Zcam005543.1
Basic Information
- Insect
- Zaprionus camerounensis
- Gene Symbol
- grn
- Assembly
- GCA_018904165.1
- Location
- JAEIFS010000741.1:11228334-11261293[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-20 1.7e-16 59.4 4.7 1 35 28 61 28 62 0.98 2 3 2.2e-19 6e-16 57.6 6.3 1 35 88 121 88 122 0.97 3 3 5.5 1.5e+04 -4.4 1.5 7 10 255 258 253 263 0.47
Sequence Information
- Coding Sequence
- ATGAGGCAGGTGAAAAGTATCCTGGCCTGGCCTGGCCTGGCCTGGCTTGGCCTGCTCGAGGGTCGCTCAGAGGGACGCGAGTGCGTGAATTGCGGCGCCACCTCAACGCCGCTGTGGCGACGCGACGGCACTGGACACTATCTGTGCAACGCCTGTGGCCTTTACTACAAAATGAACGGACAGAATCGACCGCTGATCAAGCCAAAGCGAAGACTGACACTGCAGTCGCTGCAGAGCGCAGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCCAGCGGCGAGCCCGTTTGCAATGCCTGCGGATTATACTACAAGCTGCACAATGTCAATCGTCCACTCACCATGAAGAAGGAGGGCATACAGACGCGTAATCGCAAGCTCAGCTCCAAGTCAAAGAAGAAAAAGGGTCTGGGCGGCGGCTGTCTGCCAATTGGCGGACATCTTGGCATGGGCGATTTCAAGCCACTCGATCCATCCAAGGGCTTTGGCGGCGGCTTCTCGGCATCAATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCACATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCACTGGGTGCCTCCGGTGGACTGCAGGGTGGCTTCTCCACGGCGGGCTCGCTCGGTGGCGGCGTTGTGCCCCACTCGCAGCCCTATCACTTGGGCCTCAGCTCGATGCCATTGGACGACTCCGCCACCAAGACGACCAAGACGACGACGACGATGCGGTTGATTTCGAGCTTATCACGTTCACAGGAGACTCGCAGACGCTAA
- Protein Sequence
- MRQVKSILAWPGLAWLGLLEGRSEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMPLDDSATKTTKTTTTMRLISSLSRSQETRRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557556; iTF_00584088; iTF_00331996; iTF_00618816;
- 90% Identity
- iTF_00998212;
- 80% Identity
- iTF_00584088;