Mvio007876.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- ken
- Assembly
- GCA_030762175.1
- Location
- CM060832.1:6401344-6417763[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0044 3.4 9.7 0.4 25 46 190 211 182 214 0.86 2 8 0.039 30 6.6 0.0 21 48 328 355 324 358 0.90 3 8 0.0069 5.3 9.0 0.0 21 45 734 758 730 763 0.89 4 8 0.61 4.7e+02 2.8 0.0 20 43 846 869 840 874 0.86 5 8 0.062 47 6.0 0.1 21 43 875 897 870 907 0.91 6 8 0.029 22 7.0 0.0 21 48 1124 1151 1114 1154 0.87 7 8 2.6 2e+03 0.8 0.0 21 52 1237 1268 1233 1270 0.82 8 8 0.18 1.4e+02 4.5 0.4 20 47 1264 1291 1256 1296 0.82
Sequence Information
- Coding Sequence
- ATGTTAGACGCCGAAGAACACCCCTCTCCCAAGTCTAAGGAGTTCAAGTTTCTCACCTATTTAGATCTGTGTGGCCAATCTGAAGCGGAGCAAGGAGGGAACATTCTGTTTGTCTGTGCATTTTGTGAAGAGGCATATGAAAATGAGCAGCAGTTGGAGACGCACATATATGAGGTACACCTAAAGGATGAAAATGGTTCAGAAAGCGGTGAATGTAAAAGTGTCAGGAGTGAGCGTAAGATAAAGAGAGATAGAAAACGTTTGGAGGAAGAATGCATATCATGTCGAAAATGTGGCATAAGCTTTGAATCCAGAGAAGAGTTGACGCTTCACGTCTCAGACTGCGAAATGGGAAGACAGTTCCAATGTATTCATTGCAACATGCAATTTGAAACATTTCCTGAAATGCAAGACCATGCACTTATCCATAACAACAAACCACACTTTGAGTGCAAATATTGTGAAGCAAAATTCTCAACTGCTAAGAGACTTTATAAACACTTTCTAAGTCACCAGAGTGGTTCCGCTGAACATGTGGAAGAGATTGAGAGGTGCACAGACAAAGCTCAGTGCTGTTATATGTGtggcaaatattttaaacaaactcGAAACTTGAGACAGCATCTGAAAGTTCATGAAAATGATGCCTATCTGACCTGTGAGAGATGTGGCAAACGATACAGGCGCGCTGCAAATTTTAAGGCTCATGAACGCTGGCACATGGGAGTAAAGCCGTTCGTGTGTGACAAGTGTGGCAAGAGTTTTTACAGTTTACAAAACTTGAGCAGTCACATGCCGGTGCATTCGGATGATCGTCCCTTTCTCTGCTCACATTGTCCAATGGCTTTCCGCTGGCGACACGTGTTGAACAACCACATGAAAACTCACAAGAATTCTGATTCTTTGTTATTTCAGTGCCTAGTGTGCAAAAGGAAGCTAACAACCAAATCATCGTTGACGCAACATTTGATGACCCACACTGGGGAGAAACCGTACTCTTGCAACATCTGCACCGAGACTTATCGGCAAAAGAAGAGCCTGGACTTTCATATGAAGCAAGCACATGAAGGTACCTCTTTCTTCAAGTGTAATGCTTGCAAGAAACAATTTTTGTCTGAGGAAGAATATAATAACCACATTGAAGAAGGGGAGTGCTTCAGTGATCAGCCACCTGAGCAGAAAGTGTGTAAAAAAAGTAGTTATTGTTGTGATGTGTGTGGTAAGACATTTGCCTTGAAAGTTAGACTCGCCCTTCACCGAACAGTTCACACGGGGGAGCGTCCGTACAAATGTGACAAGTGCGAAAAGACGTATAGATTAACAAGTAGTTTACATTACCACAAACAGAGCGCTCATGGCGTTCGTTTGTTTACTTGCAGTGTATGCTGCAAGAGTTTCCGCTCTAACGTGGCTCTCAGCGTCCACAAGAAAATACATCTAAATATACGTCCGTATGAATGTGTGTTCTGCCACAGATGCTTTTTGAGGAAACCTTACCTCCAGAATCACATTCGACTTCATACAGGGGAAAAACCTTACGTTTGTGACGTATGCGGGCAGGCTTTTGTTCAGAATGGGTCGTTATTCCTGCATAAGAAAAGTCATGCTAAGTCCCTCACAACTTACAGAGCTTTCCTGGAGGCAAATAACAGTTTATCCAACTTGAACAAGAAGAAGGATGCAACAGTACTGTCTACTTTCAGATCCTACCTGGAGGCTACAAACAATTTGCCCAACTCAATCAAGAAATGCGACGAAATTTCTCTAAACTCTGCATGGGTTAAAGGTGACGCAAGTGCTCAAATTTTATGGAGGTGTAGCAGATGTGAAAAATCATTCCCCACGAATCAAGATATGCAAACGCACCTGTTAAATGTGCACAAAGAATGCAGTGCAGCCTGTAAAAGTGACAGTAAAATATCTCTAACTTCAGACCAAAAATGTGACACTTTCAGTTGCGAGGATTGTGGGAAAAAGTTTGCTAGGAGCTTTGAGTTGAAAAGGCACAGTAGATGTCACGTAATGCAAGTTGAAACAGACGGAAATGAGAACTGTGACAGTGAAAGTCTAGACTATGAGCATGAAGCTGATGCAAGTTCCACAAAGAAACGCGCGAAGTCATTTTTGTTTAACTGTATCCACTGCAGAAGGCGCTTTCACCTAAAGGATAATTATATACGCCACTTGCGAATACACACTGGCGAGAGACCTTTCACGTGTCACATATGTGGGAAGCAGTTCAGAGACTCGGGCGGGCTAGCGAGGCATATAAAGGGTGTTCATGCGGGTATTAAAAAATTTGACTGTGATCTTTGTGGGCGCAGCTTTGCATCCAAGGAGACCAAAGAAGATCATCGCCGTATACACACTGGAGAGCGTCCATATGTATGTGAATCTTGTGGGAAAACCTTCAGAGCAAAGGCGTCTTTGTACATCCATAGTAAAATACATACAAACTCCTTTCCACATCACTGTACGTACTGCGAAAAACGCTTCAGACGGCGACAAGAACTTCTGGCTCATGTCTCAACACATACAGGTGAAAAACCTCATGTTTGCGATATATGTACCAAGAGATTTCGTGTAAAAGGTGAGCTTATGAGACACAAACTGGTGCATTCTAGTGACAAACCTCACGTGTGTTCACTTTGCGGTCTGTCTTTTCGACAAAAGAGGTACTTAAAGAACCATGAAAAGGCTATTAGAACGCAAGACAAGGCAAAAGCCGGAGAGGATGAAATCACTGGTGACGTACCTGAACAGgactttgttcaagaacaggcattggagcttccagcaagattcatcTCCAGCCCACAAGGAAAGGTGCACCCAGAACTTGGCTATAGAGAAATGTTCCAGGTTGTGCTAGTTATCAAGTTTGGCCTTCTAGCAGTTCCGAACTGTGGCCAGTGCTTCCGGCCAGCAAGAGACTTACCCAGCAAAACTTTGTCTTGCAGGTTTCGACAGCCTCTCAATGAAAAGACAGTGCATTCAGAATCTTGCACTGAAGTGATGAAGGAGGTGGGCAGGCAATTGCAGAGTGGAGGAATCAAAGGCAGTTCTGTGCGTAGTAATTCTAGTGCTAGGAGAAAAACTGGCGAAAGGACGTTAAAAGGGAAGCGGAGACCAAGTAAAAAAGTGAAAGAGGAATTGCAAGAGCCACCTACTGTCGCGCAGAACTTGGAGTGTAAACAGGAACCAAAGGAGGAGTATGAAGAAACTGAAGTGTGGTACGGACTGACAAATGAGGATAGTGATTTAGAGTTGAAAGCAGAGTTTGAAGACAGAAGGGGCTACCAGTGTAACTTGTGTGGCAAAACGCTCGCTGTGAAGGAAAATCTCAAAGTACATATGCGCATTCACAGTGGCGAGAAACCCTTCACGTGTCACGTGTGTGGTAAACAGTTTCGGTGGGCGGCGGGTCTGGCCCGGCACTTGAAGGAGGTTCACGCGGGTATCAAAGAGCACGCTTGTGATATTTGTGGGCGAATGTTTGCTGCCAAGGCAACTCGTGATGGTCACCGTCGCACCCACACCGGTGAACGACCCTACGTCTGCGATTCTTGTGGCAAGGCATTCAAGACTCAGGCAACGCTGTACATTCATGGCAAAATACACTCGGACCTGTACCCTTTCTCGTGCACGCAATGTGGCAAGAAGTTCCGTCGGCACCAGGACCTGCTTAATCACGTTACTACACACACTGGCGAGAAACCGCACGTCTGTGATGTTTGTGGTAAAGGCTTTGGTGTGAAGAACGACATGAGACGCCATAGACGTATTCATTCGGACGAAAAACCCTACGTTTGTGCAATTTGCGGGCTGCGTTTCGCACAAAAACGATATCTTAAAAATCATGACAAAAGCCACCACAAAAAAGGTAATGTGGCATAA
- Protein Sequence
- MLDAEEHPSPKSKEFKFLTYLDLCGQSEAEQGGNILFVCAFCEEAYENEQQLETHIYEVHLKDENGSESGECKSVRSERKIKRDRKRLEEECISCRKCGISFESREELTLHVSDCEMGRQFQCIHCNMQFETFPEMQDHALIHNNKPHFECKYCEAKFSTAKRLYKHFLSHQSGSAEHVEEIERCTDKAQCCYMCGKYFKQTRNLRQHLKVHENDAYLTCERCGKRYRRAANFKAHERWHMGVKPFVCDKCGKSFYSLQNLSSHMPVHSDDRPFLCSHCPMAFRWRHVLNNHMKTHKNSDSLLFQCLVCKRKLTTKSSLTQHLMTHTGEKPYSCNICTETYRQKKSLDFHMKQAHEGTSFFKCNACKKQFLSEEEYNNHIEEGECFSDQPPEQKVCKKSSYCCDVCGKTFALKVRLALHRTVHTGERPYKCDKCEKTYRLTSSLHYHKQSAHGVRLFTCSVCCKSFRSNVALSVHKKIHLNIRPYECVFCHRCFLRKPYLQNHIRLHTGEKPYVCDVCGQAFVQNGSLFLHKKSHAKSLTTYRAFLEANNSLSNLNKKKDATVLSTFRSYLEATNNLPNSIKKCDEISLNSAWVKGDASAQILWRCSRCEKSFPTNQDMQTHLLNVHKECSAACKSDSKISLTSDQKCDTFSCEDCGKKFARSFELKRHSRCHVMQVETDGNENCDSESLDYEHEADASSTKKRAKSFLFNCIHCRRRFHLKDNYIRHLRIHTGERPFTCHICGKQFRDSGGLARHIKGVHAGIKKFDCDLCGRSFASKETKEDHRRIHTGERPYVCESCGKTFRAKASLYIHSKIHTNSFPHHCTYCEKRFRRRQELLAHVSTHTGEKPHVCDICTKRFRVKGELMRHKLVHSSDKPHVCSLCGLSFRQKRYLKNHEKAIRTQDKAKAGEDEITGDVPEQDFVQEQALELPARFISSPQGKVHPELGYREMFQVVLVIKFGLLAVPNCGQCFRPARDLPSKTLSCRFRQPLNEKTVHSESCTEVMKEVGRQLQSGGIKGSSVRSNSSARRKTGERTLKGKRRPSKKVKEELQEPPTVAQNLECKQEPKEEYEETEVWYGLTNEDSDLELKAEFEDRRGYQCNLCGKTLAVKENLKVHMRIHSGEKPFTCHVCGKQFRWAAGLARHLKEVHAGIKEHACDICGRMFAAKATRDGHRRTHTGERPYVCDSCGKAFKTQATLYIHGKIHSDLYPFSCTQCGKKFRRHQDLLNHVTTHTGEKPHVCDVCGKGFGVKNDMRRHRRIHSDEKPYVCAICGLRFAQKRYLKNHDKSHHKKGNVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995427;
- 90% Identity
- iTF_00995427;
- 80% Identity
- iTF_00995427;