Maet012355.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- -
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010001424.1:2117721-2121788[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.011 0.95 10.0 2.2 1 23 369 391 369 391 0.97 2 19 0.042 3.8 8.1 0.5 2 23 428 449 427 449 0.94 3 19 0.00037 0.034 14.6 2.3 1 23 519 541 519 541 0.98 4 19 6e-05 0.0054 17.0 1.1 2 23 545 566 544 566 0.97 5 19 7.4e-05 0.0067 16.8 1.6 1 23 620 642 620 642 0.99 6 19 9.3e-06 0.00083 19.6 2.8 1 23 647 669 647 669 0.96 7 19 0.00085 0.076 13.4 0.4 1 21 675 695 675 699 0.92 8 19 0.00065 0.059 13.8 1.0 2 23 777 798 776 798 0.95 9 19 0.00017 0.015 15.7 5.0 1 23 852 874 852 874 0.97 10 19 0.00024 0.021 15.2 0.7 1 20 879 898 879 900 0.94 11 19 0.04 3.6 8.2 0.6 2 23 911 932 911 932 0.97 12 19 2.4e-05 0.0022 18.3 0.6 2 23 971 992 970 992 0.97 13 19 2.2e-05 0.002 18.4 1.6 1 23 997 1019 997 1019 0.95 14 19 6e-05 0.0054 17.1 2.1 1 23 1025 1047 1025 1047 0.98 15 19 6.7e-06 0.0006 20.1 0.4 1 23 1064 1086 1064 1086 0.95 16 19 1.2e-06 0.00011 22.4 0.3 1 23 1092 1114 1092 1114 0.99 17 19 6.3e-05 0.0057 17.0 0.2 1 23 1120 1142 1120 1142 0.98 18 19 0.00013 0.011 16.0 4.1 1 23 1148 1170 1148 1170 0.96 19 19 0.009 0.81 10.2 0.4 1 20 1176 1195 1176 1197 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTTGATATTGATACGGCTGGCTCGCCACAAAATGACGATGAACAAGAAGAAGTAGCCGTGAACGTTTGTCGTATTTGTCTTGTTGGCAATTTAATTATGAGAGACCTATTTGTTGATGGCGATGTGATATCGCTTTCAACCAAGGCCATGAGTTTTACAAGCGTTAAGatattacCCGATGATGGTTTACCGTCTCAAGTGTGCTGTGAATGTGCAGACAAATTGGAGTCAGCATATGATTTTAAACTGCAAGTTGAACAGGCTGATAGTGTTTTGAGAGAACGTTATGATAATCTTAATGTGAAAGATGaactttttttcaatgaagTTGAGGTAGATTTAGAAGGCGAAAGAACAGAAAGTGGAGAGATTGATGTTGATGAACAATATGAAGCTGCTGCAGAAACATTAAATCAACATAATGATTCGGTTGAGGATGAGAAATCAGTGCTATTAATGAAAGATCGTTTGACATTGTTACAAGTTGGAAAACTCTCGGCACAAAATCAACATACATTAGATGATACAATTGCCCATGATGGAGATGAAATGCAAGAAGTAATAATGAAAGAACACATGTTACCATCAGatgaacaatatatacatgatgtaCAAAATGATGATCAATTAATTGGTGATGAAATTGAATCGGCACAATGTGATGATAATATGAAAGCTAATGGGATACAGGAGCAAGATAGTATTATGATTGAAGAGCATAATTATATGATTCAACAAGAATATCAATTGTCAAGTGAACAAGAGCAAGAATTAATGAATCAAGAGAGTGATGCAAATGATCATGATGCAGTAGAATATTTGTCGATGATTGGTGAAGACGAAACAGAACAGAAAGATGCAGCAAATGAAATGTCAACACTTGAAGATGATAAATCTGAATGCATTAATGAAGTGTGCGAACAAGAGAAAAATGATGCAGAAGTCGTGCTGGGAACACGTAAAAGTCGACGTAAATCTTCACGTCGAAATCAAATGGACATTACAAATATATCCaatgaagataattattttgagaatCTCAATTTAAGCAGTCGATTAACACAATATGAAGTTGAAAAAtcggaaaaaattttcttcatgtgCTATATGTGTGATAAAGAATTCCTTTCCAAGGATGTATTGAAAGAGCATATGCATTCACATGAAGAAGTGCGTCGTGCAATGGGTCAAAAAAAGACATTagaaaaatcacaaaataaaaatacatcgcCATTGTCAAAAAGTCAACCGCCATCAggaaaaaaagcaaataaatgTCCATACTGTGGTAAAGAATATCTCtatgttatttcatttaataaacacGTAAAACAGCATCAAaagaatgatgataaaatgcaGGATGGTTctgataattttcatcaacaagatgaatcaattgaatttgaagattttgataataacgacacatttgaaattattactgATGAAATTGTTGGAAACGAAgtggaatataataatgataatggcgatgaatataatgatgatgaaaatacatcGGGAAAACAAGGTGTTATAGAACTTTATAAGTGTGATAAATGTCCAGAACATTTTGTATCTAAATTGGATTTCAAACGACACGCAATTCGGCACGTACCACAAAAGTGCAATATATGCGATGAAGAATTTGATTCTTCAGAAAAATTACGTAATCATCGCACGACACATGTTATCGAAGGGGTCATAACCGAACAGGATCTTAAAGATGAACTTGTGAGTATGTGTGATAGTAAAGAATACTATGGAGAAGATGGTGAAGAACAACTCGATCAAATTGACGAGAATGAACCGAATCATTTAGAGTATTCAACTAAAGaatcaaatgaattcaaatgtcCAAATTGTTCTTTGCTATTTAGCACAAAGAAAACTCTTTTGAAACATTTGGAAACACACGAGGGTGTGCGTTATCGATGCAAAATTTGTAGTGAAGAATTCACACGCAAGGATCATTTACGTAAGCATGCAGAGCAACATGGACGAATGAAAGCATTTAAATGCACTgagtgtaataaaatttttggcaATGAATTGACATTAAGAAACCATTTAATAGCGACAAATCATAAAACAATACTACAAGGTGAGGAGTATGATccgaataaaagaataaaacgtGTGGCGGCTAAAGCAGCgcagaaaattattgataaaattagcACAGAAGATGGTTTGGATGATTCAGATAAAGATGAagacaatgatgaatttatttcgaaAGTTGATGCAACGGGTAGTGGAAAAAGTGGTGAACGATTGCAAACATCATCGCGAAGAAGTGGAAATAAAAAGGATCTTGAGTGTGCTACatgtggaaaaaaatgtatttctaAACAGGCATTAGCTAAGCACATGGAATTTCATGTGAAAGGAGAAAAAAGTGAGCAAATGGAgaaagcaaagaaaaataacgaGTCAAAGGATAATACGAAAAATTCTAATACAATTTTTGGCGACGATAGagatgacgacgatgatgatgatggcgaTTTTGATGGTGGATTGGATTGGCCAATGGATAATCATGAGTGTACAACCTGCAAAAAACGTTACAgcacaaaaaaatcattattacgCCATCAATTACTTCATGAGGAGCCGAATTTTGAATGTGATATTTGTAACGTTAAATTTTATCGAAAGGACAAATTAAAAGCGCATTATGACAAATGTTCCGAGAAAAATCCTAATCAAGTaagaaaatgtaatatatgcGGGGatacatttgaaaataatgaaatacttCGTGAACATAGATCAAAACATGTTGACGAGGGAATATTAACTGAAGAAGATTTACGAGAATTGGAGCCTGGTTCTGAGGGGAGAAAACGCGGTGAAAAAATTGCACGAAAACGACGAACTGACATTGTTGGATTGGAATGCACTGAATGTAATAAACAATACACATCAAGAAAGGGTTTATTACGACATATACAAGTGCATGAGGgtaaaaaatatctttgtgATATTTGTCCGAAGAAATTTTATCGTCGTGAACATTTGAAAATACACGTGGCAAAACACAATATGGTTAAGCCATATAAATGTACACGTTGTTCAAAACGTTTCATCAAAGAAGATCAATTAACGGCGCATTTGACTAAACACGAAAGgacatttaaaaaaagtaaagaaacaGACAGTACTGCAAAGAgatttttatgtgaaatatgCTCAAAGAGCTTTACACAATCTACAACCTTGGTAGCTCATTTACGTGCACATAATGGAATTAAACCGTATGTATGTGAAGTTTGTGCACGTCCATTTACAACAAACGCCTATTTAAAAATGCACATGCGAACCCACACGCAAGAGAGGCCATACACCTGTCAATATTGTGCCAGAGCTTTTGCACGAGCTGATACACTTGCAAATCATTTGACTTCACATACAGGTGAAGCTAAATATCATTGCAAATATTGTCCGAAAAATTTTAGACGACTTAAATCACTCAAGGAGCATGTTTTCATTCATACTGGACAAAGACCGTATGCATGTCCAACATGCGATCgtagatttaataataatggtagTCGTTATGCACACAGCAAAAGATGCAAACAAAATATGTTACAAAATCAGATGAGACAGAATCAGAATGAAACACAAACAACAACGCAAACTGCTGTTGTTCAGCAGCCACAGAGTCCAATGCAACAGACAATTAGATTGGCACAAGCAGTTGGACCCACAATGCAAGTTGTAcagtcaaaaaatattaaaactattaCGATAACACGACATCCAGATCAAATTGCAACGCATCAAGTGATGCAACATCAGGATATACTCATGCCAATTATTTTACCGCTTGCTGTTACTCTTGCTGATATTGATGAAGAGGTAATATTGCCAGAAGGCACCAAAATATTTACGACAGCGTAA
- Protein Sequence
- MDAVDIDTAGSPQNDDEQEEVAVNVCRICLVGNLIMRDLFVDGDVISLSTKAMSFTSVKILPDDGLPSQVCCECADKLESAYDFKLQVEQADSVLRERYDNLNVKDELFFNEVEVDLEGERTESGEIDVDEQYEAAAETLNQHNDSVEDEKSVLLMKDRLTLLQVGKLSAQNQHTLDDTIAHDGDEMQEVIMKEHMLPSDEQYIHDVQNDDQLIGDEIESAQCDDNMKANGIQEQDSIMIEEHNYMIQQEYQLSSEQEQELMNQESDANDHDAVEYLSMIGEDETEQKDAANEMSTLEDDKSECINEVCEQEKNDAEVVLGTRKSRRKSSRRNQMDITNISNEDNYFENLNLSSRLTQYEVEKSEKIFFMCYMCDKEFLSKDVLKEHMHSHEEVRRAMGQKKTLEKSQNKNTSPLSKSQPPSGKKANKCPYCGKEYLYVISFNKHVKQHQKNDDKMQDGSDNFHQQDESIEFEDFDNNDTFEIITDEIVGNEVEYNNDNGDEYNDDENTSGKQGVIELYKCDKCPEHFVSKLDFKRHAIRHVPQKCNICDEEFDSSEKLRNHRTTHVIEGVITEQDLKDELVSMCDSKEYYGEDGEEQLDQIDENEPNHLEYSTKESNEFKCPNCSLLFSTKKTLLKHLETHEGVRYRCKICSEEFTRKDHLRKHAEQHGRMKAFKCTECNKIFGNELTLRNHLIATNHKTILQGEEYDPNKRIKRVAAKAAQKIIDKISTEDGLDDSDKDEDNDEFISKVDATGSGKSGERLQTSSRRSGNKKDLECATCGKKCISKQALAKHMEFHVKGEKSEQMEKAKKNNESKDNTKNSNTIFGDDRDDDDDDDGDFDGGLDWPMDNHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLRELEPGSEGRKRGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCTRCSKRFIKEDQLTAHLTKHERTFKKSKETDSTAKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQYCARAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQMRQNQNETQTTTQTAVVQQPQSPMQQTIRLAQAVGPTMQVVQSKNIKTITITRHPDQIATHQVMQHQDILMPIILPLAVTLADIDEEVILPEGTKIFTTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001569; iTF_01002254;
- 90% Identity
- iTF_01001569;
- 80% Identity
- -