Mqua006668.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melipona quadrifasciata
Gene Symbol
zfy1
Assembly
GCA_001276565.1
Location
KQ435848.1:918027-923459[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 1.1 90 3.5 2.3 2 22 309 329 309 329 0.95
2 23 5.5e-07 4.7e-05 23.3 3.2 1 23 339 361 339 361 0.99
3 23 1.8e-06 0.00015 21.7 1.1 1 23 367 390 367 390 0.95
4 23 8.4e-06 0.00071 19.6 1.2 1 23 396 418 396 418 0.99
5 23 0.38 33 4.9 2.2 1 11 424 434 424 435 0.93
6 23 0.43 36 4.7 5.3 1 19 506 524 506 525 0.96
7 23 0.0008 0.068 13.3 0.4 1 23 566 589 566 589 0.94
8 23 0.00024 0.021 15.0 1.7 1 23 621 643 621 643 0.98
9 23 3.9e-05 0.0033 17.4 1.6 1 23 649 672 649 672 0.96
10 23 2.9e-05 0.0025 17.9 0.3 1 23 678 700 678 700 0.98
11 23 2.5e-07 2.1e-05 24.4 0.9 1 23 706 728 706 728 0.98
12 23 4e-06 0.00034 20.6 1.5 1 23 734 756 734 756 0.99
13 23 0.00013 0.011 15.8 2.3 1 23 762 784 762 784 0.96
14 23 2.8e-05 0.0024 17.9 1.3 2 23 791 813 790 813 0.96
15 23 0.0034 0.29 11.4 0.1 2 23 844 866 843 866 0.95
16 23 3.3 2.8e+02 2.0 0.7 1 13 871 883 871 894 0.81
17 23 0.00098 0.083 13.1 1.7 1 23 926 948 926 948 0.99
18 23 9.4e-05 0.008 16.2 0.7 2 23 955 977 954 977 0.94
19 23 0.00032 0.027 14.6 0.0 1 23 983 1005 983 1005 0.97
20 23 0.00076 0.065 13.4 1.2 1 23 1011 1033 1011 1033 0.97
21 23 0.0023 0.2 11.9 9.9 1 23 1039 1061 1039 1061 0.97
22 23 1.9e-05 0.0016 18.4 0.0 1 23 1067 1089 1067 1089 0.96
23 23 0.011 0.91 9.8 3.1 5 23 1098 1116 1096 1117 0.93

Sequence Information

Coding Sequence
ATGGAATCTGAAAGTTCTGTCATGTTGGAATCATGCGGGgaacattcaattttaattcaaacagTAAAAGATATGGTGAATGAGAATACGCGTGCTGAGTTAGAAAATGAGGAAGAAGGATTTTTCGTCGTAACAGATGTTCAGGATGAACAACAAAATATGATAGAAGTATCAAACGAAGAATCGACAGTAACACAGTCCGATGATCAGTTTTCATGGTCTAATTTATGCAGAATATGTGCTAATGTTAATGATCATTTAATTCCAATATTTGATGGAGAAGGTCTACAACATGacttatgtaataaaatacataaatatctaCCAATATGTGTATCTGAAAATGATGCACTCCCGTTGCAATTATGTTATCATTGTGCTGCTACATTATTAGCATGGCACGAACTATCGGAAGGATGCCTGAATGCAGAAAGAAGATTATTGGAGATGCAAGATGCTTTGCAAGAAAAGCAGGGATCAGAAGGATTAGAAACTTCTACACAGGATACATCTGTATCTAATATAACAGAATCACTTCATCAACAGGAAGAAACTGTTGAAAAGGATGAAGTCTCTGGGAATTCAACTATTAATGATTCTGGCAGGTCCAGTAGTATGCGAACACCGTTTAAGATGTTCCTAGATATGCAGAATGTCTTTCGGAAGCCACATAGAAAAAAGTACCAGCTCCAAGAAAGAAAGCCTACAGACAATGGAGATTGCGAATCAGTGTGGATTACCGTCATGAATTCGACGCTTGATCAGCCTGCTATAATGTCTGATCAACTGCAAGACAATGATATCACTATAAAGGAAGAGGTGTCTCAAATGTATAATTCAGACAAtatcgagaaattgaaactggACGATGGGAAGCCAACAGATTCTCCAAATACAAAAAATGGAAGTAAAAAGGCGAGAGGAAAATGTAAAGCTTGTTCGAACAATTCGAAAAGCTCGAGCGATCTTTGCGGACATATGAAGACTAAAGCTAACGTTGACGTTCATGAGTCTTACCAATGCGTCGAATgtggaaaatgtttcaagttgAAGGATTCCTTTCTCAGACACATGAGGATACATACGGATGAAAGGCCGTTCACTTGTCACGTGTGTGGGAAACAATTTAGGGACTCTGGTGGTCTTTCTAGACATTTAAAGGATGTACACGCAAAACTAAAGAATTTCACGTGCGACATATGCAACAAGTCTTTCGCATCGAAAGCTACGAGAGAGGATCATCGTCGAACTCATACCGGCGAGAGACCCTATGTATGTGACTCGTGTGGAAAGACGTTTAAgTTTGGTCTACCTCAGAAGAGATCCTTCGCGGCATATTGCTCGTGGCAGCAAACATTCAATGAGACGAACTtgaaagaaagtagaaaagaaCGAATTAGCGACAATGAGGATAATTCACTCGATAGTTTTTACAATGCAGATCTAGATATGAGAAAAATGGTGAAAGTAATACTACCTcctttaaatgaaattgctaCTTCATTGAAAAACCAATACACGTGCAAACATTGTTGTCGAATCTTCGAAGGGAAATACCATTTGACGCAACATGTACCCAAATGTAAAAGCATGGCTGAAAACTCCACTGAATGCAGCGCATCAAATGCAGAAGATGCAAATAAAGCGGACAAAGATCGAGAAGATttgaaatgtaagaaaaacaaacttgGAACATATCCGTGCATGTACTGCGACTATACGGTGAAGCAAAAGAAACTGTTGGAGTTACATTTATTGGAATCGCACGCGGAGTTTGCCAGAAAGAAGGATAGAAAGTTGAAATGTGCCGACAGAGAAATGGTGATGCGCGCTAAAATGGAGGTCGACGGGAAGATCTATTATCATTGCAACGAGTGTGGGAAGAATCTTTATTCGCCTTACACGTTCTTCTGGCACGTGCGTATACACACCGGAGAACGATCGTACACTTGTCATCTTTGTGGCAAACAGTTTCGCATAAATCAAGGACTGGCGAGACACTTGCGTGACACGCACGCCGGCATAAAGAACTTTCCGTGCGACGTTTGCGGCCGAAtgttttcgacgaaacgaagcgCGGAGGATCACAAACGCATCCATACCGGCGAACGACCGTACATTTGCAACATTTGCGGGAAGTCGTTCAAGCAGAAAGCCTCTCTATTCGTGCACAATCGCAGTCACTCGGACGTTTTCCCctttaaatgtaattactgCGATCAGAACTTTCGGACGAGGCCGTCGCTCGCGTTACACATAAAGAAGCACACCGGCGAGAAACCGCACGCTTGCGATATATGCAGCCGACGTTTCCGTATAAAATACGAGCTGAAACGTCACCGTTTGATTCATTTCGACGACAAACCATGGCAGTGCACAGAGTGCAACCTCTCGTTCCGACAGAAACGCTATTTAGTTAATCATAGGAAAGTTAATCACAATCCGCGGTGGAAGGTCGAGTCTGACACTGTTATGCAAATATCGACGGTTGAAAGCGAGAGTACGAATGTCGAGGAGGTAGAGTACATCCAGTGTGCTCAATGCGACGTTGTCTTCGTGAACATGAAGTACTTTATAGATCACATGAACAACGAGCACGAGGCTCAAATGCACTATTGTCAGTATTGCAAACTGGTGTATCGTGGCCAAGATAAGGATTTTGAAGATCACGTATCGATGCATGATAGCAATTGCAAAGTAAAAGACATCAGCGAGGATGAAAACGAGACAGAGCTTGTAAATAAAGCGAAGCAAATAATCAACGACCGTGTTTCTTACAAGTGCGATACGTGTAAAAAGATCATATTCACGAAACGGGGATTTCTACGCCACATTCGCGTGCATTCTGACAAACGACCTTGCAAGTGCGATCTATGCGGAAAATCGTATCGTATCGAGCAGGATTTAGCCAGACACATACGAGACGTTCACGAGGGATTGAAAAAATACGCCTGCGACATCTGTGGCCGGGCATTTGCGAACAAAGGAGCAAAAGACGATCATCGGAGGATTCACACCGGTGAACGGCCGTACGCGTGCGAACACTGtccaaaaatgtttcgaacTCTGAATTCTATTTACATTCACAATCGCGTACACACGGATTACAAACCTCATAAATGTACGTATTGCGGGAAACATTTCAGAAGCAGGCAGAGGCTGACTCATCATGAAACCACGCATACAGGTATCAAAGCTTTTGCCTGTGAAATCTGTGGTAAAACGTTCTCTGTCAAAGGAGAAGTCGTGCGACATCGCGCTGTACATAACGAAGAGAAACCTTTCGACTGTAAATGTGGAATGAAATTCGGCCAGAAGAGATACCTAAGAAATCATATAAAACAACATCACAAGGAAGCATCTTCGTGGTTACTAGCAGAATTATTGGGAAGTAGTAATTGA
Protein Sequence
MESESSVMLESCGEHSILIQTVKDMVNENTRAELENEEEGFFVVTDVQDEQQNMIEVSNEESTVTQSDDQFSWSNLCRICANVNDHLIPIFDGEGLQHDLCNKIHKYLPICVSENDALPLQLCYHCAATLLAWHELSEGCLNAERRLLEMQDALQEKQGSEGLETSTQDTSVSNITESLHQQEETVEKDEVSGNSTINDSGRSSSMRTPFKMFLDMQNVFRKPHRKKYQLQERKPTDNGDCESVWITVMNSTLDQPAIMSDQLQDNDITIKEEVSQMYNSDNIEKLKLDDGKPTDSPNTKNGSKKARGKCKACSNNSKSSSDLCGHMKTKANVDVHESYQCVECGKCFKLKDSFLRHMRIHTDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFTCDICNKSFASKATREDHRRTHTGERPYVCDSCGKTFKFGLPQKRSFAAYCSWQQTFNETNLKESRKERISDNEDNSLDSFYNADLDMRKMVKVILPPLNEIATSLKNQYTCKHCCRIFEGKYHLTQHVPKCKSMAENSTECSASNAEDANKADKDREDLKCKKNKLGTYPCMYCDYTVKQKKLLELHLLESHAEFARKKDRKLKCADREMVMRAKMEVDGKIYYHCNECGKNLYSPYTFFWHVRIHTGERSYTCHLCGKQFRINQGLARHLRDTHAGIKNFPCDVCGRMFSTKRSAEDHKRIHTGERPYICNICGKSFKQKASLFVHNRSHSDVFPFKCNYCDQNFRTRPSLALHIKKHTGEKPHACDICSRRFRIKYELKRHRLIHFDDKPWQCTECNLSFRQKRYLVNHRKVNHNPRWKVESDTVMQISTVESESTNVEEVEYIQCAQCDVVFVNMKYFIDHMNNEHEAQMHYCQYCKLVYRGQDKDFEDHVSMHDSNCKVKDISEDENETELVNKAKQIINDRVSYKCDTCKKIIFTKRGFLRHIRVHSDKRPCKCDLCGKSYRIEQDLARHIRDVHEGLKKYACDICGRAFANKGAKDDHRRIHTGERPYACEHCPKMFRTLNSIYIHNRVHTDYKPHKCTYCGKHFRSRQRLTHHETTHTGIKAFACEICGKTFSVKGEVVRHRAVHNEEKPFDCKCGMKFGQKRYLRNHIKQHHKEASSWLLAELLGSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00982424;
90% Identity
iTF_00982424; iTF_00983098;
80% Identity
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