Mpro021250.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_964023965.1
- Location
- OZ030392.1:4251307-4265953[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-110 4.4e-105 352.9 32.3 1 300 149 445 149 445 0.94 2 2 0.1 5.9e+03 -2.1 4.9 122 167 445 490 443 511 0.64
Sequence Information
- Coding Sequence
- ATGGAAAGAAGCGACAGTACAGACTCCCTTGAAGACATCCTCAATGGACTCGAATCAGGGAGCGATGAAGAGAACTTCAACGTTGAACAGACCAGAAAAATTCCCAACGAACCATCCAAAGACGTTTTGGACACCGGTCAGCCCAAAACCCAAGAAGATTCCCCCATTGAACTTCAAGCATCACCAATAGAGACTATTCAAGAAGCCAAGGAGGCACACGATGCTCCTCCAGTAGTTTTAGAGTGTCTTAATCCTAACTTAACTCCACCAGAGGAAGCTAAAACTAGTGACAAAGTGACCAAAACTTTAGAGGGTGTGACAGAGACGGAGTCTAGTGATTTTGAGACTGTCATCAAAGGTGCAAAGACGAGTAGGAGTCAGAGTATTTGTTCGCATGGCGACGACGATGTTATCAACCAATTCTTGGATAAGACCATGGAGAATgCGGAGGCTCGCATGTTGGCGAAGAGACAGGCTCGAGCAGAGGCTAGGGAGATCCGCATGCGTGAGCTGGAGCGGCAGCAGAAGGAGCAGGAGGAAAATGCTGATAGGCAGTTCGATATGCTCGCAGAACCGGTGGTGAGGACGCCGATAAGGACGCAGACGTCCAGGTACCTTTCGAGTAGGAGGAGTTCGGAAGACTCGCTTGAGGATGGAGGAAGTTTACGAGAAATACGGCACGAACTCAAAGAGGTTGAGGAGAAATTCAGGAAGGCCATGGTGGCAAACGCCCAGCTTGACAATGACAAAGCCTCGCAGACATATCAACTAGAGCTTCTCAAAGACAGATTAGAGGAGTTAGAAGAGGAACATTCGCAATTAAGGAGGGAACATAGGGATAAGTGTAGGGAACACGATCAGTTGAAAAGGCAGGCCGATAGGCTTAAAGATGACCTGGCCGTTACGCAGTCAGAATTGGAAGAACGGGATAGACTCATAGCCGAGAAGGGGCTCATTATTGTCGGGGAGGACCCCCCTCCCGGCGATGAGTCCAGCACCTCGGAGGTTGTGGTCAACGGGCTCGGAACGCCTAAGAAAGCTCTCGTCAAGGTGGAGAACGCTCAATTGCTAGAGACAGCCGGAGAAGGAAGTTTAGatGTCCGGCTGGCAAGATTTGCAAAAGAAAAGAGTGAACTCCAAGACCAGATTAGTCACCTAAAGTTAGAGCTAGAGGAGGAGCGCAGCAAAAGACGGAAGTCGAACGCTTCAGGCATAACATTGAACGGCCCAACGTCCGATTCAGATTATGATGCCGCTGATGTCCAGAGAGAAATTAGTAAACAATTAGCCGAGTACAAGTTCCGGGCGCAAAAAGCCGAACAAGATGCGGCGACGCTGCAGGCAAACGTCGCTAGGTTAGAAAGTCAGGTGATACGGTATAAAGCTGCCTCGGAGGTATCAGAAAAGTCGGAAGAAGCTTTGAAAGCCgagaagaggaaattgcagagagAGGCTCGGGAAGCTATGAATAGAGCGGAAGAACTAGAAACGTCAAACACGCACTTACTGAAGAGATTGGACAAACTGAAGAACGCAAAATCGGCGTTGCTCAAAGAACTCTGA
- Protein Sequence
- MERSDSTDSLEDILNGLESGSDEENFNVEQTRKIPNEPSKDVLDTGQPKTQEDSPIELQASPIETIQEAKEAHDAPPVVLECLNPNLTPPEEAKTSDKVTKTLEGVTETESSDFETVIKGAKTSRSQSICSHGDDDVINQFLDKTMENAEARMLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPVVRTPIRTQTSRYLSSRRSSEDSLEDGGSLREIRHELKEVEEKFRKAMVANAQLDNDKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREHDQLKRQADRLKDDLAVTQSELEERDRLIAEKGLIIVGEDPPPGDESSTSEVVVNGLGTPKKALVKVENAQLLETAGEGSLDVRLARFAKEKSELQDQISHLKLELEEERSKRRKSNASGITLNGPTSDSDYDAADVQREISKQLAEYKFRAQKAEQDAATLQANVARLESQVIRYKAASEVSEKSEEALKAEKRKLQREAREAMNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137941; iTF_00136873;
- 90% Identity
- iTF_00137941;
- 80% Identity
- -