Mbee012560.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melipona beecheii
Gene Symbol
zfy1
Assembly
GCA_032399605.1
Location
JAUCMO010000501.1:13762100-13767536[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 1.6 1.3e+02 3.4 2.3 2 22 309 329 309 329 0.95
2 23 8.4e-07 6.9e-05 23.2 3.2 1 23 339 361 339 361 0.99
3 23 2.7e-06 0.00022 21.6 1.1 1 23 367 390 367 390 0.95
4 23 1.3e-05 0.0011 19.5 1.2 1 23 396 418 396 418 0.99
5 23 0.58 48 4.8 2.2 1 11 424 434 424 435 0.93
6 23 0.33 27 5.6 5.6 1 20 506 525 506 525 0.97
7 23 0.0012 0.1 13.3 0.4 1 23 566 589 566 589 0.94
8 23 0.00037 0.031 14.9 1.7 1 23 621 643 621 643 0.98
9 23 6e-05 0.0049 17.4 1.6 1 23 649 672 649 672 0.96
10 23 4.4e-05 0.0036 17.8 0.3 1 23 678 700 678 700 0.98
11 23 3.8e-07 3.1e-05 24.3 0.9 1 23 706 728 706 728 0.98
12 23 1.2e-06 9.9e-05 22.7 2.4 1 23 734 756 734 756 0.99
13 23 0.00019 0.016 15.8 2.3 1 23 762 784 762 784 0.96
14 23 4.4e-05 0.0036 17.8 1.3 2 23 791 813 790 813 0.96
15 23 0.0052 0.43 11.3 0.1 2 23 844 866 843 866 0.95
16 23 1.6e-06 0.00013 22.3 2.8 1 23 937 959 937 959 0.99
17 23 0.0015 0.12 13.0 1.7 1 23 987 1009 987 1009 0.99
18 23 0.00014 0.012 16.2 0.7 2 23 1016 1038 1015 1038 0.94
19 23 0.00048 0.04 14.5 0.0 1 23 1044 1066 1044 1066 0.97
20 23 0.0012 0.096 13.3 1.2 1 23 1072 1094 1072 1094 0.97
21 23 0.0036 0.29 11.8 9.9 1 23 1100 1122 1100 1122 0.97
22 23 3.1e-05 0.0026 18.3 0.0 1 23 1128 1150 1128 1150 0.96
23 23 0.016 1.4 9.7 3.1 5 23 1159 1177 1157 1178 0.93

Sequence Information

Coding Sequence
ATGGAATCTGAAAATTCTGTCATGTTGGAATCATGCGGGGaacattcaattttaattcaaacagTAAAAGATATGGTGAATGAGAATACGTGTGCTGAGTTAGAAAATGAGGAAGAAGGATTTTTCGTCGTAACAGATGTTCAGGATGAACAACAAAATATGATAGAAGTATCAAACGAAGAATCGACAGTAACACAGTCCGATGATCAGTTTTCATGGTCTAATTTATGCAGAATATGTGCTAATGTTAATGATCATTTAATTCCAATATTTGATGGAGAAGGTCTACAACATGacttatgtaataaaatacataaatatctaCCAATATGTGTATCTGAAAATGATGCACTCCCGTTGCAATTATGTTATCATTGTGCTGCTACATTATTAGCATGGCATGAACTGTCGGAAGGATGCCTGAATGCAGAAAGAAGATTATTGGAGATGCAAGATGCTTTGCAAGAAAAGCAGGGATCAGAAGGATTAGAAACTTCTATACAGGATACATCTGTATCTAATATAACAGAATCACTTCATCAACAGCAAGAAACTGTTGAAAAGGATGAAGTCTCTGGGAATTCAACTATTAATGATTCTAGCAGGTCCAGTAGTATGCGAACACCGTTTAAGATGTTCCTAGATATGCAGAATGTCTTTCGGAAGCCACACAGAAAAAAGTGCCAGCTCCAAGAAAGAAAGCCTACAGACAATGGAGATTGCGAATCAGTGTGGATTACCGTCATGAATTCAACGCTTGATCAACCTGCTATAATGTCTGATCAACTGCAAGACAATGATATCACTATAAAGGAAGAGGTGTCTCAAATGTATAATTCAGACAATatcgagaaattgaaactggACGATAGGAAGCCAACAGATTCTCCAAATACAAAAAATGGAAGTAAAAAGGCGAGAGGAAAATGTAAAGCTTGTTCGAACAATTCGAAAAGCTCGAGCGATCTTTGCGGACATATGAAGACTAAAGCTAACGTTGACGTTCAAGAGTCTTACCAATGCGTCGAATgtggaaaatgtttcaagttgAAGGATTCCTTTCTCAGACACATGAGGATACATACGGATGAAAGGCCGTTCACTTGTCACGTGTGTGGGAAACAATTTAGGGACTCTGGCGGTCTTTCTAGACATTTAAAGGACGTACACGCAAAACTGAAGAATTTCACGTGCGACATATGCAATAAGTCTTTCGCATCGAAAGCTACGAGAGAGGATCATCGTCGAACTCATACCGGCGAGAGACCCTATGTATGTGACTCGTGTGGAAAGACGTTTAAgTTTGGTCTACCTCAGAAGAGATCCTTCGCGGCATATTGCTCGTGGCAGCAAACATTCAATGAGACGAACTTaaaagaaagtagaaaagaaCGAATTAGCGACAATGAGGATAATTCACTCGATAGGTTTTACAATGCAGATCTAGATATGAGAAAAATGGTGAAAGTAATACTACCTCctttaaatgaaattgctaCTTCATTGAAAAACCAATACACGTGCAAACACTGTTGTCGTATCTTCGAAGAGAAATACCACTTGACGCAACATATACCCAAATGTAAAAGCGCGGCTGAAAGCTCCACTGAATGCAGCGCATCAAATGCAGAAGATGCAAATAAAGCGAACAAAGATCGAAAAGATttgaaatgtaagaaaaacaAACTTGGAACATATCCGTGCATGTACTGCGACTATACGGTGAAGCAAAAGAAACTGTTGGAGTTACATTTATTGGAATCGCACGCGGAGTTTGCCAGAAAGAAGGATAGAAAGTTGAAATGTGCCGACAGAGAAATGGTGATGCGCGCTAAAATGGAGGTCGACGGGAAGATCTATTATCATTGCAACGAGTGTGGGAAGAATCTCTATTCGCCTTACACGTTCTTCTGGCACGTGCGTATACACACCGGAGAACGATCGTACACTTGTCATCTTTGTGGCAAACAGTTTCGCATAAATCAAGGACTGGCGAGACACTTGCGTGACACGCACGCCGGCATAAAGAACTTTCCGTGCGACGTTTGCGGCCGAAtgttttcgacgaaacgaagcgCCGAGGATCACAAACGCATCCATACCGGCGAACGACCGTACATTTGCAACATTTGCGGGAAGTCGTTCAAGCAGAAAGCCTCTCTGTTCGTGCACAATCGCAGTCACTCGGACGTGTTCCCctttaaatgtaattactgCGATCAGAACTTTCGGACGAGGTCGTCGCTCGCGTTACACATAAAGAAACACACCGGCGAGAAACCGCACGCTTGCGATATATGCAGCCGACGTTTCCGTATAAAATACGAGCTGAAACGTCACCGTTTGATTCATTTCGACGATAAACCGTGGCAGTGCACAGAGTGCAACCTGTCGTTCCGACAGAAACGCTATTTAGTTAATCATAGAAAAGTTAATCACAATCCGCGGTGGAAGGTCGAGTCTGACACTGTTATGCAAATATCGACGGTCGAAAGCGAGAGTACGAACGTCGAGGAAGTAGAGTACATCCAATGTGCTCAATGCGACGTTGTCTTCGTGAACATGAAGTACTTCATAGATCACATGAACAACGAGCACCAGGCTCAAATGCACTATTGTCAGTATTGCAAACTGATGTATCATGGCCAAGATAAGGATTTTGAAGATCACGTATCGATGCATGATAGCAATTGCAAAGTAAAAGACATCAGCGAGGATGAAAGTTTGGAAtgcacgaacgaaacgagaagagaagataAAGATGATAAAAGATCGCCCGATCGGCAGATCATTGAGAAGCCTTTGTGTTACACTTGCAACTTGTGCgagagaaatttcacaaaaaagtCCGAATTGAAGAAGCACATAAACAGACATTCGGATATCAATCCGATTGAGAATCCAGACGAGACAGAGCTTGTAAATAAAGCGAAGCAAATAATCAACGATCGTGTTTCTTACAAGTGCGATACATGTAAAAAGATCATATTCACGAAACGGGGGTTTTTACGCCATATTCGCGTGCATTCTGACAAACGACCTTGCAAGTGCGATCTATGCGGAAAATCGTATCGTATCGAGCAGGATTTAGCCAGACACATACGAGACGTTCACGAGGGATTGAAAAAATACGCCTGCGACATCTGTGGTCGGGCATTTGCGAACAAAGGAGCAAAAGACGATCATCGGAGGATTCACACCGGTGAACGGCCGTACGCGTGCGAACACTGtccaaaaatgtttcgaactCTGAATTCTATTTACATTCACAATCGCGTACACACGGATTATAAACCTCATAAATGCACGTATTGCGGGAAACATTTCAGAAGCAGGCAGAGGCTGACTCATCATGAAACCACGCATACAGGTATCAAAGCTTTTGCCTGTGAAATCTGTGGTAAAACGTTCTCTGTCAAAGGAGAAGTCGTGCGACATCGCGCTATACATAACGAAGAGAAACCTTTCGACTGTAAATGTGGAATGAAATTTGGCCAGAAGAGATACCTAAGAAATCATATAAAACAACATCACAAGGAAGCATCTTCGTGGTTATTAGCAGAATTATTGGGAAGTAGTAATTGA
Protein Sequence
MESENSVMLESCGEHSILIQTVKDMVNENTCAELENEEEGFFVVTDVQDEQQNMIEVSNEESTVTQSDDQFSWSNLCRICANVNDHLIPIFDGEGLQHDLCNKIHKYLPICVSENDALPLQLCYHCAATLLAWHELSEGCLNAERRLLEMQDALQEKQGSEGLETSIQDTSVSNITESLHQQQETVEKDEVSGNSTINDSSRSSSMRTPFKMFLDMQNVFRKPHRKKCQLQERKPTDNGDCESVWITVMNSTLDQPAIMSDQLQDNDITIKEEVSQMYNSDNIEKLKLDDRKPTDSPNTKNGSKKARGKCKACSNNSKSSSDLCGHMKTKANVDVQESYQCVECGKCFKLKDSFLRHMRIHTDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFTCDICNKSFASKATREDHRRTHTGERPYVCDSCGKTFKFGLPQKRSFAAYCSWQQTFNETNLKESRKERISDNEDNSLDRFYNADLDMRKMVKVILPPLNEIATSLKNQYTCKHCCRIFEEKYHLTQHIPKCKSAAESSTECSASNAEDANKANKDRKDLKCKKNKLGTYPCMYCDYTVKQKKLLELHLLESHAEFARKKDRKLKCADREMVMRAKMEVDGKIYYHCNECGKNLYSPYTFFWHVRIHTGERSYTCHLCGKQFRINQGLARHLRDTHAGIKNFPCDVCGRMFSTKRSAEDHKRIHTGERPYICNICGKSFKQKASLFVHNRSHSDVFPFKCNYCDQNFRTRSSLALHIKKHTGEKPHACDICSRRFRIKYELKRHRLIHFDDKPWQCTECNLSFRQKRYLVNHRKVNHNPRWKVESDTVMQISTVESESTNVEEVEYIQCAQCDVVFVNMKYFIDHMNNEHQAQMHYCQYCKLMYHGQDKDFEDHVSMHDSNCKVKDISEDESLECTNETRREDKDDKRSPDRQIIEKPLCYTCNLCERNFTKKSELKKHINRHSDINPIENPDETELVNKAKQIINDRVSYKCDTCKKIIFTKRGFLRHIRVHSDKRPCKCDLCGKSYRIEQDLARHIRDVHEGLKKYACDICGRAFANKGAKDDHRRIHTGERPYACEHCPKMFRTLNSIYIHNRVHTDYKPHKCTYCGKHFRSRQRLTHHETTHTGIKAFACEICGKTFSVKGEVVRHRAIHNEEKPFDCKCGMKFGQKRYLRNHIKQHHKEASSWLLAELLGSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00983720; iTF_00734073; iTF_00983098;
90% Identity
iTF_00983720;
80% Identity
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