Ccol012932.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- CDC5L
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000008.1:4910204-4914138[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-17 3.5e-14 52.6 1.8 2 46 9 54 8 54 0.97 2 2 1.2e-11 1.2e-08 34.8 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGGATTATGATCAAGGGTGGTGTTTGGCGAAACACCGAAGATGAAATCCTGAAGGCAGCTGTTATGAAATATGGGAAAAACCAGTGGTCTAGAATTGCTTCTTTGCTGCACAGGAAATCAGCTAAACAATGCAAAGCTAGGTGGTATGAATGGCTTGATCCAAGTATCAAAAAGACTGAATGGAGTCGAGAAGAAGATGAGAAACTTTTACACTTAGCAAAATTAATGCCCACTCAGTGGAGAACAGTAGCACCTATTATTGGGCGTACTGCTGCTCAATGCCTTGAAAGATATGAGTATCTTTTGGATCAAGCTCAAAAAAAGGAGGAAGGTGAGGATGCTGGAGATGATCCCAGAAAACTGAAACCTGGTGAAATTGATCCAAATCCAGAAACAAAACCAGCTCGTCCTGATCCAAAGGACATGGATGAAGATGAACTGGAAATGTTATCTGAAGCTAGAGCCAGACTGGCCAACACTCAGGGTAAAAAGGCCAAGAGAAAAGCCAGAGAAAAACAATTGGAAGAAGCAAGGAGGCTAGCTGCTTTGCAGAAACGAAGAGAATTAAGGGCAGCAGGGATTGTATTACCATCTCACAAAAAACGAAAAAGAGGAGTTGACTATAATAGAGAGATACCCTTTGAAAAGAGACCAGCATTGGGTTTTTATGATACATCTCAAGAAACTATTGAATCTGCTCCAATGGATTTTAATAGATTAAGACAACAACATTTAGATGGAGAGCTAAGATCAGAAAAAGAAGAAAGAGAAAGAAGGAGAGACAAACAAAAATTAAAACAAAGAAAGGAGAATGATGTTCCTTCAGCCATGTTACATGGGCAAGAACCTGTAAAGAAAAGAAGTAAATTGGTTCTCCCAGAACCTCAGATTTCTGATCAGGAACTTCAGCAAGTAGTCAAACTTGGAAGAACAAGTGAAATGGCAAGAGATGTGGCTAGTGAAAGTGGTATTCAGGCTTCTGATACTCTTTTGGCTGATTATTCATTAACACCTGGTACAGGGGCAGTGACACCAAGAACTCCAGCTCCTCAAACAGACAGAATATTACAGGAAGCTCAAAATATGATGGCCTTGACACATGTCGACACACCTTTAAAAGGTGGCTTGAACACAGAGCTCCAAAATTCAGATTTTGGAGGGATAACCCCTAGGAAAGAATTAATCACAACTCCCAACACTGTTTTAACAACACCATTTAGATCTCAACACTCTGATGGTCGCACGCCAGGTACAGGGTTTAATACTCCAATGGGTTCTACCAGTAGTAGAGGAGGACCACCCGGTTTGGCCACCCCTCTCCGAGACAAGCTAAGTATTAATCCTGAAGAAGGTTTAGAAGGTGGCGAAACACCTCTTGCTTTAAGACAAATGAAAGAACAGCTTAGAACAGGTCTGAGCTTACTACCGGCTCCAAAGAACGATTATGAAATTGTCGTACCTGAAGATGAAGCAGTTGAACCAACTCAGCCTGATAGTGCGATTGTTGAAGATCAAGCAGATGTCGATGCTAGGTTTTTGGCTGAGCAGAAGGCAAAACGAGAAAAGGAATTGAAGAGTAGATCGCAAGTAGTTCAAAGAGACCTTCCTCGTCCCAGCGAAGTTAACATGACTGTCTTGCGGCCTCTTTATAGTGATGTTCCTCTAACTGATTTACAGAAGGCTGAGGAATTAGTTAAACGGGAAATGATTACTATGCTCCATTACGACGCTGTTTTTTCTCCAACCACACAACAATTAGCCCATAAAAGACAAGTTATAAATCAAGCTCAACATTTGGCTTATTTGGAGAAATATCCCTACCACACTTATTCTCAACAAGAATTAGACAAAGCAAGAGAACTTTTAAAGAAAGAAATGGAAGTAGTTAAACAAGGAATGAATCATGGAGAACTCTCACTAGAATCGTATACTCAAGTTTGGGAAGAATGTTTAGCTCAAGTTCTTTTCCTGCCATCTCAAAATCGATACACGAGAGCAAATTTAGCTAGTAAAAAAGATAGATTAGAATCGCTAGAAAAGCGTCTCGAACAAAATAGAAGTCATATGACGCGAGAAGCGAAAAGAGCCGCTAAAATGGAAAAAAAATTGAAACTGTTAACTGGAGGCTATCAGACAAGGGGTCAGTCACTAGTAAAACAGCTCCAAGATTTATATGATCAAACCGAGCAAGCTTATCTAGAGTTGTCTACTTTTAAATTTCTCAAGAAACAAGAAGAAGCTGCCATACCACGAAGGATACAAACCCTGACAGAAGATGTGGCTAGACAGGTCGAGAGAGAAAAAGCACTTCAAAAGAAGTTTGGCGAACTCAAGCAAGAATTAGAAGATTTAAAGCTTGAACAATAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTVAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIVLPSHKKRKRGVDYNREIPFEKRPALGFYDTSQETIESAPMDFNRLRQQHLDGELRSEKEERERRRDKQKLKQRKENDVPSAMLHGQEPVKKRSKLVLPEPQISDQELQQVVKLGRTSEMARDVASESGIQASDTLLADYSLTPGTGAVTPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTELQNSDFGGITPRKELITTPNTVLTTPFRSQHSDGRTPGTGFNTPMGSTSSRGGPPGLATPLRDKLSINPEEGLEGGETPLALRQMKEQLRTGLSLLPAPKNDYEIVVPEDEAVEPTQPDSAIVEDQADVDARFLAEQKAKREKELKSRSQVVQRDLPRPSEVNMTVLRPLYSDVPLTDLQKAEELVKREMITMLHYDAVFSPTTQQLAHKRQVINQAQHLAYLEKYPYHTYSQQELDKARELLKKEMEVVKQGMNHGELSLESYTQVWEECLAQVLFLPSQNRYTRANLASKKDRLESLEKRLEQNRSHMTREAKRAAKMEKKLKLLTGGYQTRGQSLVKQLQDLYDQTEQAYLELSTFKFLKKQEEAAIPRRIQTLTEDVARQVEREKALQKKFGELKQELEDLKLEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00993464;
- 90% Identity
- -
- 80% Identity
- -