Mbee016791.1
Basic Information
- Insect
- Melipona beecheii
- Gene Symbol
- ttk
- Assembly
- GCA_032399605.1
- Location
- JAUCMO010000507.1:13758695-13760964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.7e-06 0.0031 17.3 0.0 3 38 201 236 199 242 0.78 2 5 3.4e-10 6e-07 29.2 0.0 7 39 255 286 252 293 0.86 3 5 0.1 1.8e+02 2.0 0.0 21 34 320 333 306 338 0.80 4 5 9.8e-12 1.7e-08 34.1 0.1 4 39 364 399 361 405 0.92 5 5 3 5.4e+03 -2.7 0.0 31 43 406 418 404 419 0.81
Sequence Information
- Coding Sequence
- ATGTCCGAAATTGCTAACCAACATGAGATCAATCAGAGTTATTGGTTCAAATGGAATGATTATCAGAATCATCTTTCCGATGTAGTTAGACAACTTTTAGAAGAAGATTGTATGGTGGACGTTACCCTGGCTGCGGCTGGGGAACGCATTCATGCTCATCGCATAGTTCTTTGTGCTTGTAGCACTTTGTTTCGAgAAATATTGAGCCAAGGAAATGAAGATCAttcaacaataatattaaGCGATATATCTGCTCAAGATATAAAGTctattatagaatttatttaccaTGGAGAAGTGAGAGTTCCAGTTGAAAATATCAGTAGTTTATTGGATGCTGCacgctcgttaaaaatttgcgGCCTTAACGAAATTGATGGGCTTGAAGAAACTTACTCTGTTGTGAACAATAggaattttaatgataataacgGAGATTCAATGACTGTAATTGGCAAGGCCGaagaaaatgttattgatGTATTGCAACATAATTATGAGGATTTAGAGAATCAACAAAAAGATGAGGTTATTGAGAGTTCtatgttgaataaaaaaaagaaacgtagacGTGATACAACAAAAAGAGATTACAGCGATGATATGCTGGCATCAGCAATCAATGACTTAAAAGCAGGTCAAACATTAATAGAAGCTTCTACTAAACATAATATACCACGTTCGACTTTGTATATGCGTGCTAAAGCATTAGGTATACATTTAAACGCATCAAGAAACGAATATCCTGCAGAATGTGTGAAAGCTGCTATAAATGCTGTAATCGgtGGATCAAGCCTGCAACATGCGTCAGAAACGTTTAGTATACCAAAGACTGTATTATGGAGAAGGATTCAGAAAGAAGGATATCAAATATTACGTTCGGAAATGAAAAAGTCTTATGGATCAGATAAACGAGAAGCTGCAGTTAAGGCTttagaaagaggagaaaatttaacaaaagttGCACTTGAATTTAAAattccGAAAACTACTTTATTTAGAGATAAAGCACGATTGGTAGATGAAGGAAAATTGCCATTGTCATTTTGGAAGAAACGTAAGACAGAAAATGAAGAGTTAAAAAAGTCTCGTTTAGAAGAAGCTGTTGCTGCTTGTAAAGGAGGGAAAATGTCGCAAGCAGCAGCGTCAATGACATATCATATTCCAAAAACAACAATATGGAGACGTCTCCAACAAGATGGTAAAAAGTCAGAGCGTTCGTTAAATTCGAGGAAGCAAAGAATAACAGATTCTAAACATAACATAGAAATGAAGGTAGAGGAAGGCTCTGATTTTACATATTGCGAGgtTTCATCGGAAATTCCTATAACTTATATAGATGAAAATAGTATACCTGGAGATTCTGTGATAATATTAACAGCAGAAGATATGGATGGACTGAATCTAGAGGAAGGgcgacaaattattgttaacTCAGAATCAGGGCAAGAGTATATTCCTTGTGCTATAAGtatcgaagaaaattcaaattattcacAAACAGAAAGTTag
- Protein Sequence
- MSEIANQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQGNEDHSTIILSDISAQDIKSIIEFIYHGEVRVPVENISSLLDAARSLKICGLNEIDGLEETYSVVNNRNFNDNNGDSMTVIGKAEENVIDVLQHNYEDLENQQKDEVIESSMLNKKKKRRRDTTKRDYSDDMLASAINDLKAGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECVKAAINAVIGGSSLQHASETFSIPKTVLWRRIQKEGYQILRSEMKKSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERSLNSRKQRITDSKHNIEMKVEEGSDFTYCEVSSEIPITYIDENSIPGDSVIILTAEDMDGLNLEEGRQIIVNSESGQEYIPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00982383;