Mwes028271.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949987695.1
- Location
- OX465290.1:137275284-137291289[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-115 3.8e-110 369.6 29.4 1 299 294 588 294 589 0.91 2 2 0.12 7e+03 -2.3 4.1 220 244 617 641 593 662 0.47
Sequence Information
- Coding Sequence
- ATGTCAGATAACATAAATAACCATGTCCTGACAAGTGTTAGTGACAACGCTGAAATAAATTACAATTGCATGGCTTCAGACTCTTCTAATAAGGAGAAACTAAATAACCAAAACAAGTCTACAAGTATTTGTAGTAATGATGAAATCATCGAAGACGGATTCGTTTATAGCGAAACTGACTTGTTAGACGAGTTAAATGACAGCGAGGGGAATGACGACGAAGCCGGTGAAGATGGTGAAGGCAACGACAACGACGGTAACAGCAACAACGAAAGATGTGTGAACACTGAAAAAGTTAACAATCATCATCCCATTCCCATCACATCCAACATGGGGAACAAGATTGCAAACGTCGAAGACGACGCAACAACAACTATTATCCATACAAATTCTCATAGCGAAACCACAGACAACAACACAAACTTAAGTAACAACAACGACAATTTATTAAACGTGGCTGCGAGTGTCATACACAACAATTATGTGCCAATTGTATGCACTGATAATGTGACTACTACTGAACCAAATGATAAGCACACAAGTGCAACGCCTCTACCGAAATTGGAGTTGCGCGACTTACCAAATGACGAATTACGCACGATCAGAACAGAATGCGGCGGAGTTGATTCATATTGTCCCATAACGCCACGCCGTATTTTTGATGTGGAATCTGAACCTCATCTATTGTTAAATTGTAatgcaacaaacaacaacaaaaataataagaacgCAGACCCAACGAAAGACACACAGTCTGCTACTACTGATGCAGTCGATGTTAGCGGTAGTAAAAATCATGGCGATGATGAAGGTTATTATTATGCTGATGAGCCTAAAGATGAATTAATTGTACAGTTCCTGGGAGAAGCCAATCGTAttGCCGAGGCACGTTTGGCTGCTCGACGTCAAGCGCGTGCTGAGGCACGCGAAATTCGAATGCGTGAATTGGAACGCCAACAAAAAGAGCAAGAACAAAATGCAGATCGAGTTTTTGACATGCACACTGTGTCCGGCATCGATCCGTTATCACGATCGAGACTGGCAACCGGCGTCGGAAGCTCACCTTTGGGTGCGGTGCTCAATAGTGCAAGAGCCAACTCGATGTCATCACGGCGCAGTAGTGAAGATTCATTAGAAGAAGAAGGACGTAGCCTGCGAGATATACGACACGAGCTTAAGgaTGTTGAAGAAAGGTTCAGAAAGGCAATGATAGCCAATGCGCAGTTGGATAATGAACGTGCCTCACAAACGTATCAAATACAACTCCTAAAGGATAAACTTGAGGAAGTCGAAGAATCATATGCGCAACTTCAGcgtgaatttaaagaaaaatcacgTGATTGCAATGCCTTGAAAAGAAATTTGgataaattaaatgaagaacTCAAATTGGTGCAAGGTCAACTAACTGAACGAGATAAATTAATTGCGGAACAGGGTTTAGTAATTGTGGCCATAGAAAATGATGAGGGTACCGATGCAAAACGTGCTCTAGTCAGCGTGGAGAATGCTCAGCTATTAGGTTCAGTTCAAGGTTCATTAGatGTGCGACTGAAAAGGTTTAGTGAGGAAAAACATCAGCTTTTATCAGAAGTTCAAAAACTACTTGAAACATTAGAGAGTTACAAAAGTCAGGGCAAAGGGCGATCAAACTCGCTGAATGGACCATCCGGGTCAGATGAAGATTATGAAGCACAGAGAGAAGCGAATAAGATAATATCAGATTACAAGTATAAATTGCAAAAGGCTGAACAAGAAATTGCTAGTTTACAAGCCAGTTTAGCACGTTCTGAAACGCAAGTTATACGTTATAAAAGCACAGCTGAAGCTGCTGAAAAGGCAGAAGCTGAACTCAAAATCGAACGAAGAAAGCTGCAAAGAGAgAATCGCGAAGCCATGGAACGTTTGGAGGAACTGGAAACATCAAATAATCACCTGCTAAAGCGACTGGACAAATTAAAGAATGCTAAAAGCGCTTTACTTAAAGATCTTTGA
- Protein Sequence
- MSDNINNHVLTSVSDNAEINYNCMASDSSNKEKLNNQNKSTSICSNDEIIEDGFVYSETDLLDELNDSEGNDDEAGEDGEGNDNDGNSNNERCVNTEKVNNHHPIPITSNMGNKIANVEDDATTTIIHTNSHSETTDNNTNLSNNNDNLLNVAASVIHNNYVPIVCTDNVTTTEPNDKHTSATPLPKLELRDLPNDELRTIRTECGGVDSYCPITPRRIFDVESEPHLLLNCNATNNNKNNKNADPTKDTQSATTDAVDVSGSKNHGDDEGYYYADEPKDELIVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHTVSGIDPLSRSRLATGVGSSPLGAVLNSARANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEVEESYAQLQREFKEKSRDCNALKRNLDKLNEELKLVQGQLTERDKLIAEQGLVIVAIENDEGTDAKRALVSVENAQLLGSVQGSLDVRLKRFSEEKHQLLSEVQKLLETLESYKSQGKGRSNSLNGPSGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357948;
- 90% Identity
- iTF_01357948;
- 80% Identity
- -