Marg034245.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- grn
- Assembly
- GCA_963576795.1
- Location
- OY756211.1:111238143-111287696[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-20 3.8e-16 59.5 4.7 1 35 37 70 37 71 0.98 2 2 2.7e-19 1.3e-15 57.8 6.3 1 35 97 130 97 131 0.97
Sequence Information
- Coding Sequence
- ATGTTGCAAGTTGCACATCCTATTGAAACCAAACATCGTTCACATCAATATCATGAAGAGCGAGAACAAAGAAAAATCAGTTATCATGGTGCGATAGAAGGACGTGAGTGTGTAAATTGTGGTGCCACCTCAACGCCTTTATGGCGACGTGATGGTACTGGTCACTATTTGTGCAATGCCTGCGGTTTGTATTATAAAATGAATGGACAAAATCGACCACTAATTAAGCCAAAACGAAGACTGacATTACAGTCATTACAAAGTGCCGCCAAAAGAGCGGGGACATCGTGTGCCAATTGCAAAACCACAACTACAACCCTTTGGCGACGTAATGCTAGCGGTGAACCAGTATGTAATGCCTGTGGTCTCTACTATAAATTGCACAATgTTAACCGGcctttaactatgaaaaaagaAGGTATACAAACCCGTAATCGCAAATTATCATCAAaatcgaaaaagaaaaaaggtttAGGCGGTGGTTGCCTACCTATTGGTGGCCACTTAGGCATGGGCGATTTTAAGCCTTTAGATCCTTCAAAGGGTTTTGGAGGTGGTTTTTCGGCTTCTATGGCTCAACATGGCCATCTTTCCAGTGGTCTACATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACGAGTGGCATGGGAGCTTTAGGTGCTTCCAGTGGTTTACAGGGTGGCTTTTCAACGGCCGGTTCATTAAGTGGCGGTGTTGTACCTCATTCTCAGCCTTATCATTTGGGTTTGGGTTCAATGGTAAGTAACTGA
- Protein Sequence
- MLQVAHPIETKHRSHQYHEEREQRKISYHGAIEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTSGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMVSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00331996; iTF_00536425; iTF_00553421; iTF_01400025; iTF_01550650;
- 80% Identity
- -