Mcix014522.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melitaea cinxia
Gene Symbol
-
Assembly
GCA_905220565.1
Location
HG992211.1:3793060-3802730[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.023 2.5 9.5 5.2 1 20 192 211 192 214 0.93
2 30 0.0025 0.27 12.6 0.6 2 20 248 266 247 268 0.93
3 30 0.09 9.6 7.7 0.3 3 23 295 315 294 315 0.95
4 30 2.1 2.2e+02 3.4 0.2 2 15 332 345 331 352 0.75
5 30 0.086 9.2 7.7 2.2 1 23 362 384 362 384 0.99
6 30 0.029 3.1 9.2 0.3 1 23 404 426 404 426 0.96
7 30 0.00033 0.036 15.3 2.3 2 23 466 487 465 487 0.96
8 30 0.00033 0.035 15.3 2.3 2 23 530 552 530 552 0.97
9 30 0.00078 0.083 14.1 1.3 1 23 602 625 602 625 0.96
10 30 0.00032 0.034 15.4 0.2 1 23 680 702 680 702 0.97
11 30 0.013 1.4 10.3 6.1 2 23 714 735 713 735 0.96
12 30 0.073 7.8 7.9 1.8 2 23 747 768 746 768 0.96
13 30 0.01 1.1 10.6 1.7 1 23 778 800 778 800 0.98
14 30 0.063 6.7 8.1 5.4 1 23 829 851 829 851 0.96
15 30 9.5e-05 0.01 17.0 5.1 1 23 862 884 862 884 0.98
16 30 2.4e-05 0.0025 18.9 1.5 1 23 892 914 892 914 0.97
17 30 0.0026 0.27 12.5 0.1 2 23 934 956 933 956 0.97
18 30 0.088 9.4 7.7 3.7 1 23 1003 1025 1003 1025 0.97
19 30 0.01 1.1 10.6 2.1 2 23 1036 1058 1035 1058 0.95
20 30 0.00064 0.068 14.4 0.2 2 23 1081 1102 1080 1102 0.95
21 30 8.8 9.4e+02 1.4 5.9 2 23 1145 1167 1144 1167 0.94
22 30 0.0008 0.086 14.1 0.2 2 23 1183 1204 1182 1204 0.95
23 30 1.1 1.1e+02 4.3 4.4 5 23 1214 1232 1211 1232 0.94
24 30 0.012 1.3 10.4 0.8 2 23 1243 1265 1242 1265 0.95
25 30 0.93 99 4.5 4.2 2 23 1282 1300 1282 1300 0.89
26 30 0.11 12 7.4 1.6 2 21 1304 1323 1303 1324 0.94
27 30 2.3 2.5e+02 3.2 2.0 2 23 1345 1366 1345 1366 0.95
28 30 0.4 42 5.6 1.0 2 23 1373 1394 1372 1394 0.93
29 30 0.0045 0.48 11.8 0.5 2 23 1405 1427 1404 1427 0.95
30 30 0.77 82 4.7 0.9 2 19 1465 1482 1464 1482 0.94

Sequence Information

Coding Sequence
