Mbra000185.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microctonus brassicae
Gene Symbol
tfip11
Assembly
GCA_940306215.1
Location
OW675801.1:1226272-1230241[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-99 7.7e-96 321.0 16.0 1 275 378 645 378 645 0.98
2 2 0.025 1.3e+02 2.2 0.1 158 272 658 687 650 697 0.62

Sequence Information

Coding Sequence
atgtcaGAGGACGaagttgatgatttatttttcatgaatcgTCCACGACGAAAATTCACAAAAGAACAACAAATGcttgGCATTTGGGCTGATGACagcgatgatgatgaagaacaATCAGCAAAACCTTCAGCTCGAGGATTTTCTAAAAGACCAAAGAATTATACAGCGCCTGTGAATTTTGTTGCTGGAGGAATTCAACAATCAGGAAAAccaaaagaagataaaaaagatgaagatgacgataatgatggtgatgatatgATGAATGTACCAAATAGTTCAAgCGAATCGGATGAGGATGAtgtgaaaaatgttaaatcacGTCAGTCTTTTTCGACGCATATGGAAGGTGGAATCGCTGGTTTACGTCAAAAACGAGCGCCAATTAATCCTGCATTGATGAATACTGGTGTTGGTGGCTGGGAAGTGCACACCAAAGGAATTGGTGCAAAACTTTTGATTAAAatggGTTTTGAACCGGGAAAAGgtttaggaaaaaaattacaaggtATTAGTGCACCAGTTGAAGCACATTTACGTCGTGGTAGAGGTGCAATTGGTGCATATGGACCGGAAAAATtggcaaaaataaaagatgaagatgtaaaagaggaaaaagcatttaaagaaaaattgtctCATTGGCGTAAATCaacgattaataaaaataaaaaagaaattaaatatcaatatcgGAGTGTTGATGAAGTATTGGAAGACACAAAATCACGaccaaatattaaatcatcattGGGAAATAATTCTATGAGTAAAGTTAAAGTTATTGACATGACAGGACCGCAACAACGAGTTTTAAGTGGTTATCATGCAATTGCTGGTGGACAAAAACGTCCTGATGATTCTATAAATGACATTGATAAAAGATCATTGACTAATTTTTCTCTACCTGAATTGCAACATAATCTTAATTTAATTGTCGACATGTGcgaacaaaatattattcaaaacgATAGACGCACACGACATTTGAGCGATCGTGTTGTTGCATTGGATgcggaaaagaaaaatatgacaaAAATTGTCAGCCATCATGAAAAGTTAATTGATACATTAGAAAATGTTTTGactattgttgataaattaatgatgaaaaatgacGAAATGACATTGAAAGAAACTGCGGTAGCATTTCAAAAACTTCAAGATCAATattatgaagaatataaaatgtatgaatTGGGGGAATTGGCAAGCAGTTTTGTTGTACCAAAAGTTAAAGATTGTCTCGCTACGTGGAATCCACTTATTGATCCAAAACAACCAATTAGTATTATAAAAGAATGGAAAGATATACTTGAAGCTGGATTAAGTACATTACAAACACGAAATATGCTGCCTTATGATCAATTAATTTGGAATGCGTGGATGCCATCAATGCGCGGTGCAGTTCAagAATGGACTTGCAGACATCCAGAGccattaattgaattgattgaACATTGGATGCCATTGTTGCCTGCATGGATTCTCGATAATATATTGGACTTGCTTATATTACCAAAACTCACATTAGAAGTTGAAGAATGGAATCCATTGACTGATACAGTTCCAATACACACTTGGGTACATCCATGGCTGCCATTAAtgggtaGTCGAATggatacattaatttatccaataaTACGACGTAAATTGGGTTCAGCATTGGGTGGCTGGCATCCATCAGATAGATCAGCACGATTGATGTTAGAACCCTGGTCGCAAGTGTTTAGTAAAGGCGACATGGAAGCGTttttagttaaaaatatattacctaAATTACAAATAGCATTGTCAGAATTTGTTATAAATCCACATCAACAGCATTTAGACAATTGGAATTGGGTATTTGAATGGGTGACTTTGTTGCCGATACACACAATGGTTGGattattagataaatttttctttccaaaATGGCTTCAAGTTTTGGCATTTTGGTTAAATCATTCGCCGAATTATGATCAAATTACTCATTGGTATAtgggatggaaaaaaatgttgaacgATAGATTATTAGCTGAACCAATTATAaaagATCATTTTAAAAAGGCGTTGGATATGATGAATCGAGCAGTTTCAACGCCGCAAAGTCATCAACCTGGTGCAATGGAGCAAGTTTCATATTTAACAACATTAGAAAGAAGTCAACCATTGTCACAACAAATTCCAGCAGCGTCACAGCCGCGCATtgagAGATTGGCGGAAGCGATGCGTACAGCCTCGCAAATACCACAAGGCTTCAAGGATcttgtacaaaaaaaatgcGAGGAACGgggcattttatttatgccaATTCCAAATCGTTATAGAGAAGCAAAGCAAGTTTATAAAGTTGGCAATGTTCAAGCGTATATTGACggtaatgttttatttatttgtcacaATGGCGGAAATTGGGTACCAACGAATCTTAATTCGTTACTTGACATGGCTGAAATATCATAA
Protein Sequence
MSEDEVDDLFFMNRPRRKFTKEQQMLGIWADDSDDDEEQSAKPSARGFSKRPKNYTAPVNFVAGGIQQSGKPKEDKKDEDDDNDGDDMMNVPNSSSESDEDDVKNVKSRQSFSTHMEGGIAGLRQKRAPINPALMNTGVGGWEVHTKGIGAKLLIKMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIKDEDVKEEKAFKEKLSHWRKSTINKNKKEIKYQYRSVDEVLEDTKSRPNIKSSLGNNSMSKVKVIDMTGPQQRVLSGYHAIAGGQKRPDDSINDIDKRSLTNFSLPELQHNLNLIVDMCEQNIIQNDRRTRHLSDRVVALDAEKKNMTKIVSHHEKLIDTLENVLTIVDKLMMKNDEMTLKETAVAFQKLQDQYYEEYKMYELGELASSFVVPKVKDCLATWNPLIDPKQPISIIKEWKDILEAGLSTLQTRNMLPYDQLIWNAWMPSMRGAVQEWTCRHPEPLIELIEHWMPLLPAWILDNILDLLILPKLTLEVEEWNPLTDTVPIHTWVHPWLPLMGSRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLEPWSQVFSKGDMEAFLVKNILPKLQIALSEFVINPHQQHLDNWNWVFEWVTLLPIHTMVGLLDKFFFPKWLQVLAFWLNHSPNYDQITHWYMGWKKMLNDRLLAEPIIKDHFKKALDMMNRAVSTPQSHQPGAMEQVSYLTTLERSQPLSQQIPAASQPRIERLAEAMRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFICHNGGNWVPTNLNSLLDMAEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01002071;
90% Identity
iTF_00997033;
80% Identity
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