Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284417.1:88885461-88920320[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.1e-10 2e-07 32.1 0.0 1 38 526 564 526 569 0.89

2 4 9.9e-13 6.4e-10 40.1 0.1 2 39 581 618 580 621 0.94

3 4 3e-17 1.9e-14 54.6 0.0 1 45 635 680 635 680 0.98

4 4 1.4e-18 8.8e-16 58.9 0.0 1 42 687 729 687 732 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.1e-10	2e-07	32.1	0.0	1	38	526	564	526	569	0.89
2	4	9.9e-13	6.4e-10	40.1	0.1	2	39	581	618	580	621	0.94
3	4	3e-17	1.9e-14	54.6	0.0	1	45	635	680	635	680	0.98
4	4	1.4e-18	8.8e-16	58.9	0.0	1	42	687	729	687	732	0.96

Sequence Information

Coding Sequence: ATGAGTAAGACTGGAACTTGCAAGTGGTATAAGAGTTTCCAAGAAAGTCGTGACGAGGTCGAAAATGACACAACGCTGATCGATGAAAACGTAGAGAaaGGGCTTTTGCGGACAGCAGAACAATTGAAAATTAAAGGACTTTGTGAGACAGCCGAAAGTGTTGATGACATCTCAGAGGCGGCCACCATCACAGTGTCTGAGAATATAACCCAGGCGGTTGTTGGAAACATTGTGAATCCGGCACAGGGTAATGCAATAGTTACTACACATACAATTGCAAACAACACTAATACGCATACAACAACAGCAAAtctaaataataacaataacattaattcaaatattaatGCTATAGTTGCCCCACCAACGCCTACGTCTACGCCGATCTTACGAAAATCTCGGGTCAGAAAACGCTCGAAATCGCCTGATAcgaatcaacaacaacagcagcagcaacaacagcaacagcagcagcatcatcaacaacaacaacatcagcagcagcagcagcagcaacaacaacaacatcaacaccatcaacaacaacagcaagcaATATTAAGTCAGAATCTAAACACAGCGGCTATTGTTAATCTGCAACAAACATCGTCAGGAAGTTATATACCGGTGTCTGGGGGTCAAGCAATAACGACAACGGCTGTTAGTCAGCAAAATTCTGAGTCGAACGAGGATATTAAACCGAGCGCTCAGAAGATCTGTAAAACAGAAGCCGCCAATTCGCCGACATCGAATAATGGCAGCGTAACTGTTCAGCAAGGAACAGCTATTGTGACACAAATTGTTGTAGCACGCGACTCAAAAGATAAAAACATGACCAGCTTAGGAATGGGAATGaACGGTGGTCTACTTGGAGTCCCTATGGGTTTCCTAGACTTTGCACCTGAACCACCAGCACCATCAGCCACACCTGTCACAGTCACAGAACATGTCGACTTGTCGTGCAATCCCAGTACGGATACCAGAGACTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACATATGATCCAACGGCTCGATCAATCGCCAATGCATACGATCCACCATCAATCGTCGACGGGCGACGAGAGCAATTCAAATCTCATTCAACATATAAAGAGTGAAGTGATCGAGgtgaaacagcaacaacaacagcatcatcatcagcaacagcagcagcagcaacaacagcagcagttgcATACGCAAGCATTATCTCAGCAAGGACAAtctcaacagcagcaacagcaacaacaacaacagcagcaacagcatcaacaacagcaacagcatcagcaacaacaacagcaacagcatcaacaacatCAAGATATTTCGGGTGCAACTGTTATGGAAATTGATCCAAGTAATATTAAACATGAACCGGGAATGATTATCACACCGGAGATAGTGACTATGATGGCTACGGGTCATATGGATGCTAGTGAGGATTCGTTGATGATTGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAACTTGGACCAACAGCATGATATTAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTCAAGAATCAGAATATGAGTTTGACGAAAGCCTCTGTGACATATGGTATCCCATCGACAACATTATGGCAACGTGCCCATCGAATGGGTATTGAAACACCTAAAAAGGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCATTAGAGGCATTAAGAACTGGTCAAATATCAGCTAATAAAGCTTCGAAAGCATATGGAATTCCGTCCTCGACCTTATATAAAATTGCTCGACGTGAAGGTATACGATTGGCGGCACCATTTAATGCGGCGCCAACAACATGGACGCCTGAAGATTTAGAACGTGCTTTAGAAGCAATACGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGCATCCCGACAGGTACGCTTTATGGTCGATGTAAGCGCGAGGGTATTGAATTATCGCGCTCCAATCCCACACCATGGTCAGAGGATGCCATGAATGAAGCATTAAACTCTGTTAGggtTGGACAAATGTCTATTAACCAAGCGGCTATTCATTATAACCTACCATACAGTTCACTATATGGCCGTTTTAAACGCGGCAAATATGACATTACAAACACAAGTTCAACGTTAATCAATAACACATCGGGTAACACGAGTGGAAGCATTGAAATTATCGAACACAGTCCAGagaattcgCAATTCCAATACAGTCCGGCGCCGCAGTCTAATCATCAAAcccaacagcaacagcagcaacaacaacaacagcagcatcaacaacaccagcagcaacaaccgCAACCACAACAACACATCCATCAACATGTTGTACACATTCAACAGCAACATACACAACAACCTCATCATCAACAGCAACATATCCAACAGCAGGATGTTGTAACTTCGACAAGTCAAGTCCACAGCCAAGCTGGACAAATCCAACAGATCTATCATCATCATAGCACTCCCGAGAGAAGTTGA
Protein Sequence: MSKTGTCKWYKSFQESRDEVENDTTLIDENVEKGLLRTAEQLKIKGLCETAESVDDISEAATITVSENITQAVVGNIVNPAQGNAIVTTHTIANNTNTHTTTANLNNNNNINSNINAIVAPPTPTSTPILRKSRVRKRSKSPDTNQQQQQQQQQQQQQHHQQQQHQQQQQQQQQQHQHHQQQQQAILSQNLNTAAIVNLQQTSSGSYIPVSGGQAITTTAVSQQNSESNEDIKPSAQKICKTEAANSPTSNNGSVTVQQGTAIVTQIVVARDSKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQQQQHHHQQQQQQQQQQQLHTQALSQQGQSQQQQQQQQQQQQQHQQQQQHQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDASEDSLMIANGSPNDNNEPHYTNLDQQHDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDITNTSSTLINNTSGNTSGSIEIIEHSPENSQFQYSPAPQSNHQTQQQQQQQQQQQHQQHQQQQPQPQQHIHQHVVHIQQQHTQQPHHQQQHIQQQDVVTSTSQVHSQAGQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314183;
90% Identity: iTF_01542127;
80% Identity: -