ATGGCACTCAAACTTGGAAAATGCAGACTTTGTCTCAAGCTCGGAGATTTCTATTCCATCTTTACGGTGGACAACAATTTGCAGCTCGCCGAAATGGTGATGGAATGCGCGCGGGTTAAAATATTTGAAGGAGATGGCCTTCCAGATAAGATATGCAGTGAATGCATTCAAAAACTCAGTAGTGCTCACATATTTAAACAACAATGCGAGCGGTCTGATCAAGAGCTAAGACGAAATTATGTTCCTCCACCAGGCTTCAGTTCACCGACACCACCCAACAGACAGAGCAGCGATTCAGTATTGTCATCGCAAACTGAAGTCTCTAAACCCTCATCGACATTCGAAAGCAAGGTGACACCAGTCAGTAGATCACGGAAGCGAAGCAGAGACAGCCTTGACAATACATCTACGAGTAGCCGCTCTCGTGATTACCAACCGGGAAGTTCGAAGCGGGTTGACCAACTTCGAATGTCTCAGAAGAAACCCAAGCTTTCTATAAATTCGGATTCAGATTTCGATGACAATAGCCCTTCTTTTTATTCCCCTGAAACAGACTCCGATGAACCTTTGCAGCATAAGTGTAAACAATGCGACAAAGCGTTCCGCTCGATTAAAAGTCTATCAGCTCATTCTAAATGTCACAAACGAAAAAGTGTGCTAAATAAATTACAAATAGACACGAAAAATTCTCTTGAATCGCCAAAAGAAATTAAAGATGCTGTAGATGATGACAGCAAACTTTCATGCGATAAATGTGGAAAAGATTTTAAATTAAAAATAATGTTAAAACGCCATCATGATATCTGCGGGAAATCGCCTCGAAAAGAGTTAATGGTTTCTTTAGAGCCAATAGACTCTGTGCCACAAACTAGGAAGGTCGACTGTGATATGTGCACGTCGAAATTTAAAACGATTGAGGACCTAGAAGCGCATAAAGTAATGCACGCGGCACTTCTTAAAGGGACTATCAATGAAACTAAAGAAGTAGTTGTCCCTTGTTTATATTGTGGCCTTTCTTTTGACGATTATAATCTTCATAACGCTCACTTCAATACATGTCCTCAGAAGTCCGACCTTAGTACATTCCAGTGTCCTATTTGTATGAGAGCAATAACAAAAAAGGGATGTTATTTCTTACACCTTAGAACGCATTTTTTTCCGGTATCGTCAACGAAATCCATAGCTGAAGTAGCTACTAAACAAGAAATCTTTCAATGCCGTATGTGTAATATGAAACTACAAAATCAAGAGTCATTGATTACCCATCTGGCTGGGCACATGTCTAATATCGACGACGCTGATGAAGGAGGCGACGAAGAATCAAGGGCAAGTACAATAGATGACTCAGCATCAGCTCATTCAGAATACAGTGCAAGCATCTCAAGTGGACCTTTAAAGTGCAAATCTTGTGATAAATCATTTAAATATAAGAAAGCTCTATTAACGCACGAGCTAAAACATTCTCAAGGTGATATAAAAACTGAAGTTATAGAAAAGGATAATTCTTCAAGTTTGTTAAATGAAACTACTGCTTCATTAAACCAATATGAATCGGAATCTAGTCAAGATGAGGGCGAAGAGGATAATACATGTGATATTTGTGAAAAGCAGTTCTCATACAAGAGACTACTCCTGCAACACAAAAGAACCAAACACCCAATGACTGCAGGATACAAGCGAGCTAAGATCAATTTAAAGGATTGCTCCGTCCGGTGTTTGATATGTGATATTGAAATGAAAGTCAGTGCGATTAATGAGCACAATCAGACACATATATCGGTCAATATAAAGCCCAGAAATTTGTACACGTGTATGGAGTGTGAAGAGCAATTCAAGAGCTGCAGTGCGCTGGCGAATCACATTAAATTCGTGCACCGTCTCAAACAACAGCAAGTGAAAATGAATGTGGCGCCAGCAGATCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGAGCTCCAGAGTCACAACGGCTTTGGTGAGGTTCCCGTCAACAATGAATCACTGGTAAACATGAGTGGCTTTACTTGTCCCATTTGTAACAAGCAATTACCGACCTTGATATCTCTCAAACGACACGTTAATTGGCATAACCACGTCGGGAAAAGCTTGGAGAAACAGCTCGAGTGTTTCGTTTGTAAAGAGACTTTCCGGTTTCAGTGTCATTATAAGTTACACATGCGTGAACACTATAATGACACGAATCTCGATCCAAAACTGTTGACCTGCTCCATCTGCAATCGTAAAAGTAAACATCTCCGCGCAGCTCAGGCGCATATGAACTTTCATAAACAGACGCGTTTTAAAAATAAAGATTACGAATGTTCTATTTGCAAAAGGATTTTCCAACATCGTAAAGTTTACCTCTCACATATGGCTATACATTATAAGCGCGGTGAAAGTACTACTAACACTATTGTGGGTTCTGAGCTACCTAACTCAGTGGATAAAAACAAATTTGACGGTACCCATACCTGTCATCTATGTGGCAATGTTTGTGATTCGGAAAACTCTCTGAAACACCATATAATTTGGCACAAGTCCAAGACATCTTTATTTGGAGCTAGACACGAATGCCACATTTGCAACTTGCGGTTTACAAATAAAAAGCGCCTTGAGCTTCACATAAGAACACATTTTGAGGATGATAACGGACCTTTTAAATGTCATATTTGTGGGAAGGGTTACATCGATGAGGATTATTTTAAGAGACATGTAAAAGGCCATAACTTTGATCATCAATCACATAAAAAACGAATAGAGAAGCTTAGGAAAAATAAGGTGAAGTGTCCGATTTGTGCTCGTTACTATCCAGACTTGGTGAAACTTATTCGCCACTTGCGACGGACACATCCAGAGAGTAAGATGATTAAGGAGGACCCGGATGCGCCACCACCGAACTATTATTCATGTAAATTATGTGCTAAAGTGTTCTTAGACGAGAGGAGATTGCAGTTCCACGAAGAAGCCCATTTACGAAAACCAGAATTTTTCAAATGTAAGTTCTGTGGTAAAAAGACAATATCACTGAAGAATCACAGGGTCCACATCAAAGGTCATCTCACACAGAAATATATCGATAATCCACTAAAATGCCCACACTGTGAAGAAAAGTTTATGCGAGGTTATGATCTACATTATCATTTACGTGACGCTCATGATATCAATGAGACTTGGATAGAAGAACGGGGGAAACAGACTTTAGACGGTCCACTGAAAGACTTACAATGTTCTATATGTTACAAAGTCTTAGCCAGTAAAGGAAACTTTGAAAGGCACATAGATTACCATAACTCTCTTAGATGTAATTACTGTTTTGATTACTTTAGTTCTCTTCGATTCTTGGAGGGACATCTTGCCTTCAGTTGTGACAAGAAAAAACTTATTGGTGAAACTGAAATTTATCCGAAAAAGGTAAAGTGTCATATTTGTTACAAACCTTTCCACTTGCAAGTGAAGTTGGATTGCCACTTACGCACTCAACATGACATAAGAACGTTTAAAAAAGCTTCCGAGGGGAAACAGGAAATTGTTTGTGACTATTGTTTTAAAGTATTTGAAAATGAATATGCTCTCAATACTCACAAGATTTATCACCGTACTGTCGGCTACTACGGCTGTATATATTGTAACAGAAAGTTTAACAACATGACAAGTTATAGAAAACATAAAAATCACCATTTTTCACAAATGAATATTGACGAACCAACAAAATGTGAACATTGTGATGAAACATTCGTAGCATTCAGAGAAATGATATACCATATGAGGGACGTTCATGGTGACGATAAAGAATGGATTATTCAGCCGAAAGTATCCATAGAAGAAAAATGTAATATTTGTCAGAAGACATTCTTCAATTTACACAGACATTTAGATTACCATGAAGAAAATAAATGCAAAAAATGCGGAGAGTACTTCTTCTCTCGAGCAGACTTCGATAACCACCTCTGTGCCATCGACAGCGATGAGGAAGTCACTGAAAATAATACTAATGGGACTCGGCCTGTGTATGAAGAATGTAGCTTCTGTTTCAAACCAGTGACCAGAAAGAATTCGAAACGTTCACACAATCAAATTCATAAAGGTTCTGGTTCTATATCATGTCGTTTCTGTACTCTTAAATTTAAAACTATGGACGCTTTCAACATTCACGCGTTTTCACATCGAAGTAGAAAATACAAGAAGAAACCGATAAAGTGTCGTAAGTGTGGCGAACAGTTCGTGAAGTACGGTCCATTTATAAAACACATGAGGTTCGTTCACAAGTGTTCCAAGAAGCTTCACTACAGAGCCACGGTGAAGCCAGAAAAGTGCGTCGTCTGTAACGAAGATTTTCCAAATCTACACAATCATTATCGCGCTCATCTGCAAAATCAATGTCAGGAATGTCTCAAATATTTTACGTCCTCCAAAGCATTTTCGTTGCACGATTGCAATAAAGAGGATGCAGATCCATCTAAAGTGTTCACAAGTGACGCCAATTTACCAGCACTTATTAATTCCTACGTTCCGAAAGATGAAAAAGACGATGAGAAGTATTACGGTCACGACGACGAAGGGGAAGAAGAGGACGAGAGTGCCAACTTGGAGACAGGGACGCAGGACGAAGACAGCCAAGCTTCCATTGATATTGATGAAGGAAAAGTCCATAACATGGTGCACGCGCCCATCATCTCCGACGTGCTATCGCTCTACAAGAAGAAGGACGTTAATACGAATTGCGAGACTGGCAACGATGAACAAAATAGTGTCAGCGGCAGCGTTGTGATCCTAACTGATGATGATTCTATAGGTTTCGAGGGTAATGTACCTGTTATAACGATAGATGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKIFEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSSPTPPNRQSSDSVLSSQTEVSKPSSTFESKVTPVSRSRKRSRDSLDNTSTSSRSRDYQPGSSKRVDQLRMSQKKPKLSINSDSDFDDNSPSFYSPETDSDEPLQHKCKQCDKAFRSIKSLSAHSKCHKRKSVLNKLQIDTKNSLESPKEIKDAVDDDSKLSCDKCGKDFKLKIMLKRHHDICGKSPRKELMVSLEPIDSVPQTRKVDCDMCTSKFKTIEDLEAHKVMHAALLKGTINETKEVVVPCLYCGLSFDDYNLHNAHFNTCPQKSDLSTFQCPICMRAITKKGCYFLHLRTHFFPVSSTKSIAEVATKQEIFQCRMCNMKLQNQESLITHLAGHMSNIDDADEGGDEESRASTIDDSASAHSEYSASISSGPLKCKSCDKSFKYKKALLTHELKHSQGDIKTEVIEKDNSSSLLNETTASLNQYESESSQDEGEEDNTCDICEKQFSYKRLLLQHKRTKHPMTAGYKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCMECEEQFKSCSALANHIKFVHRLKQQQVKMNVAPADLADFCEVVVTKAEPLDELQSHNGFGEVPVNNESLVNMSGFTCPICNKQLPTLISLKRHVNWHNHVGKSLEKQLECFVCKETFRFQCHYKLHMREHYNDTNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKRIFQHRKVYLSHMAIHYKRGESTTNTIVGSELPNSVDKNKFDGTHTCHLCGNVCDSENSLKHHIIWHKSKTSLFGARHECHICNLRFTNKKRLELHIRTHFEDDNGPFKCHICGKGYIDEDYFKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCPHCEEKFMRGYDLHYHLRDAHDINETWIEERGKQTLDGPLKDLQCSICYKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGETEIYPKKVKCHICYKPFHLQVKLDCHLRTQHDIRTFKKASEGKQEIVCDYCFKVFENEYALNTHKIYHRTVGYYGCIYCNRKFNNMTSYRKHKNHHFSQMNIDEPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIIQPKVSIEEKCNICQKTFFNLHRHLDYHEENKCKKCGEYFFSRADFDNHLCAIDSDEEVTENNTNGTRPVYEECSFCFKPVTRKNSKRSHNQIHKGSGSISCRFCTLKFKTMDAFNIHAFSHRSRKYKKKPIKCRKCGEQFVKYGPFIKHMRFVHKCSKKLHYRATVKPEKCVVCNEDFPNLHNHYRAHLQNQCQECLKYFTSSKAFSLHDCNKEDADPSKVFTSDANLPALINSYVPKDEKDDEKYYGHDDEGEEEDESANLETGTQDEDSQASIDIDEGKVHNMVHAPIISDVLSLYKKKDVNTNCETGNDEQNSVSGSVVILTDDDSIGFEGNVPVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01079240;
90% Identity
iTF_00986495;
80% Identity
-