Dlow005170.1
Basic Information
- Insect
- Drosophila lowei
- Gene Symbol
- grn
- Assembly
- GCA_008121275.1
- Location
- CM017777.1:33985255-33999707[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-20 1.6e-16 59.5 4.7 1 35 35 68 35 69 0.98 2 2 1.7e-19 5.5e-16 57.7 6.3 1 35 95 128 95 129 0.97
Sequence Information
- Coding Sequence
- ATGTTTGGCATGCCAGAGGACAGGacggaccaggaccaggacagTGCAGGACGGGACAGGACACGTgtgacaacagcagcagctaaatCACAGGGTCGCGAGTGCGTGAACTGTGGCGCCACATCGACGCCACTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTATACTACAAGATGAACGGCCAGAATCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTGCAGTCGCTGCAGAGTGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAgaccacaaccacaaccctTTGGCGGCGCAACGCCAGCGGCGAGCCCGTCTGCAACGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTCACCATGAAGAAGGAGGGCATACAGACGCGTAACCGCAAGCTGAGCTCCAAgtccaagaagaagaagggtCTGGGCGGCGGCTGTCTGCCGATGGGCGGCCATCTGGGCATGGGCGATTTCAAGCCTCTGGACCCCTCGAAGGGCTTCGGCGGCGGCTTCTCTGCCTCCATGGcGCAACATGGACACCTTTCGAGTGGATTGCATCCGGCGCATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGGGCCTTGGGGGCTTCTAGTGGGCTGCAAGGAGGCTTCTCCACCGCTGGTTCTCTGGGCGGCGGTGTTGTGCCGCACTCGCAGCCCTATCACTTGGGACTCAGCTCAATGGGCACCTGGCGCACAGACTATACGTGA
- Protein Sequence
- MFGMPEDRTDQDQDSAGRDRTRVTTAAAKSQGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547721; iTF_00553421;
- 90% Identity
- iTF_00998212;
- 80% Identity
- iTF_00557556;