Rmar021380.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- CDC5L
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010007437.1:108816-112496[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-10 3.4e-07 31.2 2.4 18 46 2 31 1 31 0.96 2 2 6.2e-12 1.2e-08 35.9 0.1 1 43 37 78 37 81 0.93
Sequence Information
- Coding Sequence
- atgaaatatggaaaaaatcaGTGGTCTCGAATTGCCTCATTACTCCACAGAAAGTCAGCAAAACAGTGTAAAGCAAGATGGTATGAGTGGTTAGATCCAAGTATTAAGAAAACTGAATGGAGTAgagaagaagatgaaaaattgttacatttgGCAAAATTAATGCCTACTCAGTGGAGAACAATTGCTCCCATTATTGGACGAACAGCTGCTCAGTGCCTGGAGAGATATGAGTTTTTATTGGATCAAGCCCAGAAAAAGGAGGAAGGTGAAGATGCTGGAGATGATCCAAGGAAATTGAAGCCAGGAGAGATAGATCCTAATCCTGAAACAAAACCAGCTCGCCCTGATCCAAAAGATATGGATGAAGATGAATTGGAAATGCTATCAGAAGCCAGAGCTAGGTTGGCTAATACACAAGGTAAAAAGGCTAAAAGAAAAGCAAGGGAAAAACAGCTTGAAGAAGCAAGGAGACTTGCTGCTCTGCAAaAAAGACGGGAACTTCATGCAGCTGGAATAGATCTACCATctcgtaaaaaaagaaagcgtGGAGTGGATTATAATGCTGAAATTCCATTTGAAAAGAGACCTGCTCCTGGTTTCTATGATACTTCTCAGGAGACAGTTGATCCTGCACATTTAGATTTTGGCAGACTAAGACAGCAACATTTGGATGGAGAACTCAGATCAGAGAAAGAAGAAcgagaaagaaggaaagataaagtaaaacttaaacagcgaaaagaaaatgacatACCTTCAGCCATGTTAGAAGGACAGGATCCTGTGaagaaaagaagtaaattaGTTTTGCCGGACCCCCAAATTTCTGATGAAGAATTGCAGCAAGTAGTGAAACTTGGACGAGCCAGTGAAATAGCCCGTGATGTAGCCAGTGAAAGCGGAATTGTAGCATCCGATACATTACTGGCCGATTATTCGTTAACCCCAGGAGTGGGAGCTGTAACTCCGAGAACTCCGGCTCCATTAACTGACAGAATTTTacagGAAGCTCAAAATATGATGGCATTGACGCATGTAGATACTCCTTTAAAAGGAGGAATGAACACTGATTTGCACAATTCCGATTTTGAAGGAGCAACACCTAGAAAGGAAGTAATTGCTACTCCCAATACTGTTTTAACAACTCCTTTCAGAACAAATTCGGCAGatgGTAGAACACCCGGGAGCACTTTCAATACCCCTGCCGGAGCCATGAGTGTTCGAAGTGGTTCTATGAATACTCCTCTCAGAGATAAATTGAACATAAATCCAGAAGAAGGTTTGGATGGGGCCGAGACACCGCATGCCGTGAGGCAAATGAAGGAACAGTTAAGGGCGGGACTTAGTTCATTACCTGCCCcaaaaaatgattatgaaaTTGTAGTGCCAGAAGAAGaagatttaatttctgttGAACCAGAAAGTGCTATCGTCGAGGATCAAACCGATGTGGACGCGAGGCTTCTGGCTGAGCTAAAGATTAAAcgtGAAAAAGAACTTAAAAGCAGATCACAAGTCGTTCAACGTGATTTTCCGCGACCCACTGAAATTAATGTGTCTGTACTTAGGCCAACTTACAGCGATACCCCTCTCACTGATCTGCAGAAGgcgGAGGAATTAATAAAGCGAGAAATGATTACAATGCTTCATTATGATGCCGTTTTTTCACCTACGAACCTGCAGTTGGCTCATAAACGACAGGTCATTAACCAGGCTCACCATTTAGCTTACTTAGAACAGTAtccatataataaatattcccaGCAAGAATTAGATAAAGCTaaagagattttaaaaaaagaaatggaagtcGTCAAACAAGGAATGGGGCATGGTGAAATTTCTTTAGAATGCTATACACAAGTTTGGGAAGAGTGTTTAGCTCAAGTACTCTTTTTGCCCACACAAAATAGATATACAAGAGCAAATTTAGCAAGTAAGAAAGACAGATTAGAGTCTTTAGAAAGAAGATTAGAGCAGAATAGGAGCCATATGACTAGGGAAGCTAGGAGAGCAgctaaaatggaaaagaaattaaaagtgcTTACAGGTGGTTACCAGactcGAGGCCAGGCGTTAGTAAAACAACTTCAAGATTTAAATGATCAAATAGAACAAGCATGGCTTGAATtatcaacttttaaatttttaaaaagtcaagaAGAAACCGCTATTCCTCGCAGAATTCaggCTCTTACAGAAGATGTTAATAGGCAGGTAGAAAGGGAAAACGCTCTTCAGAAGAAATACGGGGAACTAAAATTAATGCTGGATGAATTGAAAGAGCAAAAGAATTAG
- Protein Sequence
- MKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEFLLDQAQKKEEGEDAGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELHAAGIDLPSRKKRKRGVDYNAEIPFEKRPAPGFYDTSQETVDPAHLDFGRLRQQHLDGELRSEKEERERRKDKVKLKQRKENDIPSAMLEGQDPVKKRSKLVLPDPQISDEELQQVVKLGRASEIARDVASESGIVASDTLLADYSLTPGVGAVTPRTPAPLTDRILQEAQNMMALTHVDTPLKGGMNTDLHNSDFEGATPRKEVIATPNTVLTTPFRTNSADGRTPGSTFNTPAGAMSVRSGSMNTPLRDKLNINPEEGLDGAETPHAVRQMKEQLRAGLSSLPAPKNDYEIVVPEEEDLISVEPESAIVEDQTDVDARLLAELKIKREKELKSRSQVVQRDFPRPTEINVSVLRPTYSDTPLTDLQKAEELIKREMITMLHYDAVFSPTNLQLAHKRQVINQAHHLAYLEQYPYNKYSQQELDKAKEILKKEMEVVKQGMGHGEISLECYTQVWEECLAQVLFLPTQNRYTRANLASKKDRLESLERRLEQNRSHMTREARRAAKMEKKLKVLTGGYQTRGQALVKQLQDLNDQIEQAWLELSTFKFLKSQEETAIPRRIQALTEDVNRQVERENALQKKYGELKLMLDELKEQKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00993464;
- 90% Identity
- -
- 80% Identity
- -