Mita010773.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- lov
- Assembly
- GCA_949699065.1
- Location
- OX452982.1:3015816-3020689[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-19 1.1e-15 57.4 0.0 1 44 72 115 72 116 0.96
Sequence Information
- Coding Sequence
- atgttgatttacCTAAATTCGCAACATGTAGTGTTCGGGCTGGACTCGCCGCTGGGGCTGTTCCCGCCGGGCATGGACCACAAGATGTACCCGCTGATGGACGTGGACCACCGGGGGCCGCCGCTCGACGCGCAGCTCTTCACCAGCGTCAAAAAGAAATGGAGGCCGAAGGGGCAGCACAGCGCACCGCGCGGGGGCCCACCCCGCTCGTGGACGAACGCCGAGCTCACGGAGGCCCTCCAGCACGTGTGGAACAAGAAGATGACCACCAGCCAAGCCTCCAGGATCTTCGGCATACCATACAACTCGCTACTCATGTACGTACGCGGCAAATACGGGAAAAGTCTCAAGCTAGAACAGCTGAGGAAAGACTGCATCGGCGGTCCTTTGGACGTATTGAATCTCAACTCTggtaacaacaacaacaatcaCCCCTCGAAACATCAGCACGACAAGGACGACCACACCCAAAGACCGGCGAGCTCGGAACCGGATATAACATCGAATCCGATGTTCAACCCGTTCCAACAAGGGTTCTACCCGGAGTTCCCGCCCGGGTTCCCGATGCCTCTGAACATGCTGCATTTGCTGCCGCCCAGCGAGAAGGCGAGGGAACTGTATCAATCGATGCCCATGGCCTTGGACTCGTTATCGGGAGTGACGAAGGAGGAGGACTGCAAGAGTGACCGGTCGAAAGATAACTCGGCGGATGAGGAGGGCGACCCGTACCGCACCTCGCACCCGCCGCACCCTCCCGACAACCGCACTCTGCTGCATCACAATGGACAGGATTAG
- Protein Sequence
- MLIYLNSQHVVFGLDSPLGLFPPGMDHKMYPLMDVDHRGPPLDAQLFTSVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSKHQHDKDDHTQRPASSEPDITSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSEKARELYQSMPMALDSLSGVTKEEDCKSDRSKDNSADEEGDPYRTSHPPHPPDNRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651653;
- 90% Identity
- iTF_00267110; iTF_00856519; iTF_00632681; iTF_00638574; iTF_01428975; iTF_00674225; iTF_00686257; iTF_00737389; iTF_00971154; iTF_00166851; iTF_00942730; iTF_00970328; iTF_00025183; iTF_01401201; iTF_01219706; iTF_01099772; iTF_00810919; iTF_01161237; iTF_00663006; iTF_00696407; iTF_00702818; iTF_00700931; iTF_00697254; iTF_00704875; iTF_00701871; iTF_00698194; iTF_00700018; iTF_00703858; iTF_00705911; iTF_00699099; iTF_01182592; iTF_01170494;
- 80% Identity
- -