Basic Information

Insect: Microctonus brassicae
Gene Symbol: Hr39
Assembly: GCA_940306215.1
Location: OW675807.1:8766709-8770171[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.19 9.5e+02 -0.9 1.3 51 73 42 59 12 109 0.41

2 5 0.79 3.9e+03 -3.0 22.1 45 163 260 371 247 403 0.49

3 5 4 2e+04 -5.3 7.0 64 129 402 469 376 504 0.63

4 5 7.8e-08 0.00038 20.1 0.0 1 21 574 594 574 598 0.92

5 5 1e-70 5e-67 227.2 0.0 196 408 725 932 602 932 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.19	9.5e+02	-0.9	1.3	51	73	42	59	12	109	0.41
2	5	0.79	3.9e+03	-3.0	22.1	45	163	260	371	247	403	0.49
3	5	4	2e+04	-5.3	7.0	64	129	402	469	376	504	0.63
4	5	7.8e-08	0.00038	20.1	0.0	1	21	574	594	574	598	0.92
5	5	1e-70	5e-67	227.2	0.0	196	408	725	932	602	932	0.87

Sequence Information

Coding Sequence: ATGTCAGAGCATAACGGGCCCACGGAGGGCCCGGGCTGGTGGACACCAACTGCAGCACAATCATGGAAATCATCATcgtcaaataattcaattgcgtcatcatcaacaacaaacGCAAATAGCACAACCAAtacaaatatcattaataataataataataacaacaataataataataataataacaataacaatacaaataacaataatgcaTCAACATCAACGTCATTACGTAGTAGCGAAGCGGGAAAAAATGTTTCTGTAACGACAATAAATGTTCCACCATTGTCAGATATGCACgatggTAAAAGTGTGAAATATTTGGGCGGTCAAAATGGCGTAACTGTATCAGTAGTGTCATCATGTGGTAGCAGTCCAAGTCCTGGTCTCATGAGCCATGACACAAATTCCATTGATGATCTTGAAGATAGCGATGGTGAAGTGAGCAAAATTGATTTTCGTGGTGTTAATTTACGAACTAAAAAGAAACGCGATGGCGATATCAGTGAATCGTCTACATGTTTTGATgatattcatcatcaacagCCAGAGCGTCCAATGTCATGGGAGGGTGAATTATCAGATCAAGAAATGTCTTCCAATACAATTACAAATCAAGATCATGAAGAAACGTCAATGGAAGGTGTTCAAGTTTGTGGCGCAAGTCCGGGGCCACAAGAGcaaaaatttccaattaaaCCTGAGCCCGATTTTCGATCGAGTCCCACCGTGGGAATTAATTCACACGTTGACACAACAATACCAATTCATGCACAGCAACAATTGCAACAACAACATCAgcaacatcaacaacaacatcaccatcagcaacagcagcagcagcagcaacaacaacagcagcagcagcaacatcaACAAAGTCATCCACAGCAGCGTGAACTTGAGCAAAATCAACAAAGTGATTTGCCATTACTCGTTGGTAAACTCCTTGGCGGATACAATAATTCAACGCCCAATCACAGTCCCGTGTTAAATCCACGTCATCATTTGACAAAGCACAGTCATACAAGATCTCAAGTGCCGTCACCTGATTCTGCAATTCACTCAGCATACAGTGTATTTTCATCACCAACCCAGAGTCCACATGCTGCACGCCATTCAGCGCTTGGAGCTGGTAGTCCAgtaccatcatcatcactcTCACTATCACGTCACAGTTTCAACAATTCCACTTCGTCATTATCACTGTCACATTCATTATCGCGAAATAATTCAGACGCATCAAGCAGTTGTTACAGCTACGGTTCACTAAGTCCGCCCACACATTCGCCCGTACAACAACCACGTCACGCCCATCCTCAACATCATCACCAAGTACCGCAGGGTAGTCCTTTACACCTGCCAACAACGTCAACTAATAACGCCCACCATCATTATTCAAATGCATCAAATGAACTTGGCTCTGAGGGACACTCTGAAGACCCAGAGGATTGTAAAATTCCATCTGCACCACCGGGTATTTCAACGAGgcaacaattgataaatagcCCGTGTCCGATATGCGGTGACAAAATAAGCGGATTTCATTATGGAATATTTTCATGTGAATCGTGTAAAGGATTTTTTAAACGGACCGTTCAAAATCGTAAGAATTATGTTTGTTTAAGGGGCGCCGGTTGTCCAGTTACAGTTGCAACACGAAAAAAGTGTCCAGCTTGTCGTTTTGATAAGTGTTTAAATATGGGAATGAAATTAGAGGCAATTAGAGAGGACAGAACACGCGGTGGTAGAAGTACGTATCAATGTACGTATACATTACCGGCAAATCTTATTGGCAGTCCGGCTGGTAGTGTTGCCGGTGATAAAATGACTGGTGGTACATGTAGTCCTGCACCACCTGGCTCTGAACATCATCATTCTGCGCGTCATCATTGGAATCATAAAGTTCAAGTTGTACCGCAATTACTTCAAGACATTATGGATGTGGAACATCTTTGGCATTACAATGATAATGATCGTGTTAGTCAAGGTAGTAATGGACCTGTAAATATGGATCCGTGTGGTTTAGGTTTGAGCGGCGAGGGCAATAGTAATGGTAATGTTGATAGTAGAAGAGAATCATCCAGGCCTAATTCAACAGGTCCACCAGCAGCACCTAATCATGAACAATCATcaccaacaacaacaaatCCAACACCCGGAAATAATTCAACCACAAATCCAAATGGCAATTCATCGCAACAACCAGATTTTCTATCGAATTTGTGCAATATCGCTGATCATCGActatataaaattgtcaagTGGTGTAAGAGTTTaccattatttaaaaatatttcaattgacgatcaaatatgtttattaataaattcatggtgtgaattattattattttcatgctgTTTTCGTAGTATGAGTACACCAGGTGAAATACGTGTATCACTTGGTAAATCGATTACACTTGAACAAGCACGTCAACTTGGATTGGCAACGTGTATTGAGCGTATGCTtgcatttacaaataatttacgaCGATTACGCGTTGATCAGTATGAATATGTTGCAATGAAAGTTATTGTATTGTTGACATCAGACACAAGTGAATTAAAGGAGCCCGAAAAAGTTCGTGCATCACAGGAGAAAGCACTCCAAGCATTGCAACAATATACAATTGCTAGGTATCCAGAAATGCCAGCAAAATTcggtgaattattattacgaaTACCGGATTTACAGAGAACGTGTCAAGCGGGCAAAGAATTGCTCAGTCAAAAGCGCGCAGAAGGCGAAGGCAGCTCATTCAATCTTCTCATGGAACTTTTGCGTGGTGATCATTGA
Protein Sequence: MSEHNGPTEGPGWWTPTAAQSWKSSSSNNSIASSSTTNANSTTNTNIINNNNNNNNNNNNNNNNNTNNNNASTSTSLRSSEAGKNVSVTTINVPPLSDMHDGKSVKYLGGQNGVTVSVVSSCGSSPSPGLMSHDTNSIDDLEDSDGEVSKIDFRGVNLRTKKKRDGDISESSTCFDDIHHQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPTVGINSHVDTTIPIHAQQQLQQQHQQHQQQHHHQQQQQQQQQQQQQQQHQQSHPQQRELEQNQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHAHPQHHHQVPQGSPLHLPTTSTNNAHHHYSNASNELGSEGHSEDPEDCKIPSAPPGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGSVAGDKMTGGTCSPAPPGSEHHHSARHHWNHKVQVVPQLLQDIMDVEHLWHYNDNDRVSQGSNGPVNMDPCGLGLSGEGNSNGNVDSRRESSRPNSTGPPAAPNHEQSSPTTTNPTPGNNSTTNPNGNSSQQPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSQKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01002113;
90% Identity: iTF_01560519;
80% Identity: iTF_01001285;