Mpol007836.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- lola
- Assembly
- GCA_949715475.1
- Location
- OX454415.1:164030715-164032800[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-11 1.6e-08 35.2 0.0 4 43 365 404 362 406 0.91 2 2 1.3 1.6e+03 0.1 1.0 4 20 499 514 498 514 0.90
Sequence Information
- Coding Sequence
- ATGGGCAATACGGACACACAAACCTACTGCCTGCGATGGAACAATCACAAATCCAATTTGGTCGAAATTCTCGACGCACTCATCAAAATGGAGAGCTATGTCGACTGCACCCTAATCGTCGAGgatcaaattcaattcaaagcCCATCGTGTCGTGCTAGCGGCCAATTCGCTGTTTTTCCAAAGCATTTTGCAAGACTTCCCCATGGACGATTGTAGTATCATCATTCCCGAAGTTCAGGCATTTGAAATGCGTGCCTTATTGGAATACATGTACACGGGTGAGGTGAACGTGACGCAAAgtcaaattccaaaaattatggaaattgCCGAAAAGCTGGGCGTAAAAGGTCTCTTTGATATGACCGATTTCAAAGAGAAGTTCAACAAAACCGATAAGACCCGATCTAAGACGCCCGTTTCGCAAGGACCATCGAGCATGCCACCGAAAAAGGAAATTGGCGGCGAACATTTGCCTTCGTCGCCGCAAATCAGCACTTCAACAACCGTCGCCACGGCACAAAGTTGCACTTCATCCCCGCCGTACAATTTCAAACCATCGTATTCGAATATGTATGCAAAAAGTGCCGCCGATCCGTCAACATCGGAACGACCCAATTCAGTGCCATGGCCCATTTCGTCTCACCTGTCGGCCGCAATTCCGAGTGCTGCAGCCGCGGCTGCGGCAATGTTGAGCTCTGTCTATGAATCTGGTCCGGATATGAACCCGTTGAAACGAAAAAAGATCTCCTCCATGTCGAATATGTTGATGACACGCGATACACCAATTTTGAGAAATGTCCTTGCCCAGACCCATGCTGCCGACTCGTCCCAACCTATGCCACTTGTGTGTCAGCCAGTCAAGCAGGAAAGTCGCGTGGAAAAGATCGCGGAAAATTGCAATGGATCAGAGTACAATGATAAGAAATACAAATACGATTCACCCGAGCCCCATTCACCCTACGGCGATAAGTCCTTTGACGATGACATGGACATGTCGCCCAACTATGCCAACGATTCTCGTCTCGCCTCCTACGTTCCGCAACAGCAACAGAAACCCGAATGGAAGCGTTACAAACAGTATACACGAAGCGATATCCTTTCGGCCATCGATTGTGTACGCAATGGAATGAGTGCTTTGCAGGCATCGCGCAAATTCGGTGTTCCATCGCGTACGCTCTACGATAAGGTGAAAAAGCTTGGCATTACAACCGCTCGACCGATGAACCGAACGATGAAGCGTAGCCCGAGCAGTGGCGGAGCCCAGGGTGGCTTCCCGTTCGGACTGGGTGGCGGTCACCCGTATGGCAGTGCCAACGAACAAATTCTTCAACAGTTGCACGAGAATAGCGAACGTGAAAAGGAACAACGCGAACATCAATTGCCACCCACCATTCCACATCGGGCAGCCGCTCTTTTGGATCCCGTCTTTTTGCAACAGGCGTTTGAATCGCGTGGCGGCGAGATAGCCGGTCGTGACGCCCTACATGCCATGGCGCTGGCTGCGGCGGCACATGCTGCCGCCAACGGTATTTCAACGAGTCCTGGTACAAATGGCACGGCACGATCGCCTAGCCCGATTAAATATTCGTCCGTTCGATCGCATAGCCCGGTGAGTATGCGTGATCGTGAGCGGGAACAGGAGCGTGAACGGGAACGTGAACGGGAACGCGAACGTGAACTTGAAAGCGATCGTGACTATCAGCGACACGCGGCCGACGACGATGACGAAGATCAAGTCGAAGATCTGTCGGTTGGAGCCCGAAAAGAAGATCCACGAGCATCGCCACATTCACGTTCCAGTCCAATTTCGCATGCCTATCAGCTACAGCAGGAACAACGCCATCAACAAATTCTCCAGCATCATCATCTGCAGCAACAAACCGGTGTCATCGTACCGCCTATGACCACCAAGGTGTCGTCAAACGGTGGTGCCGGTGAAGATTACTCGTACGAAATGAAACGATCCGTTTCGCCCGCGGAGGAATCAGCAATCTCCGCAAGGGAGTAG
- Protein Sequence
- MGNTDTQTYCLRWNNHKSNLVEILDALIKMESYVDCTLIVEDQIQFKAHRVVLAANSLFFQSILQDFPMDDCSIIIPEVQAFEMRALLEYMYTGEVNVTQSQIPKIMEIAEKLGVKGLFDMTDFKEKFNKTDKTRSKTPVSQGPSSMPPKKEIGGEHLPSSPQISTSTTVATAQSCTSSPPYNFKPSYSNMYAKSAADPSTSERPNSVPWPISSHLSAAIPSAAAAAAAMLSSVYESGPDMNPLKRKKISSMSNMLMTRDTPILRNVLAQTHAADSSQPMPLVCQPVKQESRVEKIAENCNGSEYNDKKYKYDSPEPHSPYGDKSFDDDMDMSPNYANDSRLASYVPQQQQKPEWKRYKQYTRSDILSAIDCVRNGMSALQASRKFGVPSRTLYDKVKKLGITTARPMNRTMKRSPSSGGAQGGFPFGLGGGHPYGSANEQILQQLHENSEREKEQREHQLPPTIPHRAAALLDPVFLQQAFESRGGEIAGRDALHAMALAAAAHAAANGISTSPGTNGTARSPSPIKYSSVRSHSPVSMRDREREQERERERERERERELESDRDYQRHAADDDDEDQVEDLSVGARKEDPRASPHSRSSPISHAYQLQQEQRHQQILQHHHLQQQTGVIVPPMTTKVSSNGGAGEDYSYEMKRSVSPAEESAISARE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00322350;
- 90% Identity
- iTF_00999755;
- 80% Identity
- iTF_00999755;