Mcol001832.1
Basic Information
- Insect
- Meteorus colon
- Gene Symbol
- tfip11
- Assembly
- GCA_030523125.1
- Location
- JAPYZG010000134.1:29230-32934[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-100 1.4e-96 323.2 16.7 1 275 377 644 377 644 0.98 2 2 0.0089 78 2.7 0.1 158 272 657 686 649 696 0.62
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAAGATGATTCGTTTTTCCAAAACCGTCCAAGACGAAAATTTACCAAAGAACAGCAAATGCTTGGTATGTGGGCGGATGATagtgatgacgatgaagaagTTCCTGCTCAACGATCACGAGGATTCACTAAACGGCCGAAAAACTATACAGCGCCAGTTAATTTTGTTGCTGGTGGTATTCAACAATCAGGAAAATCAAAAGAGGAGAAGaaggatgatgatgaagacgatgatgagaatgaagcTTTGGATGTACCGAATAGTTCCAGtGAGTCCGAAAGTGAAGATACAAGAAAAGTTAAATCTCGGCCATCATTTTCGATGAACATGGAAGGAGGAATAGCTGGTCTCCGCCAAAAACGTGCGCCTATTAATCCCGCACTTATGAAAACTGGTGTTGGTAGTTGGGAAGTGCACACGAAAGGGATTGGTGCGAAACTTTTGATCAAGATGGGATTTGAACCAGGGAAAGGtctaggaaaaaaattacaggGTATCAGTGCACCTGTAGAAGCACATCTGCGACGCGGTAGAGGTGCTATTGGTGCGTATGGGCCAGAAAAAGTAGCGAAAGTAATTGATGAAGAtgtcaaagaagaaaaagcattcaaagaaaaattatcgcACTGGCGCAAATCTACAAGTAATACTCggaataagaaagaaataaaatatcagtATCGGAGCGTTGATGAGGTATTGGAAGATACGAAATCACGACCGAATGTCAGAGCATCATTCGGTAATGATGCCATGAGTAGAGTAAAAGTTATCGATATGACGGGCCCACAGCAAAGGGTTTTAAGTGGCTATCATGCAATTGCCGGTGGACAGAAACGCCCCGATGAGTCCATAGCCGATACTGATAAAAGATCTCTTACAAACTTCTCTCTGCCCGAATTACAACACAATcttaatttaattgttgacATGTGCGAACAGAATATTGTTCAGAATGATAGACGAACACGACACTTGAGCGATCGTGTTGTTGCATTGGAtgcagagaagaaaaatatttcgaaaattgTCAGTCATCATGAGAAACTTATCGATACATTGGAAAGTGTTCTgacaattgttgaaaaattgatgctgAAGAACGATGAAATGACACTGAGAGAAACAGCAGAGGCTTTCAGAAAATTGCAAGATCAATATTATGAGGAGTATAAGATGTATGAATTGAGTGAACTAGCTAGCAGTTTTGTTGTCCCGAAAGTGAAAGATTGTCTTGCTACATGGAATCCACTAATTGATCCGAAACAACCGATCAGTATTATGAAAGAATGGAAGGATATCTTAGAAATTGGTTTGAGTACTTTGCAGTCACGGAATATGCAGCCATATGATCAACTCATTTGGAATGCATGGATGCCATCGATGCGTGGCGCAGTTCAagaATGGGTATGCAGACAACCCGACCCATTGATTGATTTAATCGAAAATTGGATGCCATTGCTGCCTGCATGGATTTTGGACAATATATTGGATTTACTTGTGTTGCCAAAGCTCACGCTTGAAGTGGAAGAGTGGAATCCACTGACTGACACAGTTCCTATACACACATGGGTACATCCGTGGTTGCCGTTGATGGGCAGTCGCATGGATACATTAATATATCCAATAATACGCCGTAAATTAGGATCTGCGTTGGGTGGTTGGCATCCGTCAGACCGATCCGCACGACTGATGTTGGAACCTTGGTCTCAAGTTTTTACTAAAGGCGACATGGAAGCATttttagtgaaaaatattctaccGAAATTACAAATAGCATTATCcgaattcatcatcaatccACACCAACAGCATTTGGATCATTGGAATTGGGTTTTTGAATGGGCAACATTATTGCCGATACATACAATGGTCGGACtattagataaatttttcttcccaaAATGGCTCCAAGTATTGGCGCTTTGGCTAAATCATTCGCCGAATTATGATCAAATCACTCATTGGTATAtgggatggaaaaaaatgttgaacgaCAGGCTGTTGGCTGAACCAATAATAAAAGAACACTTCAAAAAGGCGTTAGATATGATGAATCGTGCTGTATCAACGCCGCAAAGTCATCAACCCGGTGCTATGGAACAAGTTTCATATTTGACGACTTTGGAACGAAGTCAACCGCTATCCCATCAAATTCCAGCGTCATCGCAGCCACGCATTGAGAGACTCGCTGAAGCGATGCGCACGGCCTCGCAGATTCCACAAGGCTTCAAAGATCTCGTGCAAAAGAAATGTGAGGAACGTGGCATTCTGTTTATGCCAATCCCGAATCGTTACAGGGAAGCAAAACAAGTTTACAAAGTTGGCAATGTTCAAGCTTATATCGATGGAAATGTTCTATTCATTTGTCACAATGGTGGTAATTGGATCCCAACAAACCTTAATTCATTACTTGACACAGCtgaaatatcatga
- Protein Sequence
- MSDDEDDSFFQNRPRRKFTKEQQMLGMWADDSDDDEEVPAQRSRGFTKRPKNYTAPVNFVAGGIQQSGKSKEEKKDDDEDDDENEALDVPNSSSESESEDTRKVKSRPSFSMNMEGGIAGLRQKRAPINPALMKTGVGSWEVHTKGIGAKLLIKMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKVAKVIDEDVKEEKAFKEKLSHWRKSTSNTRNKKEIKYQYRSVDEVLEDTKSRPNVRASFGNDAMSRVKVIDMTGPQQRVLSGYHAIAGGQKRPDESIADTDKRSLTNFSLPELQHNLNLIVDMCEQNIVQNDRRTRHLSDRVVALDAEKKNISKIVSHHEKLIDTLESVLTIVEKLMLKNDEMTLRETAEAFRKLQDQYYEEYKMYELSELASSFVVPKVKDCLATWNPLIDPKQPISIMKEWKDILEIGLSTLQSRNMQPYDQLIWNAWMPSMRGAVQEWVCRQPDPLIDLIENWMPLLPAWILDNILDLLVLPKLTLEVEEWNPLTDTVPIHTWVHPWLPLMGSRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLEPWSQVFTKGDMEAFLVKNILPKLQIALSEFIINPHQQHLDHWNWVFEWATLLPIHTMVGLLDKFFFPKWLQVLALWLNHSPNYDQITHWYMGWKKMLNDRLLAEPIIKEHFKKALDMMNRAVSTPQSHQPGAMEQVSYLTTLERSQPLSHQIPASSQPRIERLAEAMRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFICHNGGNWIPTNLNSLLDTAEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01002071;
- 90% Identity
- iTF_01560429; iTF_00996339; iTF_00451933; iTF_01000543; iTF_01001254; iTF_01002071;
- 80% Identity
- -