Basic Information

Gene Symbol
CDC5L
Assembly
GCA_950004255.1
Location
OX465373.1:9836493-9842685[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-17 3.8e-14 52.6 1.8 2 46 9 54 8 54 0.97
2 2 5.8e-12 6.3e-09 35.9 0.1 1 43 60 101 60 104 0.93

Sequence Information

Coding Sequence
ATGCCTCGAATAATGATAAAGGGTGGTGTTTGGAGGAACACTGAGGACGAGATTTTGAAAGCGGCTGTAATGAAGTATGGAAAAAACCAATGGTCGCGCATAGCTTCTCTTCTTCACCGAAAGAGTGCCAAGCAGTGTAAAGCTAGGTGGTATGAGTGGTTGGACCCGAGTATAAAGAAAACTGAGTGGAGCCGAGAGGAAGATGAAAAACTGCTGCATCTTGCTAAGCTAATGCCCACCCAGTGGCGAACTATTGCTCCGATCATAGGTCGCACAGCAGCTCAGTGTCTGGAACGATATGAATTTCTTCTTGATCAAGCTCAAAAAAAGGAAGAAGGTGAAGATGGCAGTGATGACCCTAGAAAGCTGAAGCCTGGTGAGATAGATCCCAATCCTGAAACGAAACCAGCGCGGCCAGACCCTAAAGacatggatgaagatgagtTAGAGATGCTCTCGGAGGCTCGCGCTCGTTTGGCCAATACACAAGGAAAGAAAGCCAAACGAAAAGCAAGAGAAAAACAGTTGGAAGAAGCAAGGCGGTTGGCTGCTCTGCAGAAACGGCGGGAATTACATGCTGCGGGCATTGAACTACCGGCAAAGAGTAAGAGGAAACGAGGAATCGATTATAACATGGAAATCCCTTTTGAAAAACGACCTGCTGTCGGATTTTATGACACGACTCAAGAGGCAGTGGACCCCGCTGAACTTGACTTCAATCGCCTTCGTCAACAGCAACTCGATGGAGAACTAAGatctgaaaaagaagaaagagagCGCCGAAAAGACAAGCAAAAATTGAAGcagagaaaagaaaatgatataCCTGCGAGGATGCTGGCTGGAGGAGAACCAGCGAAGAAAAGGAGTAAGCTGGTTTTGCCGGCTCCTCAGGTGTCTGACCAAGAACTGGAGGTTGTCGTTAAGTTAGGCCGTGCTAGCGAAGTGGCGCGCGAAGCCGCTACTGAAGGTGGCGTCGGTGCCTCGGACGCTCTTCTGGCCGACTACTCCATCACTCCTGGCGTGGGAGCAGCCACACCACGCACCCCAGCACCACAAACTGATCGTATTCTGCAGGAAGCTCAGAACATGATGGCTCTTACACACGTGGACACGCCTCTCAAAGGAGGTCTTAATACGGAATTACAGAACTCCGACTTTGGAGGAGTTACTCCGAGCAAGGAGATAGTTGCTACTCCAAACACAGTGCTTACAACACCTTTTCGCTCCCACCGCGGACCAGATGGTCGCACTCCCACATCTGATTTCAACACTCCAGCCATGTCCATGTCAAGCCGTGGAACTTTCGCAACTCCCATCCGCGATAAGCTCAGCATCAACTCAGAGGAAGGTCTGGAAAACGGAGAAACACCTTACGCCACTCGTGTGTTGAAGGAGTCGCTTCGTTCGGGACTAAGCCGATTACCAGCTCCTCGGAACGACTACGAAATTGTCGTACCTGAAGATCAGACTACGGAAACTCCCACTATCAATGCTTGCGTAATGGAAGACCAGGCTGATGTGGATGCACGAGCACTAGCCGAACAAAAAGCAAAACGTGAAAGAGAGCTAAAAAGTAGATCGCAAGTTGTTCAGCGTGACTTGCCTCGACCTGTTGATGTCAACATGACTGTTCTGCGGCCTTTTAGCGACGTCCCGCTGACGGACCTACAAAAGGCAGAAGAACTGATAAAGCGGGAAATGGTGACTATGTTGCATTATGACGCCGTATTCTCGCCCACTGCGCTGCAGTTAGCAAGCAAGCGTCAGGTGGTGACGCAAGCGCAACATCTAGCCTATCTCGAACAGCATCCTTACGAGCCGTACGGTCAGGCAGAGCTGGAACGCTCCAAGGATCTCCTCCGCAAGGAAATGGAGGTCGTGAAGCAGGGTATGGGTCATGGAGACCTGTCCTTGGAGGCCTACACCCAAGTTTGGGAAGAGTGTCTAGCCCAGGTTTTGTTCCTGCCGTCTCAAAACCGCTACACTAGGGCTAACCTTGCGAGCAAGAAGGATCGGCTGGAATCGTTGGAGAAGAGGCTAGAGCAGAACCGAAATCACATGACTAAAGAAGCCAAGAGGGCTGCTAAGATGGAGAAGAAACTGAAAGTTTTAACTGGAGGCTACATAacacgAGGGCAAGCTCTTGTGAAGCAACTGCATGATCTTTACGACCAGATAGAACAAGCTGCTTTGGAGATGTCCACCTTCAGGTTCTTACAGAGACAAGAGGAAGCTGCTATACCTCGCCGCATTGAGGCGCTCACTGAAGATGTTAGCCGGCAAGTCGAGAGAGAAAAAATGTTGCAGCATAGGTTTGCTGAGCTGACGTTGCAACTAAAGGACCTGACGATTCCTTCGGACATGGTGTAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEFLLDQAQKKEEGEDGSDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELHAAGIELPAKSKRKRGIDYNMEIPFEKRPAVGFYDTTQEAVDPAELDFNRLRQQQLDGELRSEKEERERRKDKQKLKQRKENDIPARMLAGGEPAKKRSKLVLPAPQVSDQELEVVVKLGRASEVAREAATEGGVGASDALLADYSITPGVGAATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTELQNSDFGGVTPSKEIVATPNTVLTTPFRSHRGPDGRTPTSDFNTPAMSMSSRGTFATPIRDKLSINSEEGLENGETPYATRVLKESLRSGLSRLPAPRNDYEIVVPEDQTTETPTINACVMEDQADVDARALAEQKAKRERELKSRSQVVQRDLPRPVDVNMTVLRPFSDVPLTDLQKAEELIKREMVTMLHYDAVFSPTALQLASKRQVVTQAQHLAYLEQHPYEPYGQAELERSKDLLRKEMEVVKQGMGHGDLSLEAYTQVWEECLAQVLFLPSQNRYTRANLASKKDRLESLEKRLEQNRNHMTKEAKRAAKMEKKLKVLTGGYITRGQALVKQLHDLYDQIEQAALEMSTFRFLQRQEEAAIPRRIEALTEDVSRQVEREKMLQHRFAELTLQLKDLTIPSDMV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-