Mvio007876.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- ken
- Assembly
- GCA_030762175.1
- Location
- CM060832.1:6401344-6417763[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 0.071 8.6 8.8 0.1 1 23 37 60 37 60 0.93 2 32 0.01 1.3 11.4 0.1 2 20 94 112 93 113 0.93 3 32 2.2 2.7e+02 4.1 0.6 1 23 121 143 121 143 0.95 4 32 0.0068 0.82 12.0 2.4 1 23 149 171 149 171 0.97 5 32 0.00056 0.068 15.4 4.4 3 23 192 212 190 212 0.94 6 32 4.7e-05 0.0057 18.8 0.6 2 23 219 240 218 240 0.96 7 32 4.3e-05 0.0052 18.9 0.5 1 20 246 265 246 268 0.93 8 32 0.045 5.5 9.4 3.6 1 23 274 296 274 296 0.95 9 32 8.9e-05 0.011 17.9 2.2 1 23 304 326 304 326 0.99 10 32 0.013 1.5 11.2 1.6 1 23 332 355 332 355 0.95 11 32 0.87 1.1e+02 5.4 0.3 1 20 361 380 361 382 0.94 12 32 0.0035 0.43 12.9 0.9 1 23 401 423 401 423 0.96 13 32 0.017 2 10.8 4.2 1 23 429 452 429 452 0.97 14 32 0.0096 1.2 11.5 2.6 1 23 457 479 457 479 0.98 15 32 0.02 2.4 10.5 5.3 1 23 485 507 485 507 0.98 16 32 5.5e-05 0.0067 18.6 0.2 1 23 513 535 513 535 0.98 17 32 0.0016 0.19 14.0 0.5 2 23 605 627 604 627 0.94 18 32 0.00015 0.018 17.2 4.2 1 21 651 671 651 673 0.94 19 32 0.44 54 6.3 6.0 1 23 710 732 710 732 0.94 20 32 1.2e-06 0.00015 23.8 0.4 1 23 738 761 738 761 0.96 21 32 0.00042 0.051 15.8 0.5 1 23 767 789 767 789 0.97 22 32 0.00039 0.048 15.9 0.3 1 23 795 817 795 817 0.97 23 32 0.0006 0.073 15.3 5.3 1 23 823 845 823 845 0.97 24 32 8.5e-05 0.01 18.0 1.3 1 23 851 873 851 873 0.97 25 32 0.00037 0.045 16.0 1.0 1 20 879 898 879 900 0.93 26 32 1.2e-06 0.00015 23.8 0.2 1 23 1100 1122 1100 1122 0.99 27 32 0.00073 0.089 15.1 0.3 1 23 1128 1151 1128 1151 0.96 28 32 0.052 6.4 9.2 0.4 1 23 1157 1179 1157 1179 0.95 29 32 5.7e-05 0.0069 18.6 0.2 1 23 1185 1207 1185 1207 0.97 30 32 9.2e-05 0.011 17.9 4.0 1 23 1213 1235 1213 1235 0.98 31 32 0.00011 0.014 17.6 0.7 1 23 1241 1263 1241 1263 0.97 32 32 0.0015 0.18 14.1 1.6 1 23 1269 1291 1269 1292 0.91
Sequence Information
- Coding Sequence
- ATGTTAGACGCCGAAGAACACCCCTCTCCCAAGTCTAAGGAGTTCAAGTTTCTCACCTATTTAGATCTGTGTGGCCAATCTGAAGCGGAGCAAGGAGGGAACATTCTGTTTGTCTGTGCATTTTGTGAAGAGGCATATGAAAATGAGCAGCAGTTGGAGACGCACATATATGAGGTACACCTAAAGGATGAAAATGGTTCAGAAAGCGGTGAATGTAAAAGTGTCAGGAGTGAGCGTAAGATAAAGAGAGATAGAAAACGTTTGGAGGAAGAATGCATATCATGTCGAAAATGTGGCATAAGCTTTGAATCCAGAGAAGAGTTGACGCTTCACGTCTCAGACTGCGAAATGGGAAGACAGTTCCAATGTATTCATTGCAACATGCAATTTGAAACATTTCCTGAAATGCAAGACCATGCACTTATCCATAACAACAAACCACACTTTGAGTGCAAATATTGTGAAGCAAAATTCTCAACTGCTAAGAGACTTTATAAACACTTTCTAAGTCACCAGAGTGGTTCCGCTGAACATGTGGAAGAGATTGAGAGGTGCACAGACAAAGCTCAGTGCTGTTATATGTGtggcaaatattttaaacaaactcGAAACTTGAGACAGCATCTGAAAGTTCATGAAAATGATGCCTATCTGACCTGTGAGAGATGTGGCAAACGATACAGGCGCGCTGCAAATTTTAAGGCTCATGAACGCTGGCACATGGGAGTAAAGCCGTTCGTGTGTGACAAGTGTGGCAAGAGTTTTTACAGTTTACAAAACTTGAGCAGTCACATGCCGGTGCATTCGGATGATCGTCCCTTTCTCTGCTCACATTGTCCAATGGCTTTCCGCTGGCGACACGTGTTGAACAACCACATGAAAACTCACAAGAATTCTGATTCTTTGTTATTTCAGTGCCTAGTGTGCAAAAGGAAGCTAACAACCAAATCATCGTTGACGCAACATTTGATGACCCACACTGGGGAGAAACCGTACTCTTGCAACATCTGCACCGAGACTTATCGGCAAAAGAAGAGCCTGGACTTTCATATGAAGCAAGCACATGAAGGTACCTCTTTCTTCAAGTGTAATGCTTGCAAGAAACAATTTTTGTCTGAGGAAGAATATAATAACCACATTGAAGAAGGGGAGTGCTTCAGTGATCAGCCACCTGAGCAGAAAGTGTGTAAAAAAAGTAGTTATTGTTGTGATGTGTGTGGTAAGACATTTGCCTTGAAAGTTAGACTCGCCCTTCACCGAACAGTTCACACGGGGGAGCGTCCGTACAAATGTGACAAGTGCGAAAAGACGTATAGATTAACAAGTAGTTTACATTACCACAAACAGAGCGCTCATGGCGTTCGTTTGTTTACTTGCAGTGTATGCTGCAAGAGTTTCCGCTCTAACGTGGCTCTCAGCGTCCACAAGAAAATACATCTAAATATACGTCCGTATGAATGTGTGTTCTGCCACAGATGCTTTTTGAGGAAACCTTACCTCCAGAATCACATTCGACTTCATACAGGGGAAAAACCTTACGTTTGTGACGTATGCGGGCAGGCTTTTGTTCAGAATGGGTCGTTATTCCTGCATAAGAAAAGTCATGCTAAGTCCCTCACAACTTACAGAGCTTTCCTGGAGGCAAATAACAGTTTATCCAACTTGAACAAGAAGAAGGATGCAACAGTACTGTCTACTTTCAGATCCTACCTGGAGGCTACAAACAATTTGCCCAACTCAATCAAGAAATGCGACGAAATTTCTCTAAACTCTGCATGGGTTAAAGGTGACGCAAGTGCTCAAATTTTATGGAGGTGTAGCAGATGTGAAAAATCATTCCCCACGAATCAAGATATGCAAACGCACCTGTTAAATGTGCACAAAGAATGCAGTGCAGCCTGTAAAAGTGACAGTAAAATATCTCTAACTTCAGACCAAAAATGTGACACTTTCAGTTGCGAGGATTGTGGGAAAAAGTTTGCTAGGAGCTTTGAGTTGAAAAGGCACAGTAGATGTCACGTAATGCAAGTTGAAACAGACGGAAATGAGAACTGTGACAGTGAAAGTCTAGACTATGAGCATGAAGCTGATGCAAGTTCCACAAAGAAACGCGCGAAGTCATTTTTGTTTAACTGTATCCACTGCAGAAGGCGCTTTCACCTAAAGGATAATTATATACGCCACTTGCGAATACACACTGGCGAGAGACCTTTCACGTGTCACATATGTGGGAAGCAGTTCAGAGACTCGGGCGGGCTAGCGAGGCATATAAAGGGTGTTCATGCGGGTATTAAAAAATTTGACTGTGATCTTTGTGGGCGCAGCTTTGCATCCAAGGAGACCAAAGAAGATCATCGCCGTATACACACTGGAGAGCGTCCATATGTATGTGAATCTTGTGGGAAAACCTTCAGAGCAAAGGCGTCTTTGTACATCCATAGTAAAATACATACAAACTCCTTTCCACATCACTGTACGTACTGCGAAAAACGCTTCAGACGGCGACAAGAACTTCTGGCTCATGTCTCAACACATACAGGTGAAAAACCTCATGTTTGCGATATATGTACCAAGAGATTTCGTGTAAAAGGTGAGCTTATGAGACACAAACTGGTGCATTCTAGTGACAAACCTCACGTGTGTTCACTTTGCGGTCTGTCTTTTCGACAAAAGAGGTACTTAAAGAACCATGAAAAGGCTATTAGAACGCAAGACAAGGCAAAAGCCGGAGAGGATGAAATCACTGGTGACGTACCTGAACAGgactttgttcaagaacaggcattggagcttccagcaagattcatcTCCAGCCCACAAGGAAAGGTGCACCCAGAACTTGGCTATAGAGAAATGTTCCAGGTTGTGCTAGTTATCAAGTTTGGCCTTCTAGCAGTTCCGAACTGTGGCCAGTGCTTCCGGCCAGCAAGAGACTTACCCAGCAAAACTTTGTCTTGCAGGTTTCGACAGCCTCTCAATGAAAAGACAGTGCATTCAGAATCTTGCACTGAAGTGATGAAGGAGGTGGGCAGGCAATTGCAGAGTGGAGGAATCAAAGGCAGTTCTGTGCGTAGTAATTCTAGTGCTAGGAGAAAAACTGGCGAAAGGACGTTAAAAGGGAAGCGGAGACCAAGTAAAAAAGTGAAAGAGGAATTGCAAGAGCCACCTACTGTCGCGCAGAACTTGGAGTGTAAACAGGAACCAAAGGAGGAGTATGAAGAAACTGAAGTGTGGTACGGACTGACAAATGAGGATAGTGATTTAGAGTTGAAAGCAGAGTTTGAAGACAGAAGGGGCTACCAGTGTAACTTGTGTGGCAAAACGCTCGCTGTGAAGGAAAATCTCAAAGTACATATGCGCATTCACAGTGGCGAGAAACCCTTCACGTGTCACGTGTGTGGTAAACAGTTTCGGTGGGCGGCGGGTCTGGCCCGGCACTTGAAGGAGGTTCACGCGGGTATCAAAGAGCACGCTTGTGATATTTGTGGGCGAATGTTTGCTGCCAAGGCAACTCGTGATGGTCACCGTCGCACCCACACCGGTGAACGACCCTACGTCTGCGATTCTTGTGGCAAGGCATTCAAGACTCAGGCAACGCTGTACATTCATGGCAAAATACACTCGGACCTGTACCCTTTCTCGTGCACGCAATGTGGCAAGAAGTTCCGTCGGCACCAGGACCTGCTTAATCACGTTACTACACACACTGGCGAGAAACCGCACGTCTGTGATGTTTGTGGTAAAGGCTTTGGTGTGAAGAACGACATGAGACGCCATAGACGTATTCATTCGGACGAAAAACCCTACGTTTGTGCAATTTGCGGGCTGCGTTTCGCACAAAAACGATATCTTAAAAATCATGACAAAAGCCACCACAAAAAAGGTAATGTGGCATAA
- Protein Sequence
- MLDAEEHPSPKSKEFKFLTYLDLCGQSEAEQGGNILFVCAFCEEAYENEQQLETHIYEVHLKDENGSESGECKSVRSERKIKRDRKRLEEECISCRKCGISFESREELTLHVSDCEMGRQFQCIHCNMQFETFPEMQDHALIHNNKPHFECKYCEAKFSTAKRLYKHFLSHQSGSAEHVEEIERCTDKAQCCYMCGKYFKQTRNLRQHLKVHENDAYLTCERCGKRYRRAANFKAHERWHMGVKPFVCDKCGKSFYSLQNLSSHMPVHSDDRPFLCSHCPMAFRWRHVLNNHMKTHKNSDSLLFQCLVCKRKLTTKSSLTQHLMTHTGEKPYSCNICTETYRQKKSLDFHMKQAHEGTSFFKCNACKKQFLSEEEYNNHIEEGECFSDQPPEQKVCKKSSYCCDVCGKTFALKVRLALHRTVHTGERPYKCDKCEKTYRLTSSLHYHKQSAHGVRLFTCSVCCKSFRSNVALSVHKKIHLNIRPYECVFCHRCFLRKPYLQNHIRLHTGEKPYVCDVCGQAFVQNGSLFLHKKSHAKSLTTYRAFLEANNSLSNLNKKKDATVLSTFRSYLEATNNLPNSIKKCDEISLNSAWVKGDASAQILWRCSRCEKSFPTNQDMQTHLLNVHKECSAACKSDSKISLTSDQKCDTFSCEDCGKKFARSFELKRHSRCHVMQVETDGNENCDSESLDYEHEADASSTKKRAKSFLFNCIHCRRRFHLKDNYIRHLRIHTGERPFTCHICGKQFRDSGGLARHIKGVHAGIKKFDCDLCGRSFASKETKEDHRRIHTGERPYVCESCGKTFRAKASLYIHSKIHTNSFPHHCTYCEKRFRRRQELLAHVSTHTGEKPHVCDICTKRFRVKGELMRHKLVHSSDKPHVCSLCGLSFRQKRYLKNHEKAIRTQDKAKAGEDEITGDVPEQDFVQEQALELPARFISSPQGKVHPELGYREMFQVVLVIKFGLLAVPNCGQCFRPARDLPSKTLSCRFRQPLNEKTVHSESCTEVMKEVGRQLQSGGIKGSSVRSNSSARRKTGERTLKGKRRPSKKVKEELQEPPTVAQNLECKQEPKEEYEETEVWYGLTNEDSDLELKAEFEDRRGYQCNLCGKTLAVKENLKVHMRIHSGEKPFTCHVCGKQFRWAAGLARHLKEVHAGIKEHACDICGRMFAAKATRDGHRRTHTGERPYVCDSCGKAFKTQATLYIHGKIHSDLYPFSCTQCGKKFRRHQDLLNHVTTHTGEKPHVCDVCGKGFGVKNDMRRHRRIHSDEKPYVCAICGLRFAQKRYLKNHDKSHHKKGNVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995945;
- 90% Identity
- iTF_00995945;
- 80% Identity
- iTF_00995945;