Hpro010203.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990131.1:6875945-6877936[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-10 5.3e-07 30.4 0.0 3 41 16 54 14 56 0.95
Sequence Information
- Coding Sequence
- aTGACGGAGCCTaaagctaaaattaaatattataattggaACACAGAGGACCTAGAAAGAGCTATTGCGGCTTacgaaaataaagaattaagtttaaacaaaatttcaaaGACTTATTCTATTCCAAAACCAACAATTCTACggcatataaaaaagaaaaataagattgCAGTTGATGCCAAAATCCAAAAAGGAAGACCGAATGATGAAAATGGCATAGAACCTactaatatcttcaatgtagaCGAAAGTGGATTTTCAACCGTCCAAAAGAAAGCTCAAAAAATTGTAGGACAAAAGGGAAAGAAGCAAATTGGCGCCGCTACTAGTGGAGAAAGAGGTGTCAATACCACGGCGGTATGCTGCGCTAGTGTTTCCGGCCAGTTTATTCCTCCAATGCTAATATTTGAAAGGATAAGAAAAAATCCAGAACTAGCAAATGGTGCTCCTTTAGGCAGTATTGTTACTGTTTCTGAAAGCGGCTACATTAACTCTGCGCTCTTTGTGGAATGGTTGaagcattttattaaaattgtaaaacccACGCCTGAAAAGAAAGTTCTGCTGCTTTTGGATGGGCATACGACACACACAAAAAATCTCGAAGCTCTGTGTTTAGCAAGAGATAATGGAATAATACTGTTCCAACTACCAGGTCATACGACTAACCGAATTCAGCCTCTTGATGTATCATTTTTCAAACCCCTGAGTACTTATTATATCCAGAGCACAGAAAAATGGTTGAGAACCAATCCTGGGCGACAAGTGAAACAATACCAGGTTGCTCAATTATTTGGAGAAGCCTATGAAAGAGCCGCAGTGATTGGAAATATAGTAAATGGATTCAGAGCTAGTGGAATTTGGCCTATAAACCGACATGTTTTTCCAGAACATATGTTTGAGGCTGCTGACAATTTATTAGCCGCTGAAACAATGAATTCGAGCAATGAGACCGTATCAgtgttacaatattttacagAATCGGAAACAAAAGATGACCTCAAGGAAAAAGAAAAGGTAGAAGAAAAAGTTGAGAAGGTAAAGCACGATATAGAAAATGACAATAAAGAGAATGGCGGTAAAGAAAAtgacaataatgaaaaaaaacatttgatttCTTGTGTTGCTGAAATACACGCACAACCATCGACGTCGAAAAAAACACATATTCAATCAAAAACTACACCTgctgatattaaaaaaacaataaaagttttatCGCCACTGCCCAAAAACACATTGAAAAAGAAGAGCACTATACAAAAAGCTATTGAAATTACATCAAGTCCATATAAAAATCAACTAGAAGAGAAGCAAAAGAAAGTCaaagtaaagaaagaaaagattggTAAACCAAAAAAACACCAAAcggtaaaaaaagaaaataaggtGACAGCTGTACCCAAGGCCAAGTGcaaaagttataagaggaaacgATCTCATTCCATCACTAGTAGCGATGATTCAGGAGAGACACTTGTTGTAGAactagatgatgatgatgacagcGATGATGATCTTGAAAATATATGTGGAAAGTGCAATCGTTCTTACTACGATAAGAAGGGTCCAAAAGTTGATTGGATTCAATGCGTTCGCTGTAAACGGTGGCTACATGAGACGTGTACTTCGAATCCAGACATTTGTGATGATTGTTTCCAATAA
- Protein Sequence
- MTEPKAKIKYYNWNTEDLERAIAAYENKELSLNKISKTYSIPKPTILRHIKKKNKIAVDAKIQKGRPNDENGIEPTNIFNVDESGFSTVQKKAQKIVGQKGKKQIGAATSGERGVNTTAVCCASVSGQFIPPMLIFERIRKNPELANGAPLGSIVTVSESGYINSALFVEWLKHFIKIVKPTPEKKVLLLLDGHTTHTKNLEALCLARDNGIILFQLPGHTTNRIQPLDVSFFKPLSTYYIQSTEKWLRTNPGRQVKQYQVAQLFGEAYERAAVIGNIVNGFRASGIWPINRHVFPEHMFEAADNLLAAETMNSSNETVSVLQYFTESETKDDLKEKEKVEEKVEKVKHDIENDNKENGGKENDNNEKKHLISCVAEIHAQPSTSKKTHIQSKTTPADIKKTIKVLSPLPKNTLKKKSTIQKAIEITSSPYKNQLEEKQKKVKVKKEKIGKPKKHQTVKKENKVTAVPKAKCKSYKRKRSHSITSSDDSGETLVVELDDDDDSDDDLENICGKCNRSYYDKKGPKVDWIQCVRCKRWLHETCTSNPDICDDCFQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985971;
- 90% Identity
- iTF_00821719;
- 80% Identity
- iTF_00821719;