Mqua004432.1
Basic Information
- Insect
- Melipona quadrifasciata
- Gene Symbol
- ttk
- Assembly
- GCA_001276565.1
- Location
- KQ435729.1:862983-865092[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.2e-06 0.0021 17.4 0.0 3 38 202 237 200 243 0.78 2 5 3.3e-11 5.8e-08 32.0 0.0 5 39 254 287 251 294 0.85 3 5 0.073 1.3e+02 2.1 0.0 21 34 321 334 307 339 0.80 4 5 6.8e-12 1.2e-08 34.2 0.1 4 39 365 400 362 406 0.92 5 5 2.1 3.8e+03 -2.6 0.0 31 43 407 419 405 420 0.81
Sequence Information
- Coding Sequence
- ATGTCCGAAATTGCTAACCAACATGAGATCAATCAGAGTTATTGGTTCAAATGGAATGATTATCAGAATCATCTTTCCGATGTAGTTAGACAACTTTTAGAGGAAGATTGTATGGTGGATGTTACCCTGGCTGCGGCTGGGGAACGCATTCATGCTCATCGCATAGTTCTTTGTGCTTGTAGCACTTTGTTTCGAgAAATATTAAGCCAAGTAAATGAAGATCAttcaacaataatattaaGCGATATATCTGCTCAAGatataaaatctattatagaatttatttatcatggAGAAGTGAGAGTTCCAGTTGAAAATATCAGTAGTTTATTGGATGCTGCACGCTCGTTAAAGATTTGCGGCCTTAACGAAATTGATGGGCTTGAAGAAACTTACTCTGTTGTGAACAATAggaattttaatgataataacgAAGATTCAATGACTGTAATTGGCAAGGCTGAAGAAAATGTTATTGATGTATTGcaacataataattatgaGGATTTAGAGAATCGACAAAAAGATGAGGTCATTGACAATTCtatgttgaataaaaaaaagaaacgtagacGTGATACAACAAAAAGAGATTACAGCGATGATATGCTGGCATCAGCAATCAATGACTTAAAAGCAGGTCAAACATTAATAGAAGCTTCTACTAAACATAATATACCACGTTCGACTTTGTATATGCGTGCTAAAGCATTAGGTATACATTTAAACGCATCAAGAAACGAATATCCTGCAGAATGTATGAAAGCTGCTATAAATGCTGTAATCGgTGGATCAAGCCTGCAACATGCGTCAGAAACGTTTAGTATACCAAAGACTGTATTATGGAGAAGGATTCAGAAAGAAGGATATCAAATATTACGTTCGGAAATGAAAAGATCTTATGGATCAGATAAACGAGAAGCTGCAGTTAAGGCTttagaaagaggagagaatttaacaaaagttGCACTTGAATTTAAAattccGAAAACTACTTTATTTAGAGATAAAGCACGATTGGTAGATGAAGGAAAATTGCCATTGTCATTTTGGAAGAAACGTAAGACAGAAAATGAAGAGTTAAAAAAGTCTCGTTTAGAAGAAGCTGTTGCTGCTTGTAAAGGAGGGAAAATGTCGCAAGCAGCAGCGTCAATGACATATCATATTCCAAAAACAACAATATGGAGACGTCTTCAACAAGATGGTAAAAAGTCAGAGCGTTCGTTAAACTCGAGGAAGCAAAGAATAACAGATTCTAAACATAACATAGAAATGAAGGTAGAGGAAGGTTCTGATTTTACATATTGCGAGgtTTCATCAGAAATTCCTATAACTTATATAGATGAAAATAGTATACCTGGAGATTCTGTGATAATATTAACAGCAGAAGATATGGATGGACTGAATCTAGAGGAAGGgcgacaaattattgttaacTCAGTATGttttttatctgtttatttttaa
- Protein Sequence
- MSEIANQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHSTIILSDISAQDIKSIIEFIYHGEVRVPVENISSLLDAARSLKICGLNEIDGLEETYSVVNNRNFNDNNEDSMTVIGKAEENVIDVLQHNNYEDLENRQKDEVIDNSMLNKKKKRRRDTTKRDYSDDMLASAINDLKAGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASETFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERSLNSRKQRITDSKHNIEMKVEEGSDFTYCEVSSEIPITYIDENSIPGDSVIILTAEDMDGLNLEEGRQIIVNSVCFLSVYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00983685;