Math011358.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992182.1:7086616-7088706[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-08 1.2e-05 26.2 0.0 3 41 16 54 14 56 0.94
Sequence Information
- Coding Sequence
- aTGGCGGATccaaaagataaaattaaatattataattggaACAAGGAGGACCTAGAAAGAGCTATTCTGGCTTACGAAAACAAAGAATtaagtttgaacaaaatttcaaaaaccTATACAATTCCAAAACCTACACTTCTACGgcatataaaaaagaaaaataagatAGCTGTTGATATGAAAATTCAAAAAGGGAGACCGGTTATCTTCGATGTCGAAACAGAAAATAAGTTGGCTGAGCATATTCTTCATCTCGAAACACACATGTTTGGTCTAACAATAAACGATATTCGACGTCTCGCGTTTGAAATTGCTGAAATTCATAACATtcagaataattttaataaacaaaaacgcATGGCTGGCAAAGCATGGTTCTACAAATTTATGAAAAGGCACCCACAGCTTAGTGTTCGACAACCTGAAAACACATCTATGAATAGAATTAAAGGATTCAATAGAGAAAATGTGTATCACTTTTTTGATTTGTTAGAGAAGATTGTAGATACAAATGGTATAGAACCTACCAATATCTTCAATGTAGACGAAAGTGGATTTTCAACCGTCCAAAAGAAAGCTCAAAAAATTGTAGGATTAAAGGGAAAGAAGCAAATTGGCGCCGCTACTAGTGGAGAACGAGGTGTCAATACCACTGCCGTATGCTGCGCTAGTGTATCTGGCCAATTTATCCCTCCAATGCTAATATTTAAAAGGATGAGACAAAACCCGGAACTTGCAAATGGTGCTCCTTTAGGCAGTATTGTTACTGTTTCTGAAAGCGGTTACATCAACTCTGCGCTCTTCGTTGAATGGCTAAAgcactttattaaaatagtgaAGCCCACACTTGAAAAGAAAGTTCTGCTGCTTATGGATGGACACACAACACACTCTAAAAATTTGGAAGCTCTGTGTTTAGCAAAAGATAATGGAATAATACTATTACAACTACCAGGTCATACGACAAATCGAATTCAGCCTCTTGACGTTTCGTTTTTCAAACCACTGAGCACTTATTATATCCAAAGCACAGAAAAATGGTTGAGAGGCGGGCTTGAGGCTGGGCGACAAGTAACACAATACCAAGTTGCTCAATTATTTGGAGAAGCCTACGAAAGAGCAGCAGTGATTGGCAATATTGTGAATGGATTCAGAGCTAGTGGAATTTGGCCCATAAATAGACATATTTTTCCGGAGCATATGTTTGAGGCAGCTGACAATTTGCTAACCGCTGAAACAATGAATTCAAGCAACGAAAGCGTATCACTGTTACAAAATTTTACAGAATCAGAAAATAAAGACGacctaaagaaaaaagaaaaggtAGAAGAAAAGGACGACAAAGAAAACtacaataaagaaaataatgacaaagaaaattacaataacGAAAAGGACGACaaagaaaattacaataaagAAAAGGACGACaaagaaaattacaataatgAAAAGGACGACAAAGAAAACTACAATAAAGAAAAGGACGACAAAGAAAATTGCAAAAAAGAAAAGGACAATATAGAAAAGGAGCATTTGATTTCTTCTCTTGCTGAAATACATGCACAACCATCGACGTcgaaaaaacaatatattcaacaGAAAACTACACCtgttgatattaaaaaaacaataaaagctTTATCACCACTTCCAAAAAATACATCGAAAAAGAAGAACACTATACAAAAAGCTATTGAAATTACATCAAGCCCATATAAAAATCAACTAGAAGAGAAGCTGAAGCAGAAAAAACTTAAAGTAAAGAAAGGAAAGGTTTGTAAACCAAAGAAATACCAAACAGTGAAAAAAGGTAAGAAAACAGCTATATCCAAGGGCAAATGCAAAAGTTTTAAGAGGAAACGATCCTCTTCCATTACTAGTAGCGATTCAGATGAGACAATTGTGGTGGAATTAGATGACGATGATGACAGCGATGATGATCTCGAAAATATATGTGGAAAGTGTAATCGTTATTACTATGATAAAAAGGGTCCAAACGTTGATTGGATTCAATGCATTCGCTGTCACCGGTGGCTACATGAGACGTGTACTTCGAATCCAGACATTTGCGATGATTGTCTCCAATAA
- Protein Sequence
- MADPKDKIKYYNWNKEDLERAILAYENKELSLNKISKTYTIPKPTLLRHIKKKNKIAVDMKIQKGRPVIFDVETENKLAEHILHLETHMFGLTINDIRRLAFEIAEIHNIQNNFNKQKRMAGKAWFYKFMKRHPQLSVRQPENTSMNRIKGFNRENVYHFFDLLEKIVDTNGIEPTNIFNVDESGFSTVQKKAQKIVGLKGKKQIGAATSGERGVNTTAVCCASVSGQFIPPMLIFKRMRQNPELANGAPLGSIVTVSESGYINSALFVEWLKHFIKIVKPTLEKKVLLLMDGHTTHSKNLEALCLAKDNGIILLQLPGHTTNRIQPLDVSFFKPLSTYYIQSTEKWLRGGLEAGRQVTQYQVAQLFGEAYERAAVIGNIVNGFRASGIWPINRHIFPEHMFEAADNLLTAETMNSSNESVSLLQNFTESENKDDLKKKEKVEEKDDKENYNKENNDKENYNNEKDDKENYNKEKDDKENYNNEKDDKENYNKEKDDKENCKKEKDNIEKEHLISSLAEIHAQPSTSKKQYIQQKTTPVDIKKTIKALSPLPKNTSKKKNTIQKAIEITSSPYKNQLEEKLKQKKLKVKKGKVCKPKKYQTVKKGKKTAISKGKCKSFKRKRSSSITSSDSDETIVVELDDDDDSDDDLENICGKCNRYYYDKKGPNVDWIQCIRCHRWLHETCTSNPDICDDCLQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00824675; iTF_00824674; iTF_00636299; iTF_00809998; iTF_00075441; iTF_01090673; iTF_01090672; iTF_00075443; iTF_00075458; iTF_00075444; iTF_00985973; iTF_00771863; iTF_00074446; iTF_00821720; iTF_00332275; iTF_00821718; iTF_00821719; iTF_00821721; iTF_01340028; iTF_01178462; iTF_01264466; iTF_01333738;
- 90% Identity
- iTF_00075443; iTF_00075458; iTF_00075444; iTF_00074446; iTF_00771863; iTF_00985972; iTF_00985973;
- 80% Identity
- -