVDATGSGKSGERLQTSSRRSGNKKDLECATCGKRCISKQALAKHMEFHVKGEKTEQMEKAKKNNESKDNTKNSNTIFGDDRDDDDDDDGDFDGGLDWPMDNHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLRELEPGSEGRKRGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCTRCSKRFIKEDQLTAHLTKHERTFKKSKETDSTAKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQYCARAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQMRQNQNETQTTTQTAVVQQPQSPMQQTIRLAQAVGPTMQVVQSKNIKTITITRHPDQIATHQVMQHQDILMPIILPLAVTLADIDEEVILPEGTKIFTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01000746;
90% Identity: iTF_01000746; iTF_01002254;
80% Identity: -